RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 Q6ZTI0 123 aa11.85□□□□□ -0.51
CCNA1-203ENST00000625767 FER1L6-AS1Q8NA97 138 aa11.85□□□□□ -0.51
CCNA1-203ENST00000625767 TSKUQ8WUA8 353 aa11.85□□□□□ -0.51
CCNA1-203ENST00000625767 PGLYRP4Q96LB8 373 aa11.85□□□□□ -0.51
CCNA1-203ENST00000625767 SCRT2Q9NQ03 307 aa11.85□□□□□ -0.51
CCNA1-203ENST00000625767 CSMD3Q7Z407 3707 aa11.85□□□□□ -0.51
CCNA1-203ENST00000625767 HIGD1CA8MV81 97 aa11.84□□□□□ -0.51
CCNA1-203ENST00000625767 SNAPINO95295 136 aa11.84□□□□□ -0.51
CCNA1-203ENST00000625767 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
CCNA1-203ENST00000625767 DMRTA1Q5VZB9 504 aa11.84□□□□□ -0.51
CCNA1-203ENST00000625767 ANAPC16Q96DE5 110 aa11.84□□□□□ -0.51
CCNA1-203ENST00000625767 SSBP4Q9BWG4 385 aaPredicted RBP11.84□□□□□ -0.51
CCNA1-203ENST00000625767 TRGV1A0A0A0MS02 117 aa11.84□□□□□ -0.51
CCNA1-203ENST00000625767 XKRY2A2RUG3 117 aa11.84□□□□□ -0.51
CCNA1-203ENST00000625767 SNAI2O43623 268 aa11.84□□□□□ -0.51
CCNA1-203ENST00000625767 FAM3BP58499 235 aaPredicted RBP11.84□□□□□ -0.51
CCNA1-203ENST00000625767 RHEBQ15382 184 aa11.84□□□□□ -0.51
CCNA1-203ENST00000625767 C11orf68Q9H3H3 251 aaKnown RBP11.84□□□□□ -0.51
CCNA1-203ENST00000625767 DKK2Q9UBU2 259 aa11.84□□□□□ -0.51
CCNA1-203ENST00000625767 SMIM27A0A1W2PRY6 76 aa11.83□□□□□ -0.52
CCNA1-203ENST00000625767 M0R381 172 aa11.83□□□□□ -0.52
CCNA1-203ENST00000625767 PPP1R2P9O14990 202 aa11.83□□□□□ -0.52
CCNA1-203ENST00000625767 SPINK4O60575 86 aa11.83□□□□□ -0.52
CCNA1-203ENST00000625767 DAZ2Q13117 558 aaKnown RBP11.83□□□□□ -0.52
CCNA1-203ENST00000625767 NUP35Q8NFH5 326 aa11.83□□□□□ -0.52
CCNA1-203ENST00000625767 JPT2Q9H910 190 aa11.83□□□□□ -0.52
CCNA1-203ENST00000625767 MSRB1Q9NZV6 116 aa11.83□□□□□ -0.52
CCNA1-203ENST00000625767 PHLDA3Q9Y5J5 127 aa11.83□□□□□ -0.52
CCNA1-203ENST00000625767 GAGE12BA1L429 117 aa11.82□□□□□ -0.52
CCNA1-203ENST00000625767 GAGE7O76087 117 aa11.82□□□□□ -0.52
CCNA1-203ENST00000625767 GAGE12FP0CL80 117 aa11.82□□□□□ -0.52
CCNA1-203ENST00000625767 GAGE12GP0CL81 117 aa11.82□□□□□ -0.52
CCNA1-203ENST00000625767 GAGE12IP0CL82 117 aa11.82□□□□□ -0.52
CCNA1-203ENST00000625767 CTRLP40313 264 aa11.82□□□□□ -0.52
CCNA1-203ENST00000625767 ZNF876PQ49A33 203 aa11.82□□□□□ -0.52
CCNA1-203ENST00000625767 OR5AL1P0C617 328 aa11.81□□□□□ -0.52
CCNA1-203ENST00000625767 DEFB130BP0DP73 79 aa11.81□□□□□ -0.52
CCNA1-203ENST00000625767 DEFB130AP0DP74 79 aa11.81□□□□□ -0.52
CCNA1-203ENST00000625767 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
CCNA1-203ENST00000625767 U3KQK5 164 aa11.81□□□□□ -0.52
CCNA1-203ENST00000625767 A0A087WWC5 75 aa11.81□□□□□ -0.52
CCNA1-203ENST00000625767 M0R2P5 195 aa11.81□□□□□ -0.52
CCNA1-203ENST00000625767 FOXA3P55318 350 aaPredicted RBP11.81□□□□□ -0.52
CCNA1-203ENST00000625767 SPXQ9BT56 116 aa11.81□□□□□ -0.52
CCNA1-203ENST00000625767 GFRA4Q9GZZ7 299 aa11.81□□□□□ -0.52
CCNA1-203ENST00000625767 URGCP-MRPS24S4R325 110 aa11.81□□□□□ -0.52
CCNA1-203ENST00000625767 A0A1W2PPQ1 181 aa11.8□□□□□ -0.52
CCNA1-203ENST00000625767 SCO1O75880 301 aa11.8□□□□□ -0.52
CCNA1-203ENST00000625767 CTDSP1Q9GZU7 261 aa11.8□□□□□ -0.52
CCNA1-203ENST00000625767 NAT8BQ9UHF3 227 aa11.8□□□□□ -0.52
CCNA1-203ENST00000625767 NTF3P20783 257 aa11.79□□□□□ -0.52
CCNA1-203ENST00000625767 NANOS2P60321 138 aaKnown RBP11.79□□□□□ -0.52
CCNA1-203ENST00000625767 SPANXN1Q5VSR9 72 aa11.79□□□□□ -0.52
CCNA1-203ENST00000625767 POM121L12Q8N7R1 296 aa11.79□□□□□ -0.52
CCNA1-203ENST00000625767 EDA2RQ9HAV5 297 aa11.79□□□□□ -0.52
CCNA1-203ENST00000625767 FAM231BA6NCW3 169 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 LYRM9A8MSI8 78 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 SPART-AS1P0CW21 52 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 C12orf74Q32Q52 190 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 TMEM88Q6PEY1 159 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 CBLN2Q8IUK8 224 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 LINC00612Q8N6U2 182 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 RASL10AQ92737 203 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 SAMD10Q9BYL1 202 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 F2Z2F3 143 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 NXPH4O95158 308 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 IGHV3-53P01767 116 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 MRPL54Q6P161 138 aaKnown RBP11.78□□□□□ -0.52
CCNA1-203ENST00000625767 CNFNQ9BYD5 112 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 TMEM242Q9NWH2 141 aa11.78□□□□□ -0.52
CCNA1-203ENST00000625767 CXorf65A6NEN9 183 aa11.77□□□□□ -0.53
CCNA1-203ENST00000625767 LGALS9BQ3B8N2 356 aa11.77□□□□□ -0.53
CCNA1-203ENST00000625767 ZFP82Q8N141 532 aa11.77□□□□□ -0.53
CCNA1-203ENST00000625767 IGHV3-73A0A0B4J1V6 119 aa11.76□□□□□ -0.53
CCNA1-203ENST00000625767 DAD1P61803 113 aa11.76□□□□□ -0.53
CCNA1-203ENST00000625767 TWIST1Q15672 202 aa11.76□□□□□ -0.53
CCNA1-203ENST00000625767 Q6ZTC4 211 aa11.76□□□□□ -0.53
CCNA1-203ENST00000625767 C11orf45Q8TAV5 145 aa11.76□□□□□ -0.53
CCNA1-203ENST00000625767 ZNF479Q96JC4 524 aa11.76□□□□□ -0.53
CCNA1-203ENST00000625767 STARD9Q9P2P6 4700 aa11.76□□□□□ -0.53
CCNA1-203ENST00000625767 TRGV2A0A075B6R0 118 aa11.75□□□□□ -0.53
CCNA1-203ENST00000625767 A0A087WWL8 130 aa11.75□□□□□ -0.53
CCNA1-203ENST00000625767 A0A1B0GUT8 65 aa11.75□□□□□ -0.53
CCNA1-203ENST00000625767 CFAP126Q5VTH2 177 aa11.75□□□□□ -0.53
CCNA1-203ENST00000625767 DYNC2H1Q8NCM8 4307 aaKnown RBP11.75□□□□□ -0.53
CCNA1-203ENST00000625767 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
CCNA1-203ENST00000625767 EVI2AP22794 236 aa11.75□□□□□ -0.53
CCNA1-203ENST00000625767 SYT8Q8NBV8 401 aa11.75□□□□□ -0.53
CCNA1-203ENST00000625767 PTH2Q96A98 100 aa11.75□□□□□ -0.53
CCNA1-203ENST00000625767 S100A1P23297 94 aa11.74□□□□□ -0.53
CCNA1-203ENST00000625767 CACNG7P62955 275 aa11.74□□□□□ -0.53
CCNA1-203ENST00000625767 FAM74A4Q5TZK3 123 aa11.74□□□□□ -0.53
CCNA1-203ENST00000625767 C14orf178Q8N769 122 aaPredicted RBP11.74□□□□□ -0.53
CCNA1-203ENST00000625767 IMMP2LQ96T52 175 aa11.74□□□□□ -0.53
CCNA1-203ENST00000625767 RS1O15537 224 aa11.73□□□□□ -0.53
CCNA1-203ENST00000625767 CRYGDP07320 174 aa11.73□□□□□ -0.53
CCNA1-203ENST00000625767 CAMPP49913 170 aa11.73□□□□□ -0.53
CCNA1-203ENST00000625767 LYSTQ99698 3801 aa11.72□□□□□ -0.53
CCNA1-203ENST00000625767 TGIF2-C20orf24A0A0A6YYL0 155 aa11.72□□□□□ -0.53
CCNA1-203ENST00000625767 A0A1B0GXF2 115 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms