RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 C16orf92Q96LL3 132 aa13.49□□□□□ -0.25
TNIP1-221ENST00000610874 H3BMG7 143 aa13.49□□□□□ -0.25
TNIP1-221ENST00000610874 M0R381 172 aa13.49□□□□□ -0.25
TNIP1-221ENST00000610874 HLA-DRB4P13762 266 aa13.49□□□□□ -0.25
TNIP1-221ENST00000610874 PLNP26678 52 aa13.49□□□□□ -0.25
TNIP1-221ENST00000610874 AMTNQ6UX39 209 aa13.49□□□□□ -0.25
TNIP1-221ENST00000610874 HLA-DRB4X5D2U9 266 aa13.49□□□□□ -0.25
TNIP1-221ENST00000610874 EEF1AKMT3Q96AZ1 226 aa13.48□□□□□ -0.25
TNIP1-221ENST00000610874 SMIM2Q9BVW6 85 aa13.48□□□□□ -0.25
TNIP1-221ENST00000610874 FOXI2Q6ZQN5 318 aa13.48□□□□□ -0.25
TNIP1-221ENST00000610874 Q6ZS46 218 aa13.48□□□□□ -0.25
TNIP1-221ENST00000610874 PRSS47A8MTI9 375 aa13.47□□□□□ -0.25
TNIP1-221ENST00000610874 B4DSR2 109 aa13.47□□□□□ -0.25
TNIP1-221ENST00000610874 HIST2H2BCQ6DN03 193 aa13.47□□□□□ -0.25
TNIP1-221ENST00000610874 C9orf47Q6ZRZ4 202 aa13.47□□□□□ -0.25
TNIP1-221ENST00000610874 F8VRH5 84 aa13.47□□□□□ -0.25
TNIP1-221ENST00000610874 BLCAPP62952 87 aa13.47□□□□□ -0.25
TNIP1-221ENST00000610874 SCGB3A1Q96QR1 104 aa13.47□□□□□ -0.25
TNIP1-221ENST00000610874 MOB4Q9Y3A3 225 aa13.47□□□□□ -0.25
TNIP1-221ENST00000610874 HELZ2Q9BYK8 2649 aaKnown RBP13.47□□□□□ -0.25
TNIP1-221ENST00000610874 RNF223E7ERA6 249 aa13.46□□□□□ -0.25
TNIP1-221ENST00000610874 H7C1H1 209 aa13.46□□□□□ -0.25
TNIP1-221ENST00000610874 LCNL1Q6ZST4 164 aa13.46□□□□□ -0.25
TNIP1-221ENST00000610874 GTSF1LQ9H1H1 148 aa13.46□□□□□ -0.25
TNIP1-221ENST00000610874 SONP18583 2426 aaKnown RBP13.46□□□□□ -0.25
TNIP1-221ENST00000610874 CHTOPQ9Y3Y2 248 aaKnown RBP13.46□□□□□ -0.25
TNIP1-221ENST00000610874 OR11H12B2RN74 326 aa13.45□□□□□ -0.26
TNIP1-221ENST00000610874 TGFAP01135 160 aa13.45□□□□□ -0.26
TNIP1-221ENST00000610874 DEFB1P60022 68 aa13.45□□□□□ -0.26
TNIP1-221ENST00000610874 TAL2Q16559 108 aa13.45□□□□□ -0.26
TNIP1-221ENST00000610874 SAMD13Q5VXD3 122 aa13.45□□□□□ -0.26
TNIP1-221ENST00000610874 SH2D6Q7Z4S9 175 aa13.45□□□□□ -0.26
TNIP1-221ENST00000610874 OR11H1Q8NG94 326 aa13.45□□□□□ -0.26
TNIP1-221ENST00000610874 OR11H2Q8NH07 326 aa13.45□□□□□ -0.26
TNIP1-221ENST00000610874 RPL39LQ96EH5 51 aaKnown RBP13.45□□□□□ -0.26
TNIP1-221ENST00000610874 IGHV4-4A0A075B6R2 117 aa13.45□□□□□ -0.26
TNIP1-221ENST00000610874 MRAP2Q96G30 205 aa13.45□□□□□ -0.26
TNIP1-221ENST00000610874 C20orf173Q96LM9 149 aa13.45□□□□□ -0.26
TNIP1-221ENST00000610874 PRRC2AP48634 2157 aaKnown RBP13.44□□□□□ -0.26
TNIP1-221ENST00000610874 S100A4P26447 101 aaKnown RBP13.44□□□□□ -0.26
TNIP1-221ENST00000610874 ETDBQ3ZM63 59 aa13.44□□□□□ -0.26
TNIP1-221ENST00000610874 MRPL53Q96EL3 112 aaKnown RBP13.44□□□□□ -0.26
TNIP1-221ENST00000610874 CYSLTR1Q9Y271 337 aa13.44□□□□□ -0.26
TNIP1-221ENST00000610874 F8W1H4 67 aa13.44□□□□□ -0.26
TNIP1-221ENST00000610874 SUMO2P61956 95 aaKnown RBP13.44□□□□□ -0.26
TNIP1-221ENST00000610874 C14orf178Q8N769 122 aaPredicted RBP13.44□□□□□ -0.26
TNIP1-221ENST00000610874 SPANXB1Q9NS25 103 aaPredicted RBP13.44□□□□□ -0.26
TNIP1-221ENST00000610874 TSSC4Q9Y5U2 329 aaPredicted RBP13.44□□□□□ -0.26
TNIP1-221ENST00000610874 TRBV7-1A0A0A6YYK4 115 aa13.43□□□□□ -0.26
TNIP1-221ENST00000610874 TRAV41A0A0B4J266 112 aa13.43□□□□□ -0.26
TNIP1-221ENST00000610874 MYMXA0A1B0GTQ4 84 aa13.43□□□□□ -0.26
TNIP1-221ENST00000610874 MGPP08493 103 aa13.43□□□□□ -0.26
TNIP1-221ENST00000610874 TRBV7-3A0A075B6L6 115 aa13.43□□□□□ -0.26
TNIP1-221ENST00000610874 RASL10AQ92737 203 aa13.43□□□□□ -0.26
TNIP1-221ENST00000610874 AZU1P20160 251 aa13.43□□□□□ -0.26
TNIP1-221ENST00000610874 ATP5G2Q06055 141 aa13.43□□□□□ -0.26
TNIP1-221ENST00000610874 SMAGPQ0VAQ4 97 aa13.43□□□□□ -0.26
TNIP1-221ENST00000610874 ORMDL2Q53FV1 153 aa13.43□□□□□ -0.26
TNIP1-221ENST00000610874 TRAV12-1A0A0B4J245 112 aa13.42□□□□□ -0.26
TNIP1-221ENST00000610874 RRN3P1Q2M238 152 aa13.42□□□□□ -0.26
TNIP1-221ENST00000610874 SCGB2A2Q13296 93 aa13.42□□□□□ -0.26
TNIP1-221ENST00000610874 TOMM6Q96B49 74 aa13.42□□□□□ -0.26
TNIP1-221ENST00000610874 U3KQE9 123 aa13.42□□□□□ -0.26
TNIP1-221ENST00000610874 TMEM95Q3KNT9 176 aa13.41□□□□□ -0.26
TNIP1-221ENST00000610874 PHLDA3Q9Y5J5 127 aa13.41□□□□□ -0.26
TNIP1-221ENST00000610874 NEXN-AS1Q8NBZ9 246 aa13.41□□□□□ -0.26
TNIP1-221ENST00000610874 DEFB104AQ8WTQ1 72 aa13.41□□□□□ -0.26
TNIP1-221ENST00000610874 ITPR3Q14573 2671 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 A0A096LNT2 108 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 IGHV3-11P01762 117 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 DSCR9P59020 149 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 GAGE13Q4V321 117 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 C2orf66Q6UXQ4 117 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 LINC01356Q8N9X3 169 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 SIGMAR1Q99720 223 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 CUBNO60494 3623 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 ITPR2Q14571 2701 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 IGKV3-7A0A075B6H7 116 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 TRBV12-3P01733 135 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 IGHV4-59P01825 116 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 SLC25A16P16260 332 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 C9orf139Q6ZV77 190 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 ZFAND2AQ8N6M9 145 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 GLMPQ8WWB7 406 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 BAALCQ8WXS3 180 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 DPH3P1Q9H4G8 78 aa13.4□□□□□ -0.26
TNIP1-221ENST00000610874 MYO9AB2RTY4 2548 aa13.39□□□□□ -0.27
TNIP1-221ENST00000610874 GAGE12HA6NDE8 117 aa13.39□□□□□ -0.27
TNIP1-221ENST00000610874 A6NDX4 124 aa13.39□□□□□ -0.27
TNIP1-221ENST00000610874 J3QR89 54 aa13.39□□□□□ -0.27
TNIP1-221ENST00000610874 LGALS1P09382 135 aaKnown RBP13.39□□□□□ -0.27
TNIP1-221ENST00000610874 KLK9Q2XQG4 91 aa13.39□□□□□ -0.27
TNIP1-221ENST00000610874 DEFB112Q30KQ8 113 aa13.39□□□□□ -0.27
TNIP1-221ENST00000610874 UNQ9165/PRO28630Q6UXU0 137 aa13.39□□□□□ -0.27
TNIP1-221ENST00000610874 PRADC1Q9BSG0 188 aa13.39□□□□□ -0.27
TNIP1-221ENST00000610874 KLK9Q9UKQ9 250 aa13.39□□□□□ -0.27
TNIP1-221ENST00000610874 ASIPP42127 132 aa13.39□□□□□ -0.27
TNIP1-221ENST00000610874 RPL11P62913 178 aaKnown RBP13.39□□□□□ -0.27
TNIP1-221ENST00000610874 ANXA2RQ3ZCQ2 193 aa13.39□□□□□ -0.27
TNIP1-221ENST00000610874 OR10J6PQ8NGY7 276 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms