RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 LTAP01374 205 aa13.93□□□□□ -0.18
CACNA1A-227ENST00000636549 NPSP0C0P6 89 aa13.93□□□□□ -0.18
CACNA1A-227ENST00000636549 LY6G6EA0A0G2JKS1 128 aa13.93□□□□□ -0.18
CACNA1A-227ENST00000636549 A0A1B0GX51 115 aa13.93□□□□□ -0.18
CACNA1A-227ENST00000636549 NREPQ16612 68 aa13.93□□□□□ -0.18
CACNA1A-227ENST00000636549 ZSWIM8A7E2V4 1837 aa13.93□□□□□ -0.18
CACNA1A-227ENST00000636549 OR11H6Q8NGC7 330 aa13.92□□□□□ -0.18
CACNA1A-227ENST00000636549 USF3Q68DE3 2245 aa13.92□□□□□ -0.18
CACNA1A-227ENST00000636549 SPTBN2O15020 2390 aa13.92□□□□□ -0.18
CACNA1A-227ENST00000636549 MLST8Q9BVC4 326 aa13.92□□□□□ -0.18
CACNA1A-227ENST00000636549 NTN5Q8WTR8 489 aaPredicted RBP13.91□□□□□ -0.18
CACNA1A-227ENST00000636549 CTSZQ9UBR2 303 aa13.91□□□□□ -0.18
CACNA1A-227ENST00000636549 PPDPFQ9H3Y8 114 aa13.91□□□□□ -0.18
CACNA1A-227ENST00000636549 SIPA1L1O43166 1804 aa13.91□□□□□ -0.18
CACNA1A-227ENST00000636549 IGKV1D-37A0A075B6S9 117 aa13.91□□□□□ -0.18
CACNA1A-227ENST00000636549 FAM19A5Q7Z5A7 132 aaPredicted RBP13.91□□□□□ -0.18
CACNA1A-227ENST00000636549 UTF1Q5T230 341 aa13.91□□□□□ -0.18
CACNA1A-227ENST00000636549 C18orf32Q8TCD1 76 aa13.91□□□□□ -0.18
CACNA1A-227ENST00000636549 TRAV26-1A0A087WT03 109 aa13.91□□□□□ -0.18
CACNA1A-227ENST00000636549 GFRA4Q9GZZ7 299 aa13.91□□□□□ -0.18
CACNA1A-227ENST00000636549 SND1-IT1Q9HBX3 110 aa13.91□□□□□ -0.18
CACNA1A-227ENST00000636549 C17orf82Q86X59 251 aaPredicted RBP13.9□□□□□ -0.18
CACNA1A-227ENST00000636549 ADAMTS9Q9P2N4 1935 aa13.9□□□□□ -0.18
CACNA1A-227ENST00000636549 RPL39P62891 51 aaKnown RBP13.9□□□□□ -0.18
CACNA1A-227ENST00000636549 ETDBQ3ZM63 59 aa13.9□□□□□ -0.18
CACNA1A-227ENST00000636549 LINC00482Q8N8I6 264 aa13.9□□□□□ -0.18
CACNA1A-227ENST00000636549 ZNF664Q8N3J9 261 aa13.9□□□□□ -0.18
CACNA1A-227ENST00000636549 SPTSSBQ8NFR3 76 aa13.89□□□□□ -0.19
CACNA1A-227ENST00000636549 NDUFA1O15239 70 aa13.89□□□□□ -0.19
CACNA1A-227ENST00000636549 NDUFS6O75380 124 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-227ENST00000636549 POLR3KQ9Y2Y1 108 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-227ENST00000636549 LINC01559Q495D7 138 aa13.89□□□□□ -0.19
CACNA1A-227ENST00000636549 FAM19A1Q7Z5A9 133 aa13.89□□□□□ -0.19
CACNA1A-227ENST00000636549 LHFPL1Q86WI0 220 aa13.89□□□□□ -0.19
CACNA1A-227ENST00000636549 CRIPAKQ8N1N5 446 aa13.89□□□□□ -0.19
CACNA1A-227ENST00000636549 COLCA2A8K830 154 aa13.88□□□□□ -0.19
CACNA1A-227ENST00000636549 IGLC2P0DOY2 106 aa13.88□□□□□ -0.19
CACNA1A-227ENST00000636549 IGLC3P0DOY3 106 aa13.88□□□□□ -0.19
CACNA1A-227ENST00000636549 IGKV2D-26A0A0A0MRZ7 120 aa13.88□□□□□ -0.19
CACNA1A-227ENST00000636549 DNAJC9-AS1A6NH13 148 aa13.88□□□□□ -0.19
CACNA1A-227ENST00000636549 SCXQ7RTU7 201 aa13.88□□□□□ -0.19
CACNA1A-227ENST00000636549 P0DMU3 169 aa13.88□□□□□ -0.19
CACNA1A-227ENST00000636549 FAM231AP0DMU4 169 aa13.88□□□□□ -0.19
CACNA1A-227ENST00000636549 FAM231CP0DMU5 169 aa13.88□□□□□ -0.19
CACNA1A-227ENST00000636549 TMEM61Q8N0U2 210 aa13.88□□□□□ -0.19
CACNA1A-227ENST00000636549 TRBV12-3P01733 135 aa13.88□□□□□ -0.19
CACNA1A-227ENST00000636549 U3KQA8 63 aa13.87□□□□□ -0.19
CACNA1A-227ENST00000636549 UBE2V1Q13404 147 aa13.87□□□□□ -0.19
CACNA1A-227ENST00000636549 WFDC10BQ8IUB3 73 aa13.87□□□□□ -0.19
CACNA1A-227ENST00000636549 PCP2Q8IVA1 136 aa13.87□□□□□ -0.19
CACNA1A-227ENST00000636549 PYGO2Q9BRQ0 406 aa13.87□□□□□ -0.19
CACNA1A-227ENST00000636549 MP68P56378 58 aa13.87□□□□□ -0.19
CACNA1A-227ENST00000636549 RETNLBQ9BQ08 111 aa13.87□□□□□ -0.19
CACNA1A-227ENST00000636549 CRYGDP07320 174 aa13.87□□□□□ -0.19
CACNA1A-227ENST00000636549 CEMP1Q6PRD7 247 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-227ENST00000636549 SS18L2Q9UHA2 77 aa13.86□□□□□ -0.19
CACNA1A-227ENST00000636549 SPAG11BQ08648 103 aa13.86□□□□□ -0.19
CACNA1A-227ENST00000636549 Q8N1Y9 231 aa13.86□□□□□ -0.19
CACNA1A-227ENST00000636549 FXYD5Q96DB9 178 aa13.86□□□□□ -0.19
CACNA1A-227ENST00000636549 Q8TCH9 128 aa13.86□□□□□ -0.19
CACNA1A-227ENST00000636549 AGPAT4-IT1Q9H0P7 198 aa13.86□□□□□ -0.19
CACNA1A-227ENST00000636549 EP300Q09472 2414 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-227ENST00000636549 ADORA2A-AS1P86434 159 aa13.86□□□□□ -0.19
CACNA1A-227ENST00000636549 IGF2-ASQ6U949 168 aa13.85□□□□□ -0.19
CACNA1A-227ENST00000636549 FNDC1Q4ZHG4 1894 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-227ENST00000636549 PROK2Q9HC23 129 aa13.85□□□□□ -0.19
CACNA1A-227ENST00000636549 IGHV2-70P01814 119 aa13.85□□□□□ -0.19
CACNA1A-227ENST00000636549 Q6ZVH6 145 aa13.85□□□□□ -0.19
CACNA1A-227ENST00000636549 PLCE1Q9P212 2302 aa13.85□□□□□ -0.19
CACNA1A-227ENST00000636549 MUSTN1Q8IVN3 82 aa13.84□□□□□ -0.19
CACNA1A-227ENST00000636549 CLEC2BQ92478 149 aa13.84□□□□□ -0.19
CACNA1A-227ENST00000636549 EML6Q6ZMW3 1958 aa13.84□□□□□ -0.19
CACNA1A-227ENST00000636549 BVES-AS1Q5T3Y7 98 aa13.84□□□□□ -0.19
CACNA1A-227ENST00000636549 CCL25O15444 150 aa13.84□□□□□ -0.19
CACNA1A-227ENST00000636549 DLEU1O43261 78 aa13.84□□□□□ -0.19
CACNA1A-227ENST00000636549 QRFPP83859 136 aa13.84□□□□□ -0.19
CACNA1A-227ENST00000636549 C9orf118A6NHY6 69 aa13.84□□□□□ -0.19
CACNA1A-227ENST00000636549 C2orf70A6NJV1 201 aa13.83□□□□□ -0.2
CACNA1A-227ENST00000636549 ZNF491Q8N8L2 437 aa13.83□□□□□ -0.2
CACNA1A-227ENST00000636549 IGLC1P0CG04 106 aa13.83□□□□□ -0.2
CACNA1A-227ENST00000636549 ZNF726P1Q15940 193 aa13.83□□□□□ -0.2
CACNA1A-227ENST00000636549 DCANP1Q8TF63 244 aa13.83□□□□□ -0.2
CACNA1A-227ENST00000636549 TRBV24-1A0A075B6N3 115 aa13.83□□□□□ -0.2
CACNA1A-227ENST00000636549 UBE2D3P61077 147 aa13.83□□□□□ -0.2
CACNA1A-227ENST00000636549 OPRPNQ99935 248 aaPredicted RBP13.82□□□□□ -0.2
CACNA1A-227ENST00000636549 LYPD6Q86Y78 171 aa13.82□□□□□ -0.2
CACNA1A-227ENST00000636549 LINC00269Q8N2A0 174 aa13.82□□□□□ -0.2
CACNA1A-227ENST00000636549 MSRB1Q9NZV6 116 aa13.82□□□□□ -0.2
CACNA1A-227ENST00000636549 PKIGQ9Y2B9 76 aa13.82□□□□□ -0.2
CACNA1A-227ENST00000636549 WNK2Q9Y3S1 2297 aa13.82□□□□□ -0.2
CACNA1A-227ENST00000636549 ZNF492Q9P255 531 aa13.82□□□□□ -0.2
CACNA1A-227ENST00000636549 PPDPFLQ8WWR9 84 aa13.81□□□□□ -0.2
CACNA1A-227ENST00000636549 RLFQ13129 1914 aa13.81□□□□□ -0.2
CACNA1A-227ENST00000636549 Q6ZWC4 215 aa13.81□□□□□ -0.2
CACNA1A-227ENST00000636549 VWA8A3KMH1 1905 aa13.81□□□□□ -0.2
CACNA1A-227ENST00000636549 F8VRH5 84 aa13.81□□□□□ -0.2
CACNA1A-227ENST00000636549 C15orf65H3BRN8 121 aa13.81□□□□□ -0.2
CACNA1A-227ENST00000636549 PLA2G2CQ5R387 149 aa13.8□□□□□ -0.2
CACNA1A-227ENST00000636549 A0A0J9YXV3 536 aa13.8□□□□□ -0.2
CACNA1A-227ENST00000636549 SMIM27A0A1W2PRY6 76 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms