RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 RPS28P62857 69 aaKnown RBP8.77□□□□□ -1.01
TP53-226ENST00000620739 FAM110DQ8TAY7 271 aaPredicted RBP8.77□□□□□ -1.01
TP53-226ENST00000620739 MTORP42345 2549 aa8.77□□□□□ -1.01
TP53-226ENST00000620739 C2orf70A6NJV1 201 aa8.76□□□□□ -1.01
TP53-226ENST00000620739 CLEC19AQ6UXS0 136 aa8.76□□□□□ -1.01
TP53-226ENST00000620739 C18orf15Q96N68 181 aa8.76□□□□□ -1.01
TP53-226ENST00000620739 KLK15Q9H2R5 256 aa8.76□□□□□ -1.01
TP53-226ENST00000620739 TRAV41A0A0B4J266 112 aa8.76□□□□□ -1.01
TP53-226ENST00000620739 A0A1B0GWB2 263 aa8.76□□□□□ -1.01
TP53-226ENST00000620739 GAGE13Q4V321 117 aa8.76□□□□□ -1.01
TP53-226ENST00000620739 ZNF329Q86UD4 541 aa8.76□□□□□ -1.01
TP53-226ENST00000620739 ZNF414Q96IQ9 312 aa8.76□□□□□ -1.01
TP53-226ENST00000620739 PMCHL2Q9BQD1 86 aa8.76□□□□□ -1.01
TP53-226ENST00000620739 RNASE7Q9H1E1 156 aaKnown RBP8.76□□□□□ -1.01
TP53-226ENST00000620739 TRBV9A0A0B4J1U6 114 aa8.75□□□□□ -1.01
TP53-226ENST00000620739 H3BMG7 143 aa8.75□□□□□ -1.01
TP53-226ENST00000620739 GP9P14770 177 aa8.75□□□□□ -1.01
TP53-226ENST00000620739 IBA57Q5T440 356 aaKnown RBP8.75□□□□□ -1.01
TP53-226ENST00000620739 C10orf99Q6UWK7 81 aa8.75□□□□□ -1.01
TP53-226ENST00000620739 IGHV3OR16-13A0A075B7E8 117 aa8.75□□□□□ -1.01
TP53-226ENST00000620739 IGHV3-74A0A0B4J1X5 117 aa8.75□□□□□ -1.01
TP53-226ENST00000620739 PRO0461Q9UI25 63 aa8.75□□□□□ -1.01
TP53-226ENST00000620739 A8MZ25 164 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 SNURFLB1AK76 121 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 COX8AP10176 69 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 ATP6V0E2Q8NHE4 81 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 GTSF1Q8WW33 167 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 IGHV3-66A0A0C4DH42 116 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 PGPA6NDG6 321 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 TRBV12-3P01733 135 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 IGHV3-11P01762 117 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 C19orf54Q5BKX5 351 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 EXOC3-AS1Q8N2X6 119 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 TMEM70Q9BUB7 260 aa8.74□□□□□ -1.01
TP53-226ENST00000620739 IGHV3-49A0A0A0MS15 119 aa8.73□□□□□ -1.01
TP53-226ENST00000620739 WI2-2373I1.2A0A1W2PRP0 233 aa8.73□□□□□ -1.01
TP53-226ENST00000620739 IGHG2P01859 326 aa8.73□□□□□ -1.01
TP53-226ENST00000620739 C6orf226Q5I0X4 101 aa8.73□□□□□ -1.01
TP53-226ENST00000620739 SETD2Q9BYW2 2564 aaPredicted RBP8.73□□□□□ -1.01
TP53-226ENST00000620739 TRGV3P03979 118 aa8.73□□□□□ -1.01
TP53-226ENST00000620739 SMIM13P0DJ93 91 aa8.73□□□□□ -1.01
TP53-226ENST00000620739 Q71RC1 249 aaPredicted RBP8.73□□□□□ -1.01
TP53-226ENST00000620739 NFE4Q86UQ8 179 aa8.73□□□□□ -1.01
TP53-226ENST00000620739 SHANK2-AS3Q9BTD1 123 aa8.73□□□□□ -1.01
TP53-226ENST00000620739 TMEM89A2RUT3 159 aa8.72□□□□□ -1.01
TP53-226ENST00000620739 HOXA3O43365 443 aaPredicted RBP8.72□□□□□ -1.01
TP53-226ENST00000620739 IGF1P05019 195 aa8.72□□□□□ -1.01
TP53-226ENST00000620739 TMEM86BQ8N661 226 aa8.72□□□□□ -1.01
TP53-226ENST00000620739 C11orf52Q96A22 123 aa8.72□□□□□ -1.01
TP53-226ENST00000620739 TXNDC17Q9BRA2 123 aa8.72□□□□□ -1.01
TP53-226ENST00000620739 RABAC1Q9UI14 185 aa8.72□□□□□ -1.01
TP53-226ENST00000620739 H3BRN7 92 aa8.72□□□□□ -1.01
TP53-226ENST00000620739 ATP5LO75964 103 aa8.72□□□□□ -1.01
TP53-226ENST00000620739 FSHBP01225 129 aa8.72□□□□□ -1.01
TP53-226ENST00000620739 CENPWQ5EE01 88 aa8.72□□□□□ -1.01
TP53-226ENST00000620739 IGFL4Q6B9Z1 124 aa8.72□□□□□ -1.01
TP53-226ENST00000620739 APOHP02749 345 aaPredicted RBP8.71□□□□□ -1.01
TP53-226ENST00000620739 FRMD6-AS1P0C7T7 363 aa8.71□□□□□ -1.01
TP53-226ENST00000620739 MYCNOSP40205 109 aa8.71□□□□□ -1.01
TP53-226ENST00000620739 HERVK_113P63121 156 aa8.71□□□□□ -1.01
TP53-226ENST00000620739 Q6Q795 121 aa8.71□□□□□ -1.01
TP53-226ENST00000620739 TMEM136Q6ZRR5 245 aa8.71□□□□□ -1.01
TP53-226ENST00000620739 Q9H3A6 140 aa8.71□□□□□ -1.01
TP53-226ENST00000620739 OTOGQ6ZRI0 2925 aa8.71□□□□□ -1.01
TP53-226ENST00000620739 TRAV8-1A0A0A6YYK1 113 aa8.71□□□□□ -1.02
TP53-226ENST00000620739 TRAV4A0A0B4J268 109 aa8.71□□□□□ -1.02
TP53-226ENST00000620739 CRXO43186 299 aaPredicted RBP8.71□□□□□ -1.02
TP53-226ENST00000620739 HSBP1O75506 76 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 SNCGO76070 127 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 NDUFA7O95182 113 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 HIST2H2BDQ6DRA6 164 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 IL17DQ8TAD2 202 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 TRAV9-1A0A075B6T8 112 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 M0R3E3 92 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 IGLV2-8P01709 118 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 CAMPP49913 170 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 GNB1LQ9BYB4 327 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 TMEM191AQ9H0A3 160 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 EPDR1Q9UM22 224 aa8.7□□□□□ -1.02
TP53-226ENST00000620739 PEX7O00628 323 aa8.69□□□□□ -1.02
TP53-226ENST00000620739 MRPS12O15235 138 aaKnown RBP8.69□□□□□ -1.02
TP53-226ENST00000620739 MT-ND6P03923 174 aa8.69□□□□□ -1.02
TP53-226ENST00000620739 Q6YL49 198 aa8.69□□□□□ -1.02
TP53-226ENST00000620739 TRPT1Q86TN4 253 aaKnown RBP8.69□□□□□ -1.02
TP53-226ENST00000620739 EEF1AKMT3Q96AZ1 226 aa8.69□□□□□ -1.02
TP53-226ENST00000620739 TRBV19A0A075B6N1 114 aa8.69□□□□□ -1.02
TP53-226ENST00000620739 CLPSL1A2RUU4 121 aa8.69□□□□□ -1.02
TP53-226ENST00000620739 CRLF1O75462 422 aa8.69□□□□□ -1.02
TP53-226ENST00000620739 MGST1P10620 155 aaKnown RBP8.69□□□□□ -1.02
TP53-226ENST00000620739 NMUP48645 174 aa8.69□□□□□ -1.02
TP53-226ENST00000620739 Q5XG85 94 aa8.69□□□□□ -1.02
TP53-226ENST00000620739 UNQ9165/PRO28630Q6UXU0 137 aa8.69□□□□□ -1.02
TP53-226ENST00000620739 SMAD5-AS1Q9Y6J3 95 aa8.69□□□□□ -1.02
TP53-226ENST00000620739 FAM236AA0A1B0GUQ0 79 aa8.68□□□□□ -1.02
TP53-226ENST00000620739 FAM236BA0A1B0GV22 79 aa8.68□□□□□ -1.02
TP53-226ENST00000620739 TMEM262E9PQX1 116 aa8.68□□□□□ -1.02
TP53-226ENST00000620739 CSN1S1P47710 185 aa8.68□□□□□ -1.02
TP53-226ENST00000620739 CRIP2P52943 208 aaPredicted RBP8.68□□□□□ -1.02
TP53-226ENST00000620739 KLK9Q2XQG4 91 aa8.68□□□□□ -1.02
TP53-226ENST00000620739 AMTNQ6UX39 209 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms