RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130		A0A087WW49	117 aa		10.39	□□□□□ -0.75
UBE2F-223	ENST00000612130	TRBV7-9	A0A0J9YWB2	115 aa		10.39	□□□□□ -0.75
UBE2F-223	ENST00000612130		A8MWV9	139 aa		10.39	□□□□□ -0.75
UBE2F-223	ENST00000612130	MT-ATP8	P03928	68 aa		10.39	□□□□□ -0.75
UBE2F-223	ENST00000612130	GRN	P28799	593 aa	Known RBP	10.39	□□□□□ -0.75
UBE2F-223	ENST00000612130	XG	P55808	180 aa		10.39	□□□□□ -0.75
UBE2F-223	ENST00000612130	KLHL30-AS1	Q8NEE0	82 aa		10.39	□□□□□ -0.75
UBE2F-223	ENST00000612130	AJUBA	Q96IF1	538 aa		10.39	□□□□□ -0.75
UBE2F-223	ENST00000612130	CARD19	Q96LW7	228 aa		10.39	□□□□□ -0.75
UBE2F-223	ENST00000612130	APC2	O95996	2303 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	PCNX1	Q96RV3	2341 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	IGIP	A6NJ69	53 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	FAM223B	A6NKX1	122 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130		J3KRW8	73 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	SOCS3	O14543	225 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	TCL1B	O95988	128 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	TSHB	P01222	138 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	IGHV3-30	P01768	117 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	IGHV3-30-5	P0DP03	117 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	ZFP36	P26651	326 aa	Known RBP	10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	FAM223A	Q8IWN6	122 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	C10orf126	Q8N4M7	172 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	TIMM17A	Q99595	171 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	TP53TG1	Q9Y2A0	90 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	ARHGAP32	A7KAX9	2087 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130	ADGRG4	Q8IZF6	3080 aa		10.38	□□□□□ -0.75
UBE2F-223	ENST00000612130		M0QXV9	152 aa		10.37	□□□□□ -0.75
UBE2F-223	ENST00000612130	SLC25A29	Q8N8R3	303 aa		10.37	□□□□□ -0.75
UBE2F-223	ENST00000612130	TPR	P12270	2363 aa	Known RBP	10.37	□□□□□ -0.75
UBE2F-223	ENST00000612130	CFC1B	P0CG36	223 aa		10.37	□□□□□ -0.75
UBE2F-223	ENST00000612130	CFC1	P0CG37	223 aa		10.37	□□□□□ -0.75
UBE2F-223	ENST00000612130	RNASE3	P12724	160 aa	Known RBP	10.37	□□□□□ -0.75
UBE2F-223	ENST00000612130	SFTA2	Q6UW10	78 aa		10.37	□□□□□ -0.75
UBE2F-223	ENST00000612130	PTH2	Q96A98	100 aa		10.37	□□□□□ -0.75
UBE2F-223	ENST00000612130	KIF25-AS1	Q9Y6Z4	181 aa		10.37	□□□□□ -0.75
UBE2F-223	ENST00000612130	POLE	Q07864	2286 aa		10.36	□□□□□ -0.75
UBE2F-223	ENST00000612130	SPRY2	O43597	315 aa		10.36	□□□□□ -0.75
UBE2F-223	ENST00000612130	ZNF688	P0C7X2	276 aa		10.36	□□□□□ -0.75
UBE2F-223	ENST00000612130	DCHS1	Q96JQ0	3298 aa		10.36	□□□□□ -0.75
UBE2F-223	ENST00000612130	LINC01548	A6NM66	108 aa		10.36	□□□□□ -0.75
UBE2F-223	ENST00000612130	SAA4	P35542	130 aa		10.36	□□□□□ -0.75
UBE2F-223	ENST00000612130	POLR2K	P53803	58 aa	Known RBP	10.36	□□□□□ -0.75
UBE2F-223	ENST00000612130	C5orf56	Q8N8D9	126 aa		10.36	□□□□□ -0.75
UBE2F-223	ENST00000612130	PRO1854	Q9UHT4	67 aa		10.36	□□□□□ -0.75
UBE2F-223	ENST00000612130	CACNA1H	O95180	2353 aa		10.36	□□□□□ -0.75
UBE2F-223	ENST00000612130	TMEM262	E9PQX1	116 aa		10.35	□□□□□ -0.75
UBE2F-223	ENST00000612130	ARL3	P36405	182 aa		10.35	□□□□□ -0.75
UBE2F-223	ENST00000612130	LINC00315	P59091	139 aa		10.35	□□□□□ -0.75
UBE2F-223	ENST00000612130	C19orf54	Q5BKX5	351 aa		10.35	□□□□□ -0.75
UBE2F-223	ENST00000612130	NDUFA4	O00483	81 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	VCY	O14598	125 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	RNASE4	P34096	147 aa	Known RBP	10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	CRIP2	P52943	208 aa	Predicted RBP	10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	TSPEAR-AS2	P59090	65 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130		Q6ZS46	218 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	ANKRD29	Q8N6D5	301 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	KIR2DL4	Q99706	377 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	MAP1B	P46821	2468 aa	Known RBP	10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	MGA	Q8IWI9	3026 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	TRAV41	A0A0B4J266	112 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	ZNF876P	Q49A33	203 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130		Q5PR19	223 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	AMELX	Q99217	191 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	ERG28	Q9UKR5	140 aa		10.34	□□□□□ -0.75
UBE2F-223	ENST00000612130	GNRH2	O43555	120 aa		10.33	□□□□□ -0.76
UBE2F-223	ENST00000612130	CNOT1	A5YKK6	2376 aa	Known RBP	10.33	□□□□□ -0.76
UBE2F-223	ENST00000612130	PIEZO2	Q9H5I5	2752 aa		10.33	□□□□□ -0.76
UBE2F-223	ENST00000612130		J3QQQ9	107 aa		10.33	□□□□□ -0.76
UBE2F-223	ENST00000612130	EMP1	P54849	157 aa		10.33	□□□□□ -0.76
UBE2F-223	ENST00000612130	TMEM170B	Q5T4T1	132 aa		10.33	□□□□□ -0.76
UBE2F-223	ENST00000612130	EP300	Q09472	2414 aa	Predicted RBP	10.32	□□□□□ -0.76
UBE2F-223	ENST00000612130	SCGB1C2	P0DMR2	95 aa		10.32	□□□□□ -0.76
UBE2F-223	ENST00000612130	LGALS3	P17931	250 aa	Known RBP	10.32	□□□□□ -0.76
UBE2F-223	ENST00000612130	SUMO4	Q6EEV6	95 aa		10.32	□□□□□ -0.76
UBE2F-223	ENST00000612130	WFDC12	Q8WWY7	111 aa		10.32	□□□□□ -0.76
UBE2F-223	ENST00000612130	TRBV6-5	A0A0K0K1A5	114 aa		10.31	□□□□□ -0.76
UBE2F-223	ENST00000612130	TRBV27	A0A0K0K1C4	114 aa		10.31	□□□□□ -0.76
UBE2F-223	ENST00000612130	UNQ9165/PRO28630	Q6UXU0	137 aa		10.31	□□□□□ -0.76
UBE2F-223	ENST00000612130	ZNRF2	Q8NHG8	242 aa		10.31	□□□□□ -0.76
UBE2F-223	ENST00000612130	MOB4	Q9Y3A3	225 aa		10.31	□□□□□ -0.76
UBE2F-223	ENST00000612130	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.31	□□□□□ -0.76
UBE2F-223	ENST00000612130	ANKRD11	Q6UB99	2663 aa	Predicted RBP	10.31	□□□□□ -0.76
UBE2F-223	ENST00000612130		A0A0B4J2C4	111 aa		10.31	□□□□□ -0.76
UBE2F-223	ENST00000612130	NPFF	O15130	113 aa		10.31	□□□□□ -0.76
UBE2F-223	ENST00000612130	SLC25A20	O43772	301 aa		10.31	□□□□□ -0.76
UBE2F-223	ENST00000612130	RPL39	P62891	51 aa	Known RBP	10.31	□□□□□ -0.76
UBE2F-223	ENST00000612130	BSN	Q9UPA5	3926 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	KLLN	B2CW77	178 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	LGALS9	O00182	355 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	TACC2	O95359	2948 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	IGHV1-69	P01742	117 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130		P0DMU3	169 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	FAM231A	P0DMU4	169 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	FAM231C	P0DMU5	169 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	WNK2	Q9Y3S1	2297 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	SDHAF1	A6NFY7	115 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	LEPROT	O15243	131 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	DEFB1	P60022	68 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	ZFAND6	Q6FIF0	208 aa		10.3	□□□□□ -0.76
UBE2F-223	ENST00000612130	CCL21	O00585	134 aa		10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 1321 ms