RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.58□□□□□ -0.72
NFKB1-201ENST00000226574 B4DSR2 109 aa10.58□□□□□ -0.72
NFKB1-201ENST00000226574 IGHV4-38-2P0DP08 117 aa10.58□□□□□ -0.72
NFKB1-201ENST00000226574 Q6ZQT7 251 aa10.58□□□□□ -0.72
NFKB1-201ENST00000226574 IGLV2-11P01706 119 aa10.58□□□□□ -0.72
NFKB1-201ENST00000226574 MYCNOSP40205 109 aa10.58□□□□□ -0.72
NFKB1-201ENST00000226574 NRGNQ92686 78 aa10.58□□□□□ -0.72
NFKB1-201ENST00000226574 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
NFKB1-201ENST00000226574 LINC00574Q9H8X3 128 aa10.57□□□□□ -0.72
NFKB1-201ENST00000226574 IGHV1OR15-1A0A075B7D0 117 aa10.57□□□□□ -0.72
NFKB1-201ENST00000226574 NDUFA4O00483 81 aa10.57□□□□□ -0.72
NFKB1-201ENST00000226574 SLC25A20O43772 301 aa10.57□□□□□ -0.72
NFKB1-201ENST00000226574 TCTEX1D4Q5JR98 221 aa10.57□□□□□ -0.72
NFKB1-201ENST00000226574 PPDPFLQ8WWR9 84 aa10.57□□□□□ -0.72
NFKB1-201ENST00000226574 MAPKAPK5-AS1Q8N8E1 139 aa10.57□□□□□ -0.72
NFKB1-201ENST00000226574 NPBQ8NG41 125 aa10.57□□□□□ -0.72
NFKB1-201ENST00000226574 AJUBAQ96IF1 538 aa10.57□□□□□ -0.72
NFKB1-201ENST00000226574 RBAKDNA6NC62 111 aa10.56□□□□□ -0.72
NFKB1-201ENST00000226574 MSMBP08118 114 aa10.56□□□□□ -0.72
NFKB1-201ENST00000226574 DAND5Q8N907 189 aa10.56□□□□□ -0.72
NFKB1-201ENST00000226574 GATD1Q8NB37 220 aa10.56□□□□□ -0.72
NFKB1-201ENST00000226574 FASNP49327 2511 aaKnown RBP10.56□□□□□ -0.72
NFKB1-201ENST00000226574 RNF223E7ERA6 249 aa10.56□□□□□ -0.72
NFKB1-201ENST00000226574 PAX4O43316 350 aa10.56□□□□□ -0.72
NFKB1-201ENST00000226574 ATXN8Q156A1 80 aa10.56□□□□□ -0.72
NFKB1-201ENST00000226574 TRPT1Q86TN4 253 aaKnown RBP10.56□□□□□ -0.72
NFKB1-201ENST00000226574 C20orf78Q9BR46 151 aa10.56□□□□□ -0.72
NFKB1-201ENST00000226574 IGHV4-61A0A0C4DH41 118 aa10.56□□□□□ -0.72
NFKB1-201ENST00000226574 EPG5Q9HCE0 2579 aa10.56□□□□□ -0.72
NFKB1-201ENST00000226574 A4D1N5 150 aa10.55□□□□□ -0.72
NFKB1-201ENST00000226574 IGHV4-59P01825 116 aa10.55□□□□□ -0.72
NFKB1-201ENST00000226574 C2orf91Q6ZV80 131 aa10.55□□□□□ -0.72
NFKB1-201ENST00000226574 ATP6V0BQ99437 205 aa10.55□□□□□ -0.72
NFKB1-201ENST00000226574 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-201ENST00000226574 IGKV2-29A2NJV5 120 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-201ENST00000226574 GAGE12JA6NER3 117 aa10.55□□□□□ -0.72
NFKB1-201ENST00000226574 C11orf86A6NJI1 115 aa10.55□□□□□ -0.72
NFKB1-201ENST00000226574 GAGE4Q13068 117 aa10.55□□□□□ -0.72
NFKB1-201ENST00000226574 GAGE5Q13069 117 aa10.55□□□□□ -0.72
NFKB1-201ENST00000226574 IGHV7-4-1A0A0J9YVY3 117 aa10.55□□□□□ -0.72
NFKB1-201ENST00000226574 ZNRF2Q8NHG8 242 aa10.55□□□□□ -0.72
NFKB1-201ENST00000226574 TMEM190Q8WZ59 177 aa10.54□□□□□ -0.72
NFKB1-201ENST00000226574 PEMTQ9UBM1 199 aa10.54□□□□□ -0.72
NFKB1-201ENST00000226574 G3V4G9 280 aa10.54□□□□□ -0.72
NFKB1-201ENST00000226574 I3L3M4 83 aa10.53□□□□□ -0.72
NFKB1-201ENST00000226574 DEFB130BP0DP73 79 aa10.53□□□□□ -0.72
NFKB1-201ENST00000226574 DEFB130AP0DP74 79 aa10.53□□□□□ -0.72
NFKB1-201ENST00000226574 SUMO4Q6EEV6 95 aa10.53□□□□□ -0.72
NFKB1-201ENST00000226574 ZNF493Q6ZR52 646 aa10.53□□□□□ -0.72
NFKB1-201ENST00000226574 PFN2P35080 140 aa10.53□□□□□ -0.72
NFKB1-201ENST00000226574 RPL36AP83881 106 aaKnown RBP10.53□□□□□ -0.72
NFKB1-201ENST00000226574 ZFP2Q6ZN57 461 aa10.53□□□□□ -0.72
NFKB1-201ENST00000226574 RPL36ALQ969Q0 106 aaKnown RBP10.53□□□□□ -0.72
NFKB1-201ENST00000226574 CEMP1Q6PRD7 247 aaPredicted RBP10.53□□□□□ -0.72
NFKB1-201ENST00000226574 BAALCQ8WXS3 180 aa10.53□□□□□ -0.72
NFKB1-201ENST00000226574 ZNF415Q09FC8 603 aa10.52□□□□□ -0.72
NFKB1-201ENST00000226574 YAE1D1Q9NRH1 226 aa10.52□□□□□ -0.72
NFKB1-201ENST00000226574 EXPH5Q8NEV8 1989 aa10.52□□□□□ -0.73
NFKB1-201ENST00000226574 B5MCH6 92 aa10.52□□□□□ -0.73
NFKB1-201ENST00000226574 PF4P02776 101 aa10.52□□□□□ -0.73
NFKB1-201ENST00000226574 NSUN5P1Q3KNT7 163 aa10.52□□□□□ -0.73
NFKB1-201ENST00000226574 SPAG8Q99932 426 aaPredicted RBP10.52□□□□□ -0.73
NFKB1-201ENST00000226574 MDFICQ9P1T7 246 aa10.52□□□□□ -0.73
NFKB1-201ENST00000226574 TAL2Q16559 108 aa10.52□□□□□ -0.73
NFKB1-201ENST00000226574 MORN3Q6PF18 240 aaPredicted RBP10.52□□□□□ -0.73
NFKB1-201ENST00000226574 CCDC140Q96MF4 163 aa10.52□□□□□ -0.73
NFKB1-201ENST00000226574 ADORA2A-AS1P86434 159 aa10.51□□□□□ -0.73
NFKB1-201ENST00000226574 C3orf56Q8N813 242 aa10.51□□□□□ -0.73
NFKB1-201ENST00000226574 SMAD5-AS1Q9Y6J3 95 aa10.51□□□□□ -0.73
NFKB1-201ENST00000226574 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
NFKB1-201ENST00000226574 CFC1BP0CG36 223 aa10.51□□□□□ -0.73
NFKB1-201ENST00000226574 CFC1P0CG37 223 aa10.51□□□□□ -0.73
NFKB1-201ENST00000226574 COPS9Q8WXC6 57 aa10.51□□□□□ -0.73
NFKB1-201ENST00000226574 ZNF462Q96JM2 2506 aa10.51□□□□□ -0.73
NFKB1-201ENST00000226574 TMEM141Q96I45 108 aa10.51□□□□□ -0.73
NFKB1-201ENST00000226574 LGALS1P09382 135 aaKnown RBP10.5□□□□□ -0.73
NFKB1-201ENST00000226574 APRG1Q8IVJ8 170 aa10.5□□□□□ -0.73
NFKB1-201ENST00000226574 MUSTN1Q8IVN3 82 aa10.5□□□□□ -0.73
NFKB1-201ENST00000226574 C11orf21Q9P2W6 132 aa10.5□□□□□ -0.73
NFKB1-201ENST00000226574 CRYGBP07316 175 aa10.5□□□□□ -0.73
NFKB1-201ENST00000226574 GAGE2AQ6NT46 116 aa10.5□□□□□ -0.73
NFKB1-201ENST00000226574 Q8N1Y9 231 aa10.5□□□□□ -0.73
NFKB1-201ENST00000226574 HIST2H2BDQ6DRA6 164 aa10.5□□□□□ -0.73
NFKB1-201ENST00000226574 DEFB112Q30KQ8 113 aa10.49□□□□□ -0.73
NFKB1-201ENST00000226574 H3BMM0 161 aa10.49□□□□□ -0.73
NFKB1-201ENST00000226574 C16orf54Q6UWD8 224 aa10.49□□□□□ -0.73
NFKB1-201ENST00000226574 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
NFKB1-201ENST00000226574 C5orf56Q8N8D9 126 aa10.49□□□□□ -0.73
NFKB1-201ENST00000226574 USP34Q70CQ2 3546 aa10.49□□□□□ -0.73
NFKB1-201ENST00000226574 IGHV4-30-2A0A087WSY4 118 aa10.48□□□□□ -0.73
NFKB1-201ENST00000226574 C6orf226Q5I0X4 101 aa10.48□□□□□ -0.73
NFKB1-201ENST00000226574 HIST1H4AP62805 103 aaKnown RBP10.48□□□□□ -0.73
NFKB1-201ENST00000226574 RNF185Q96GF1 192 aa10.48□□□□□ -0.73
NFKB1-201ENST00000226574 BOD1L1Q8NFC6 3051 aa10.48□□□□□ -0.73
NFKB1-201ENST00000226574 CRPP02741 224 aa10.48□□□□□ -0.73
NFKB1-201ENST00000226574 P0DMU3 169 aa10.48□□□□□ -0.73
NFKB1-201ENST00000226574 FAM231AP0DMU4 169 aa10.48□□□□□ -0.73
NFKB1-201ENST00000226574 FAM231CP0DMU5 169 aa10.48□□□□□ -0.73
NFKB1-201ENST00000226574 CARD19Q96LW7 228 aa10.48□□□□□ -0.73
NFKB1-201ENST00000226574 HIGD1BQ9P298 99 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms