RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 LTAP01374 205 aa14.68□□□□□ -0.06
VTI1B-201ENST00000216456 RPL19P84098 196 aaKnown RBP14.68□□□□□ -0.06
VTI1B-201ENST00000216456 PIK3CD-AS1Q5SR53 167 aa14.68□□□□□ -0.06
VTI1B-201ENST00000216456 DNLZQ5SXM8 178 aa14.68□□□□□ -0.06
VTI1B-201ENST00000216456 OR11H4Q8NGC9 324 aa14.68□□□□□ -0.06
VTI1B-201ENST00000216456 NKX6-2Q9C056 277 aaPredicted RBP14.68□□□□□ -0.06
VTI1B-201ENST00000216456 ZFP30Q9Y2G7 519 aa14.68□□□□□ -0.06
VTI1B-201ENST00000216456 MYCBP2O75592 4640 aa14.67□□□□□ -0.06
VTI1B-201ENST00000216456 AKR1C3P42330 323 aa14.66□□□□□ -0.06
VTI1B-201ENST00000216456 LINC01559Q495D7 138 aa14.66□□□□□ -0.06
VTI1B-201ENST00000216456 SYT8Q8NBV8 401 aa14.66□□□□□ -0.06
VTI1B-201ENST00000216456 FRZBQ92765 325 aa14.66□□□□□ -0.06
VTI1B-201ENST00000216456 SFRP2Q96HF1 295 aa14.66□□□□□ -0.06
VTI1B-201ENST00000216456 PHLDA3Q9Y5J5 127 aa14.66□□□□□ -0.06
VTI1B-201ENST00000216456 SRRM2Q9UQ35 2752 aaKnown RBP14.66□□□□□ -0.06
VTI1B-201ENST00000216456 LAGE3Q14657 143 aa14.65□□□□□ -0.06
VTI1B-201ENST00000216456 KCNRGQ8N5I3 272 aa14.65□□□□□ -0.06
VTI1B-201ENST00000216456 FAM213BQ8TBF2 198 aa14.65□□□□□ -0.06
VTI1B-201ENST00000216456 NTN5Q8WTR8 489 aaPredicted RBP14.65□□□□□ -0.06
VTI1B-201ENST00000216456 SFT2D1Q8WV19 159 aa14.65□□□□□ -0.06
VTI1B-201ENST00000216456 MUC21A0A0G2JKD1 596 aa14.64□□□□□ -0.07
VTI1B-201ENST00000216456 TRBV6-1A0A0K0K1D8 114 aa14.64□□□□□ -0.07
VTI1B-201ENST00000216456 MUC21A0A140T8X8 626 aa14.64□□□□□ -0.07
VTI1B-201ENST00000216456 SCO2A0A1W2PP80 73 aa14.64□□□□□ -0.07
VTI1B-201ENST00000216456 TPT1P13693 172 aaKnown RBP14.64□□□□□ -0.07
VTI1B-201ENST00000216456 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.63□□□□□ -0.07
VTI1B-201ENST00000216456 RHODO00212 210 aa14.63□□□□□ -0.07
VTI1B-201ENST00000216456 LINC01620Q4KN68 170 aa14.63□□□□□ -0.07
VTI1B-201ENST00000216456 STOML3Q8TAV4 291 aa14.63□□□□□ -0.07
VTI1B-201ENST00000216456 BAALCQ8WXS3 180 aa14.63□□□□□ -0.07
VTI1B-201ENST00000216456 NIT1Q86X76 327 aa14.62□□□□□ -0.07
VTI1B-201ENST00000216456 FLG2Q5D862 2391 aaPredicted RBP14.61□□□□□ -0.07
VTI1B-201ENST00000216456 OR10AG1Q8NH19 301 aa14.61□□□□□ -0.07
VTI1B-201ENST00000216456 MBD3L1Q8WWY6 194 aa14.61□□□□□ -0.07
VTI1B-201ENST00000216456 TMEM70Q9BUB7 260 aa14.61□□□□□ -0.07
VTI1B-201ENST00000216456 TM2D2Q9BX73 214 aa14.61□□□□□ -0.07
VTI1B-201ENST00000216456 SSTP61278 116 aa14.6□□□□□ -0.07
VTI1B-201ENST00000216456 ZFP82Q8N141 532 aa14.6□□□□□ -0.07
VTI1B-201ENST00000216456 ZNF471Q9BX82 626 aaPredicted RBP14.6□□□□□ -0.07
VTI1B-201ENST00000216456 KLK12Q9UKR0 248 aa14.6□□□□□ -0.07
VTI1B-201ENST00000216456 BOLA1Q9Y3E2 137 aa14.6□□□□□ -0.07
VTI1B-201ENST00000216456 A0A087WWC5 75 aa14.59□□□□□ -0.07
VTI1B-201ENST00000216456 TRAV8-3A0A0A6YYJ7 113 aa14.59□□□□□ -0.07
VTI1B-201ENST00000216456 SEC11BP0C7V7 166 aa14.59□□□□□ -0.07
VTI1B-201ENST00000216456 ZNF345Q14585 488 aa14.59□□□□□ -0.07
VTI1B-201ENST00000216456 UBE2D3P61077 147 aa14.58□□□□□ -0.08
VTI1B-201ENST00000216456 UBE2D2P62837 147 aa14.58□□□□□ -0.08
VTI1B-201ENST00000216456 TCEAL7Q9BRU2 100 aa14.58□□□□□ -0.08
VTI1B-201ENST00000216456 MLST8Q9BVC4 326 aa14.58□□□□□ -0.08
VTI1B-201ENST00000216456 BCL2L11O43521 198 aa14.57□□□□□ -0.08
VTI1B-201ENST00000216456 CCL20P78556 96 aa14.57□□□□□ -0.08
VTI1B-201ENST00000216456 PRR27Q6MZM9 219 aa14.57□□□□□ -0.08
VTI1B-201ENST00000216456 BAGE2Q86Y30 109 aa14.57□□□□□ -0.08
VTI1B-201ENST00000216456 IGKV2D-24A0A075B6R9 120 aa14.56□□□□□ -0.08
VTI1B-201ENST00000216456 UBE2WQ96B02 151 aa14.56□□□□□ -0.08
VTI1B-201ENST00000216456 NEXN-AS1Q8NBZ9 246 aa14.55□□□□□ -0.08
VTI1B-201ENST00000216456 DERL1Q9BUN8 251 aa14.55□□□□□ -0.08
VTI1B-201ENST00000216456 URGCP-MRPS24S4R325 110 aa14.55□□□□□ -0.08
VTI1B-201ENST00000216456 DMBT1Q9UGM3 2413 aaPredicted RBP14.54□□□□□ -0.08
VTI1B-201ENST00000216456 TRBV7-3A0A075B6L6 115 aa14.54□□□□□ -0.08
VTI1B-201ENST00000216456 HMSDA8MTL9 139 aa14.54□□□□□ -0.08
VTI1B-201ENST00000216456 FAM229AH3BQW9 127 aa14.54□□□□□ -0.08
VTI1B-201ENST00000216456 H2AFB1P0C5Y9 115 aa14.54□□□□□ -0.08
VTI1B-201ENST00000216456 RPL36AP83881 106 aaKnown RBP14.54□□□□□ -0.08
VTI1B-201ENST00000216456 ZNF56Q15929 161 aa14.54□□□□□ -0.08
VTI1B-201ENST00000216456 RPL36ALQ969Q0 106 aaKnown RBP14.54□□□□□ -0.08
VTI1B-201ENST00000216456 TRBV10-1A0A0K0K1A3 114 aa14.53□□□□□ -0.08
VTI1B-201ENST00000216456 KANTRA0A1W2PQU2 76 aa14.53□□□□□ -0.08
VTI1B-201ENST00000216456 UMAD1C9J7I0 102 aa14.53□□□□□ -0.08
VTI1B-201ENST00000216456 TOR2AQ5JU69 321 aa14.53□□□□□ -0.08
VTI1B-201ENST00000216456 A0A0D9SG52 128 aa14.52□□□□□ -0.09
VTI1B-201ENST00000216456 PFDN1O60925 122 aa14.52□□□□□ -0.09
VTI1B-201ENST00000216456 Q6ZSA8 131 aa14.52□□□□□ -0.09
VTI1B-201ENST00000216456 TMUB2Q71RG4 321 aa14.52□□□□□ -0.09
VTI1B-201ENST00000216456 A0A087WX48 190 aa14.51□□□□□ -0.09
VTI1B-201ENST00000216456 SNAI2O43623 268 aa14.51□□□□□ -0.09
VTI1B-201ENST00000216456 GZMBP10144 247 aa14.51□□□□□ -0.09
VTI1B-201ENST00000216456 RPL35P42766 123 aaKnown RBP14.51□□□□□ -0.09
VTI1B-201ENST00000216456 OR10G8Q8NGN5 311 aa14.51□□□□□ -0.09
VTI1B-201ENST00000216456 SSBP4Q9BWG4 385 aaPredicted RBP14.51□□□□□ -0.09
VTI1B-201ENST00000216456 RBFOX3A6NFN3 312 aa14.5□□□□□ -0.09
VTI1B-201ENST00000216456 TMEM262E9PQX1 116 aa14.5□□□□□ -0.09
VTI1B-201ENST00000216456 S100A9P06702 114 aaKnown RBP14.5□□□□□ -0.09
VTI1B-201ENST00000216456 RAB4BP61018 213 aa14.5□□□□□ -0.09
VTI1B-201ENST00000216456 GNG13Q9P2W3 67 aa14.5□□□□□ -0.09
VTI1B-201ENST00000216456 TRBV6-8A0A0A6YYG3 113 aa14.49□□□□□ -0.09
VTI1B-201ENST00000216456 MPV17L2Q567V2 206 aa14.49□□□□□ -0.09
VTI1B-201ENST00000216456 SPANXN1Q5VSR9 72 aa14.49□□□□□ -0.09
VTI1B-201ENST00000216456 ENHOQ6UWT2 76 aa14.49□□□□□ -0.09
VTI1B-201ENST00000216456 F5H697 171 aa14.48□□□□□ -0.09
VTI1B-201ENST00000216456 C1QBP02746 253 aa14.48□□□□□ -0.09
VTI1B-201ENST00000216456 CXCL1P09341 107 aa14.48□□□□□ -0.09
VTI1B-201ENST00000216456 NTM-AS1Q6ZSK4 140 aa14.48□□□□□ -0.09
VTI1B-201ENST00000216456 C15orf54Q8N8G6 183 aa14.48□□□□□ -0.09
VTI1B-201ENST00000216456 KIF25-AS1Q9Y6Z4 181 aa14.48□□□□□ -0.09
VTI1B-201ENST00000216456 IGLV2-8P01709 118 aa14.47□□□□□ -0.09
VTI1B-201ENST00000216456 OR5AL1P0C617 328 aa14.47□□□□□ -0.09
VTI1B-201ENST00000216456 Q8N976 141 aa14.47□□□□□ -0.09
VTI1B-201ENST00000216456 RMI2Q96E14 147 aa14.47□□□□□ -0.09
VTI1B-201ENST00000216456 RAB19A4D1S5 217 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms