RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 UBE2E1P51965 193 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 HIST2H2BCQ6DN03 193 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 Q6ZUT4 128 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 SEM1Q6ZVN7 128 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 C11orf52Q96A22 123 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 TIAF1O95411 115 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 CRYGSP22914 178 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 IGKV3D-7A0A0C4DH55 119 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 SP7Q8TDD2 431 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 J3QLI3 93 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 HOXB4P17483 251 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 RSPO4Q2I0M5 234 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-257ENST00000638009 CAMK2N2Q96S95 79 aa15.46■□□□□ 0.07
CACNA1A-257ENST00000638009 LGALS9O00182 355 aa15.46■□□□□ 0.07
CACNA1A-257ENST00000638009 AMTNQ6UX39 209 aa15.46■□□□□ 0.07
CACNA1A-257ENST00000638009 TRAV4A0A0B4J268 109 aa15.46■□□□□ 0.06
CACNA1A-257ENST00000638009 IGKV1-39P01597 117 aa15.46■□□□□ 0.06
CACNA1A-257ENST00000638009 IGKV1D-39P04432 117 aa15.46■□□□□ 0.06
CACNA1A-257ENST00000638009 V9GYV3 84 aa15.45■□□□□ 0.06
CACNA1A-257ENST00000638009 C10orf55Q5SWW7 151 aa15.45■□□□□ 0.06
CACNA1A-257ENST00000638009 TRBV10-2A0A0K0K1G8 114 aa15.45■□□□□ 0.06
CACNA1A-257ENST00000638009 NDUFA4L2Q9NRX3 87 aa15.45■□□□□ 0.06
CACNA1A-257ENST00000638009 UPK3BQ9BT76 320 aa15.44■□□□□ 0.06
CACNA1A-257ENST00000638009 LINC00643Q86TS7 51 aa15.44■□□□□ 0.06
CACNA1A-257ENST00000638009 PRB2P02812 416 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-257ENST00000638009 ATP1A1-AS1Q5TC04 95 aa15.44■□□□□ 0.06
CACNA1A-257ENST00000638009 CCL25O15444 150 aa15.44■□□□□ 0.06
CACNA1A-257ENST00000638009 CCL18P55774 89 aa15.44■□□□□ 0.06
CACNA1A-257ENST00000638009 DKK2Q9UBU2 259 aa15.44■□□□□ 0.06
CACNA1A-257ENST00000638009 KLK9Q9UKQ9 250 aa15.44■□□□□ 0.06
CACNA1A-257ENST00000638009 H3BUA1 57 aa15.43■□□□□ 0.06
CACNA1A-257ENST00000638009 MRPL23Q16540 153 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-257ENST00000638009 C4orf51C9J302 202 aa15.43■□□□□ 0.06
CACNA1A-257ENST00000638009 ZNF837Q96EG3 531 aaPredicted RBP15.43■□□□□ 0.06
CACNA1A-257ENST00000638009 DIRC1Q969H9 104 aa15.43■□□□□ 0.06
CACNA1A-257ENST00000638009 B9D2Q9BPU9 175 aa15.43■□□□□ 0.06
CACNA1A-257ENST00000638009 LINC00473A8K010 186 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 HIGD1BQ9P298 99 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 GATA4P43694 442 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 PRB1P04280 392 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 A6NED7 52 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 FAM236DA0A1B0GTK5 79 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 NDUFA1O15239 70 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 FAM236CP0DP71 79 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 C14orf177Q52M58 125 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 CLPSL2Q6UWE3 100 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 SERP1Q9Y6X1 66 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 C1QCP02747 245 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 SPRR3Q9UBC9 169 aa15.42■□□□□ 0.06
CACNA1A-257ENST00000638009 IGHV1-58A0A0C4DH39 117 aa15.41■□□□□ 0.06
CACNA1A-257ENST00000638009 LINC00479Q96M42 142 aa15.41■□□□□ 0.06
CACNA1A-257ENST00000638009 RNF183Q96D59 192 aa15.41■□□□□ 0.06
CACNA1A-257ENST00000638009 A4D1N5 150 aa15.41■□□□□ 0.06
CACNA1A-257ENST00000638009 EFNA2O43921 213 aa15.41■□□□□ 0.06
CACNA1A-257ENST00000638009 C16orf74Q96GX8 76 aa15.41■□□□□ 0.06
CACNA1A-257ENST00000638009 IGKV1-16P04430 117 aa15.4■□□□□ 0.06
CACNA1A-257ENST00000638009 TRAV26-2A0A0B4J265 109 aa15.4■□□□□ 0.06
CACNA1A-257ENST00000638009 BPY2O14599 106 aa15.4■□□□□ 0.06
CACNA1A-257ENST00000638009 MSMBP08118 114 aa15.4■□□□□ 0.06
CACNA1A-257ENST00000638009 ANKRD39Q53RE8 183 aa15.39■□□□□ 0.05
CACNA1A-257ENST00000638009 FGFBP3Q8TAT2 258 aa15.39■□□□□ 0.05
CACNA1A-257ENST00000638009 GFI1Q99684 422 aa15.39■□□□□ 0.05
CACNA1A-257ENST00000638009 IGKV1OR2-108A0A075B7D4 117 aa15.39■□□□□ 0.05
CACNA1A-257ENST00000638009 IGLV3-19P01714 112 aa15.39■□□□□ 0.05
CACNA1A-257ENST00000638009 H3BRN7 92 aa15.39■□□□□ 0.05
CACNA1A-257ENST00000638009 VOPP1Q96AW1 172 aa15.39■□□□□ 0.05
CACNA1A-257ENST00000638009 Q6P435 159 aa15.39■□□□□ 0.05
CACNA1A-257ENST00000638009 FOXI1Q12951 378 aa15.39■□□□□ 0.05
CACNA1A-257ENST00000638009 GAFA1Q96PS6 74 aa15.38■□□□□ 0.05
CACNA1A-257ENST00000638009 IGKV1D-8A0A087WSZ0 117 aa15.38■□□□□ 0.05
CACNA1A-257ENST00000638009 K7EM74 188 aa15.38■□□□□ 0.05
CACNA1A-257ENST00000638009 NDUFV3P56181 108 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-257ENST00000638009 CD177Q8N6Q3 437 aa15.38■□□□□ 0.05
CACNA1A-257ENST00000638009 FAM110AQ9BQ89 295 aa15.38■□□□□ 0.05
CACNA1A-257ENST00000638009 C10orf91Q5T1B1 145 aa15.38■□□□□ 0.05
CACNA1A-257ENST00000638009 ZC2HC1AQ96GY0 325 aa15.38■□□□□ 0.05
CACNA1A-257ENST00000638009 MPLKIPQ8TAP9 179 aa15.38■□□□□ 0.05
CACNA1A-257ENST00000638009 IGHV4-4A0A075B6R2 117 aa15.37■□□□□ 0.05
CACNA1A-257ENST00000638009 IGHV2-5P01817 119 aa15.37■□□□□ 0.05
CACNA1A-257ENST00000638009 PIEZO1Q92508 2521 aa15.37■□□□□ 0.05
CACNA1A-257ENST00000638009 ZNF833PQ6ZTB9 187 aa15.36■□□□□ 0.05
CACNA1A-257ENST00000638009 IGHV3-38A0A0C4DH36 116 aa15.36■□□□□ 0.05
CACNA1A-257ENST00000638009 BRD3OSQ6XYD6 125 aa15.36■□□□□ 0.05
CACNA1A-257ENST00000638009 ATP6V0E1O15342 81 aa15.36■□□□□ 0.05
CACNA1A-257ENST00000638009 FGF23Q9GZV9 251 aaPredicted RBP15.36■□□□□ 0.05
CACNA1A-257ENST00000638009 TRBV7-3A0A075B6L6 115 aa15.36■□□□□ 0.05
CACNA1A-257ENST00000638009 IGHV7-4-1A0A0J9YVY3 117 aa15.36■□□□□ 0.05
CACNA1A-257ENST00000638009 Q8N1Y9 231 aa15.35■□□□□ 0.05
CACNA1A-257ENST00000638009 NOP10Q9NPE3 64 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-257ENST00000638009 GNLYP22749 145 aa15.35■□□□□ 0.05
CACNA1A-257ENST00000638009 LYNX1G3V0Z9 82 aa15.34■□□□□ 0.05
CACNA1A-257ENST00000638009 K7EQD1 137 aa15.34■□□□□ 0.05
CACNA1A-257ENST00000638009 LYNX1P0DP58 116 aa15.34■□□□□ 0.05
CACNA1A-257ENST00000638009 MST1P26927 711 aa15.34■□□□□ 0.05
CACNA1A-257ENST00000638009 CYYR1Q96J86 154 aa15.34■□□□□ 0.05
CACNA1A-257ENST00000638009 MBD3L4A6NDZ8 208 aaPredicted RBP15.34■□□□□ 0.05
CACNA1A-257ENST00000638009 MBD3L3A6NE82 208 aaPredicted RBP15.34■□□□□ 0.05
CACNA1A-257ENST00000638009 MBD3L5A6NJ08 208 aaPredicted RBP15.34■□□□□ 0.05
CACNA1A-257ENST00000638009 G3V4G9 280 aa15.34■□□□□ 0.05
CACNA1A-257ENST00000638009 MBD3L2Q8NHZ7 208 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms