RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CFPP27918 469 aa9.21□□□□□ -0.93
SHPRH-211ENST00000629427 C4orf48Q5BLP8 95 aa9.21□□□□□ -0.93
SHPRH-211ENST00000629427 COX8AP10176 69 aa9.21□□□□□ -0.93
SHPRH-211ENST00000629427 ZNF524Q96C55 264 aa9.21□□□□□ -0.93
SHPRH-211ENST00000629427 BLCAPP62952 87 aa9.21□□□□□ -0.94
SHPRH-211ENST00000629427 IGHV4-28A0A0C4DH34 117 aa9.21□□□□□ -0.94
SHPRH-211ENST00000629427 WIPF2Q8TF74 440 aaPredicted RBP9.21□□□□□ -0.94
SHPRH-211ENST00000629427 RS1O15537 224 aa9.21□□□□□ -0.94
SHPRH-211ENST00000629427 FAM231DQ6ZW35 169 aa9.21□□□□□ -0.94
SHPRH-211ENST00000629427 CREBBPQ92793 2442 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 CLPSL1A2RUU4 121 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 SPRNQ5BIV9 151 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 ATP6V0E2Q8NHE4 81 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 K7ERJ3 54 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 AMTNQ6UX39 209 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 DKK2Q9UBU2 259 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 K7EQD1 137 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 ETV2O00321 342 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-211ENST00000629427 COX7A2LO14548 114 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 PPDPFLQ8WWR9 84 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 SLX1AQ9BQ83 275 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 TRAV4A0A0B4J268 109 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 IGLC7A0M8Q6 106 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 F8W1H4 67 aa9.2□□□□□ -0.94
SHPRH-211ENST00000629427 RSPO1Q2MKA7 263 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-211ENST00000629427 DAZ2Q13117 558 aaKnown RBP9.19□□□□□ -0.94
SHPRH-211ENST00000629427 DAZ4Q86SG3 579 aaKnown RBP9.19□□□□□ -0.94
SHPRH-211ENST00000629427 DAZ3Q9NR90 486 aaKnown RBP9.19□□□□□ -0.94
SHPRH-211ENST00000629427 ORMDL1Q9P0S3 153 aa9.19□□□□□ -0.94
SHPRH-211ENST00000629427 ZNF493Q6ZR52 646 aa9.19□□□□□ -0.94
SHPRH-211ENST00000629427 MRPL52Q86TS9 123 aaKnown RBP9.19□□□□□ -0.94
SHPRH-211ENST00000629427 AJUBAQ96IF1 538 aa9.19□□□□□ -0.94
SHPRH-211ENST00000629427 RBAKDNA6NC62 111 aa9.19□□□□□ -0.94
SHPRH-211ENST00000629427 LTAP01374 205 aa9.19□□□□□ -0.94
SHPRH-211ENST00000629427 WT1P19544 449 aaPredicted RBP9.19□□□□□ -0.94
SHPRH-211ENST00000629427 BVES-AS1Q5T3Y7 98 aa9.19□□□□□ -0.94
SHPRH-211ENST00000629427 HHLA3Q9XRX5 114 aa9.19□□□□□ -0.94
SHPRH-211ENST00000629427 GPR179Q6PRD1 2367 aa9.19□□□□□ -0.94
SHPRH-211ENST00000629427 IFITM1P13164 125 aa9.19□□□□□ -0.94
SHPRH-211ENST00000629427 KLF2Q9Y5W3 355 aaPredicted RBP9.19□□□□□ -0.94
SHPRH-211ENST00000629427 HERV-K104P63124 156 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 RPL39LQ96EH5 51 aaKnown RBP9.18□□□□□ -0.94
SHPRH-211ENST00000629427 AGPAT4-IT1Q9H0P7 198 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 MRPL36Q9P0J6 103 aaKnown RBP9.18□□□□□ -0.94
SHPRH-211ENST00000629427 IGHV4OR15-8A0A075B7B6 117 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 A0A087WW49 117 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 UBE2AP49459 152 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 SH2D6Q7Z4S9 175 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 ANKRD29Q8N6D5 301 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 RITA1Q96K30 269 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 KLK5Q9Y337 293 aaPredicted RBP9.18□□□□□ -0.94
SHPRH-211ENST00000629427 ATP5G1P05496 136 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 SORL1Q92673 2214 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 BAALC-AS2P0C853 105 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 FUSP35637 526 aaKnown RBP eCLIP9.18□□□□□ -0.94
SHPRH-211ENST00000629427 Q6ZWC4 215 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 C15orf53Q8NAA6 179 aa9.18□□□□□ -0.94
SHPRH-211ENST00000629427 IGLC2P0DOY2 106 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 IGLC3P0DOY3 106 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 EML5Q05BV3 1969 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 H3BMG7 143 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 ATRXP46100 2492 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 FAM208BQ5VWN6 2430 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 DEFB4AO15263 64 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 IGLL1P15814 213 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 HIST2H2BCQ6DN03 193 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 RNF152Q8N8N0 203 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 IGHV7-81A0A0B4J1V7 117 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 CHKB-CPT1BH3BT56 60 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 C8orf31Q8N9H6 132 aa9.17□□□□□ -0.94
SHPRH-211ENST00000629427 C1orf147Q96MC9 270 aaPredicted RBP9.17□□□□□ -0.94
SHPRH-211ENST00000629427 SEM1Q6ZVN7 128 aa9.16□□□□□ -0.94
SHPRH-211ENST00000629427 A0A1W2PPM0 123 aa9.16□□□□□ -0.94
SHPRH-211ENST00000629427 COX7B2Q8TF08 81 aa9.16□□□□□ -0.94
SHPRH-211ENST00000629427 CRYBA4P53673 196 aa9.16□□□□□ -0.94
SHPRH-211ENST00000629427 C5orf56Q8N8D9 126 aa9.16□□□□□ -0.94
SHPRH-211ENST00000629427 NPBQ8NG41 125 aa9.16□□□□□ -0.94
SHPRH-211ENST00000629427 K7EN84 100 aa9.16□□□□□ -0.94
SHPRH-211ENST00000629427 SPANXA1Q9NS26 97 aa9.16□□□□□ -0.94
SHPRH-211ENST00000629427 LENEPQ9Y5L5 61 aa9.15□□□□□ -0.94
SHPRH-211ENST00000629427 DEFB135Q30KP9 77 aa9.15□□□□□ -0.94
SHPRH-211ENST00000629427 ETDBQ3ZM63 59 aa9.15□□□□□ -0.94
SHPRH-211ENST00000629427 MUC6Q6W4X9 2439 aa9.15□□□□□ -0.94
SHPRH-211ENST00000629427 NUP210LQ5VU65 1888 aa9.15□□□□□ -0.94
SHPRH-211ENST00000629427 C9orf47Q6ZRZ4 202 aa9.15□□□□□ -0.94
SHPRH-211ENST00000629427 TET2Q6N021 2002 aaPredicted RBP9.15□□□□□ -0.94
SHPRH-211ENST00000629427 K7EMI3 77 aa9.15□□□□□ -0.94
SHPRH-211ENST00000629427 OTOGLQ3ZCN5 2332 aa9.15□□□□□ -0.95
SHPRH-211ENST00000629427 ARHGAP32A7KAX9 2087 aa9.15□□□□□ -0.95
SHPRH-211ENST00000629427 GATA1P15976 413 aaPredicted RBP9.15□□□□□ -0.95
SHPRH-211ENST00000629427 C11orf53Q8IXP5 236 aa9.15□□□□□ -0.95
SHPRH-211ENST00000629427 IGLL5B9A064 214 aa9.14□□□□□ -0.95
SHPRH-211ENST00000629427 ADORA2A-AS1P86434 159 aa9.14□□□□□ -0.95
SHPRH-211ENST00000629427 C2orf70A6NJV1 201 aa9.14□□□□□ -0.95
SHPRH-211ENST00000629427 C20orf144Q9BQM9 153 aa9.14□□□□□ -0.95
SHPRH-211ENST00000629427 POU2AF1Q16633 256 aa9.14□□□□□ -0.95
SHPRH-211ENST00000629427 C12orf74Q32Q52 190 aa9.14□□□□□ -0.95
SHPRH-211ENST00000629427 FANCD2OSQ96PS1 177 aa9.14□□□□□ -0.95
SHPRH-211ENST00000629427 TM2D2Q9BX73 214 aa9.14□□□□□ -0.95
SHPRH-211ENST00000629427 C10orf105Q8TEF2 133 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms