RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 IL4P05112 153 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 CD7P09564 240 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 FRMD6-AS1P0C7T7 363 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 PYYP10082 97 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 ZNF25P17030 456 aaPredicted RBP3.9□□□□□ -1.79
SHMT1-211ENST00000618902 APOC4P55056 127 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 TNP2Q05952 138 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 SLAQ13239 276 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 PSG3Q16557 428 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 LINC00322Q6ZN03 302 aaPredicted RBP3.9□□□□□ -1.79
SHMT1-211ENST00000618902 Q6ZN92 141 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 GLMPQ8WWB7 406 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 RNF125Q96EQ8 232 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 METTL26Q96S19 204 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 TMEM208Q9BTX3 173 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 PAM16Q9Y3D7 125 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 LINC01549A6NIU2 74 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 OR11H12B2RN74 326 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 H3BRN7 92 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 SYS1-DBNDD2H3BUS1 97 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 BUB3O43684 328 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 TSPOP30536 169 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 LYZP61626 148 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 ODF3L2Q3SX64 289 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 KIAA1644Q3SXP7 199 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 MORN5Q5VZ52 161 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 LEMD1Q68G75 181 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 TCF24Q7RTU0 167 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 WFDC3Q8IUB2 231 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 Q8N976 141 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 BLNKQ8WV28 456 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 MRPL53Q96EL3 112 aaKnown RBP3.89□□□□□ -1.79
SHMT1-211ENST00000618902 LINC00479Q96M42 142 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 AP5S1Q9NUS5 200 aa3.89□□□□□ -1.79
SHMT1-211ENST00000618902 RYR3Q15413 4870 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 IGKV3-7A0A075B6H7 116 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 TRAV34A0A0B4J273 112 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 RBMY1BA6NDE4 496 aaKnown RBP3.88□□□□□ -1.79
SHMT1-211ENST00000618902 RBMY1EA6NEQ0 496 aaKnown RBP3.88□□□□□ -1.79
SHMT1-211ENST00000618902 MRPS12O15235 138 aaKnown RBP3.88□□□□□ -1.79
SHMT1-211ENST00000618902 SPINK4O60575 86 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 IGLV2-11P01706 119 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 SNRPCP09234 159 aaKnown RBP3.88□□□□□ -1.79
SHMT1-211ENST00000618902 RBMY1DP0C7P1 496 aaKnown RBP3.88□□□□□ -1.79
SHMT1-211ENST00000618902 NTF3P20783 257 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 G0S2P27469 103 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 TFPI2P48307 235 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 CAMPP49913 170 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 TCL1AP56279 114 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 DEFB1P60022 68 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 RNASEKQ6P5S7 137 aaKnown RBP3.88□□□□□ -1.79
SHMT1-211ENST00000618902 SLC25A34Q6PIV7 304 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 Q86TA4 180 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 SBSPONQ8IVN8 264 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 DEFB125Q8N687 156 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 PRSS3P2Q8NHM4 247 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 RCHY1Q96PM5 261 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 ASCL2Q99929 193 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 RABAC1Q9UI14 185 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 PSG8Q9UQ74 426 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 VPS13DQ5THJ4 4388 aa3.88□□□□□ -1.79
SHMT1-211ENST00000618902 TMEM189A5PLL7 270 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 LINC01546A6NGU7 62 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 PRSS47A8MTI9 375 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 FABP5P3A8MUU1 101 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 K7EMI3 77 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 K7EQG2 157 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 SOCS3O14543 225 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 SNRPD3P62318 126 aaKnown RBP3.87□□□□□ -1.79
SHMT1-211ENST00000618902 SEC11AP67812 179 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 UBE2V1Q13404 147 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 LGALS9BQ3B8N2 356 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 TDRG1Q3Y452 100 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 ANKRD39Q53RE8 183 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 LINC01545Q5VT33 79 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 FAM104BQ5XKR9 115 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 LGALS9CQ6DKI2 356 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 PRR27Q6MZM9 219 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 EBLN2Q6P2I7 272 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 MORN3Q6PF18 240 aaPredicted RBP3.87□□□□□ -1.79
SHMT1-211ENST00000618902 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 SIGLEC15Q6ZMC9 328 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 FA2HQ7L5A8 372 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 PRNTQ86SH4 94 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 BOD1L2Q8IYS8 172 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 ORMDL3Q8N138 153 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 FAM19A2Q8N3H0 131 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 MUC7Q8TAX7 377 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 DCANP1Q8TF63 244 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 GTSF1Q8WW33 167 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 PGLYRP4Q96LB8 373 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 CLUHP3Q96NS8 147 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 SLC50A1Q9BRV3 221 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 CNFNQ9BYD5 112 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 NXT2Q9NPJ8 142 aaKnown RBP3.87□□□□□ -1.79
SHMT1-211ENST00000618902 LENEPQ9Y5L5 61 aa3.87□□□□□ -1.79
SHMT1-211ENST00000618902 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
SHMT1-211ENST00000618902 A0A087X0K7 114 aa3.86□□□□□ -1.79
SHMT1-211ENST00000618902 TRAV8-2A0A0B4J237 113 aa3.86□□□□□ -1.79
SHMT1-211ENST00000618902 TRBV7-9A0A0J9YWB2 115 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms