RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 PMVKQ15126 192 aa12.94□□□□□ -0.34
H2AFV-201ENST00000222690 C2CD3Q4AC94 2353 aa12.94□□□□□ -0.34
H2AFV-201ENST00000222690 Q1RN00 199 aa12.93□□□□□ -0.34
H2AFV-201ENST00000222690 A0A1B0GV72 72 aa12.93□□□□□ -0.34
H2AFV-201ENST00000222690 KLK9Q9UKQ9 250 aa12.93□□□□□ -0.34
H2AFV-201ENST00000222690 IGHV1-69DA0A0B4J2H0 117 aa12.92□□□□□ -0.34
H2AFV-201ENST00000222690 IGHV1-69P01742 117 aa12.92□□□□□ -0.34
H2AFV-201ENST00000222690 CRYGDP07320 174 aa12.92□□□□□ -0.34
H2AFV-201ENST00000222690 NBL1P41271 181 aa12.92□□□□□ -0.34
H2AFV-201ENST00000222690 PRO0461Q9UI25 63 aa12.92□□□□□ -0.34
H2AFV-201ENST00000222690 VCYO14598 125 aa12.92□□□□□ -0.34
H2AFV-201ENST00000222690 FOXI1Q12951 378 aa12.92□□□□□ -0.34
H2AFV-201ENST00000222690 TRAV2A0A0B4J234 112 aa12.92□□□□□ -0.34
H2AFV-201ENST00000222690 CACNA1AO00555 2505 aa12.92□□□□□ -0.34
H2AFV-201ENST00000222690 NACAE9PAV3 2078 aa12.92□□□□□ -0.34
H2AFV-201ENST00000222690 DAZ1Q9NQZ3 744 aaKnown RBP12.91□□□□□ -0.34
H2AFV-201ENST00000222690 BEX4Q9NWD9 120 aaPredicted RBP12.91□□□□□ -0.34
H2AFV-201ENST00000222690 RNF223E7ERA6 249 aa12.91□□□□□ -0.34
H2AFV-201ENST00000222690 TSHBP01222 138 aa12.91□□□□□ -0.34
H2AFV-201ENST00000222690 POLQO75417 2590 aa12.91□□□□□ -0.34
H2AFV-201ENST00000222690 ABCA2Q9BZC7 2435 aa12.91□□□□□ -0.34
H2AFV-201ENST00000222690 CENPEQ02224 2701 aa12.91□□□□□ -0.34
H2AFV-201ENST00000222690 CKS1BP61024 79 aa12.91□□□□□ -0.34
H2AFV-201ENST00000222690 TSPEAR-AS2P59090 65 aa12.9□□□□□ -0.34
H2AFV-201ENST00000222690 C1QTNF4Q9BXJ3 329 aa12.9□□□□□ -0.34
H2AFV-201ENST00000222690 MYO9AB2RTY4 2548 aa12.9□□□□□ -0.34
H2AFV-201ENST00000222690 IGHV3-73A0A0B4J1V6 119 aa12.9□□□□□ -0.34
H2AFV-201ENST00000222690 A0A0J9YY99 117 aa12.9□□□□□ -0.34
H2AFV-201ENST00000222690 ATP6V0BQ99437 205 aa12.9□□□□□ -0.34
H2AFV-201ENST00000222690 SOCS3O14543 225 aa12.9□□□□□ -0.34
H2AFV-201ENST00000222690 ID1P41134 155 aa12.9□□□□□ -0.34
H2AFV-201ENST00000222690 MDFICQ9P1T7 246 aa12.9□□□□□ -0.34
H2AFV-201ENST00000222690 ACACBO00763 2458 aa12.9□□□□□ -0.35
H2AFV-201ENST00000222690 IGLV4-69A0A075B6H9 119 aa12.89□□□□□ -0.35
H2AFV-201ENST00000222690 CFAP126Q5VTH2 177 aa12.89□□□□□ -0.35
H2AFV-201ENST00000222690 NDUFA11Q86Y39 141 aa12.89□□□□□ -0.35
H2AFV-201ENST00000222690 USP9XQ93008 2570 aaPredicted RBP12.89□□□□□ -0.35
H2AFV-201ENST00000222690 FAM208BQ5VWN6 2430 aa12.89□□□□□ -0.35
H2AFV-201ENST00000222690 LYRM7Q5U5X0 104 aa12.89□□□□□ -0.35
H2AFV-201ENST00000222690 NFE4Q86UQ8 179 aa12.89□□□□□ -0.35
H2AFV-201ENST00000222690 IGHV4-61A0A0C4DH41 118 aa12.89□□□□□ -0.35
H2AFV-201ENST00000222690 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
H2AFV-201ENST00000222690 SMCPP49901 116 aaPredicted RBP12.89□□□□□ -0.35
H2AFV-201ENST00000222690 SPATA25Q9BR10 227 aa12.89□□□□□ -0.35
H2AFV-201ENST00000222690 J3QQQ9 107 aa12.88□□□□□ -0.35
H2AFV-201ENST00000222690 TCL1BO95988 128 aa12.88□□□□□ -0.35
H2AFV-201ENST00000222690 SPINK13Q1W4C9 94 aa12.88□□□□□ -0.35
H2AFV-201ENST00000222690 PAPPA-AS1Q5QFB9 102 aa12.88□□□□□ -0.35
H2AFV-201ENST00000222690 DUX5Q96PT3 197 aa12.88□□□□□ -0.35
H2AFV-201ENST00000222690 VPS13CQ709C8 3753 aa12.88□□□□□ -0.35
H2AFV-201ENST00000222690 ADARB2-AS1A8MUL3 147 aa12.88□□□□□ -0.35
H2AFV-201ENST00000222690 IGHV4-39P01824 125 aa12.88□□□□□ -0.35
H2AFV-201ENST00000222690 ZNRF2Q8NHG8 242 aa12.88□□□□□ -0.35
H2AFV-201ENST00000222690 COX6B1P14854 86 aa12.88□□□□□ -0.35
H2AFV-201ENST00000222690 USMG5Q96IX5 58 aa12.88□□□□□ -0.35
H2AFV-201ENST00000222690 C19orf84I3L1E1 186 aa12.87□□□□□ -0.35
H2AFV-201ENST00000222690 PRSS2P07478 247 aa12.87□□□□□ -0.35
H2AFV-201ENST00000222690 IGIPA6NJ69 53 aa12.87□□□□□ -0.35
H2AFV-201ENST00000222690 UBE2D1P51668 147 aa12.87□□□□□ -0.35
H2AFV-201ENST00000222690 A8MWV9 139 aa12.86□□□□□ -0.35
H2AFV-201ENST00000222690 CFC1BP0CG36 223 aa12.86□□□□□ -0.35
H2AFV-201ENST00000222690 CFC1P0CG37 223 aa12.86□□□□□ -0.35
H2AFV-201ENST00000222690 CRYBG3Q68DQ2 2970 aa12.86□□□□□ -0.35
H2AFV-201ENST00000222690 MT-ATP8P03928 68 aa12.85□□□□□ -0.35
H2AFV-201ENST00000222690 POLR2KP53803 58 aaKnown RBP12.85□□□□□ -0.35
H2AFV-201ENST00000222690 RNASE13Q5GAN3 156 aaKnown RBP12.85□□□□□ -0.35
H2AFV-201ENST00000222690 LINC00315P59091 139 aa12.85□□□□□ -0.35
H2AFV-201ENST00000222690 TLN2Q9Y4G6 2542 aa12.85□□□□□ -0.35
H2AFV-201ENST00000222690 CUBNO60494 3623 aa12.85□□□□□ -0.35
H2AFV-201ENST00000222690 A4D1N5 150 aa12.85□□□□□ -0.35
H2AFV-201ENST00000222690 LINC01619G3V211 115 aa12.85□□□□□ -0.35
H2AFV-201ENST00000222690 C10orf99Q6UWK7 81 aa12.85□□□□□ -0.35
H2AFV-201ENST00000222690 PRO1854Q9UHT4 67 aa12.85□□□□□ -0.35
H2AFV-201ENST00000222690 C9JAW5 83 aa12.84□□□□□ -0.35
H2AFV-201ENST00000222690 ZNF876PQ49A33 203 aa12.84□□□□□ -0.35
H2AFV-201ENST00000222690 KIF25-AS1Q9Y6Z4 181 aa12.84□□□□□ -0.35
H2AFV-201ENST00000222690 SCGB1A1P11684 91 aa12.84□□□□□ -0.35
H2AFV-201ENST00000222690 NPC2P61916 151 aa12.84□□□□□ -0.35
H2AFV-201ENST00000222690 Q8N1Y9 231 aa12.84□□□□□ -0.35
H2AFV-201ENST00000222690 SPXQ9BT56 116 aa12.84□□□□□ -0.35
H2AFV-201ENST00000222690 TMEM141Q96I45 108 aa12.84□□□□□ -0.35
H2AFV-201ENST00000222690 MED14OSP0DP75 135 aa12.83□□□□□ -0.36
H2AFV-201ENST00000222690 UCNP55089 124 aa12.83□□□□□ -0.36
H2AFV-201ENST00000222690 C10orf126Q8N4M7 172 aa12.83□□□□□ -0.36
H2AFV-201ENST00000222690 MYO18BQ8IUG5 2567 aa12.83□□□□□ -0.36
H2AFV-201ENST00000222690 A0A0J9YXV3 536 aa12.83□□□□□ -0.36
H2AFV-201ENST00000222690 TRPT1Q86TN4 253 aaKnown RBP12.83□□□□□ -0.36
H2AFV-201ENST00000222690 PIMREGQ9BSJ6 248 aa12.83□□□□□ -0.36
H2AFV-201ENST00000222690 VCX2Q9H322 139 aa12.83□□□□□ -0.36
H2AFV-201ENST00000222690 SETD2Q9BYW2 2564 aaPredicted RBP12.83□□□□□ -0.36
H2AFV-201ENST00000222690 IGHV3-30P01768 117 aa12.83□□□□□ -0.36
H2AFV-201ENST00000222690 IGHG2P01859 326 aa12.83□□□□□ -0.36
H2AFV-201ENST00000222690 IGHV3-30-5P0DP03 117 aa12.83□□□□□ -0.36
H2AFV-201ENST00000222690 ZNF580Q9UK33 172 aa12.83□□□□□ -0.36
H2AFV-201ENST00000222690 ATP5J2P56134 94 aa12.82□□□□□ -0.36
H2AFV-201ENST00000222690 KLK9Q2XQG4 91 aa12.82□□□□□ -0.36
H2AFV-201ENST00000222690 SNRPD3P62318 126 aaKnown RBP12.82□□□□□ -0.36
H2AFV-201ENST00000222690 SLC25A29Q8N8R3 303 aa12.82□□□□□ -0.36
H2AFV-201ENST00000222690 PPDPFLQ8WWR9 84 aa12.82□□□□□ -0.36
H2AFV-201ENST00000222690 IGHV4OR15-8A0A075B7B6 117 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms