RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 NRACQ8N912 160 aa10.19□□□□□ -0.78
NEK3-205ENST00000610828 TCTEX1D4Q5JR98 221 aa10.18□□□□□ -0.78
NEK3-205ENST00000610828 IFI27L1Q96BM0 104 aa10.18□□□□□ -0.78
NEK3-205ENST00000610828 C18orf15Q96N68 181 aa10.18□□□□□ -0.78
NEK3-205ENST00000610828 A0A0J9YX75 114 aa10.18□□□□□ -0.78
NEK3-205ENST00000610828 LINC01546A6NGU7 62 aa10.18□□□□□ -0.78
NEK3-205ENST00000610828 MED14OSP0DP75 135 aa10.18□□□□□ -0.78
NEK3-205ENST00000610828 PLA2G2AP14555 144 aa10.18□□□□□ -0.78
NEK3-205ENST00000610828 C14orf178Q8N769 122 aaPredicted RBP10.18□□□□□ -0.78
NEK3-205ENST00000610828 Q8N8P6 123 aa10.18□□□□□ -0.78
NEK3-205ENST00000610828 OR11H1Q8NG94 326 aa10.18□□□□□ -0.78
NEK3-205ENST00000610828 SCRT2Q9NQ03 307 aa10.18□□□□□ -0.78
NEK3-205ENST00000610828 TP73-AS1Q9UF72 201 aa10.18□□□□□ -0.78
NEK3-205ENST00000610828 J3QKU1 62 aa10.17□□□□□ -0.78
NEK3-205ENST00000610828 DUX3Q96PT4 197 aa10.17□□□□□ -0.78
NEK3-205ENST00000610828 GOLT1BQ9Y3E0 138 aa10.17□□□□□ -0.78
NEK3-205ENST00000610828 TRAV12-2A0A075B6T6 113 aa10.17□□□□□ -0.78
NEK3-205ENST00000610828 FCER1GP30273 86 aa10.17□□□□□ -0.78
NEK3-205ENST00000610828 COL5A1-AS1Q5SY13 56 aa10.17□□□□□ -0.78
NEK3-205ENST00000610828 HIST2H2BDQ6DRA6 164 aa10.17□□□□□ -0.78
NEK3-205ENST00000610828 ADAMTSL5Q6ZMM2 481 aa10.17□□□□□ -0.78
NEK3-205ENST00000610828 MRAP2Q96G30 205 aa10.17□□□□□ -0.78
NEK3-205ENST00000610828 DPH3P1Q9H4G8 78 aa10.17□□□□□ -0.78
NEK3-205ENST00000610828 IGLV2-18A0A075B6J9 118 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 C7orf71A4D174 169 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 LINC01619G3V211 115 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 TEX29Q8N6K0 151 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 DPF1Q92782 380 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 SORL1Q92673 2214 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 AGRNO00468 2067 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 MGPP08493 103 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 CD7P09564 240 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 HINT1P49773 126 aaPredicted RBP10.16□□□□□ -0.78
NEK3-205ENST00000610828 LGALS9BQ3B8N2 356 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 LGALS9CQ6DKI2 356 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 TMEM86BQ8N661 226 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 STPG4Q8N801 248 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 TMEM158Q8WZ71 300 aa10.16□□□□□ -0.78
NEK3-205ENST00000610828 MRPS16Q9Y3D3 137 aaKnown RBP10.16□□□□□ -0.78
NEK3-205ENST00000610828 DNAJC9-AS1A6NH13 148 aa10.15□□□□□ -0.78
NEK3-205ENST00000610828 COTL1Q14019 142 aa10.15□□□□□ -0.78
NEK3-205ENST00000610828 Q6ZSV7 163 aa10.15□□□□□ -0.78
NEK3-205ENST00000610828 C4orf3Q8WVX3 66 aa10.15□□□□□ -0.78
NEK3-205ENST00000610828 AP1S3Q96PC3 154 aa10.15□□□□□ -0.78
NEK3-205ENST00000610828 ODF3Q96PU9 254 aa10.15□□□□□ -0.78
NEK3-205ENST00000610828 PDZD2O15018 2839 aa10.15□□□□□ -0.79
NEK3-205ENST00000610828 SPINK13Q1W4C9 94 aa10.15□□□□□ -0.79
NEK3-205ENST00000610828 KLHL30-AS1Q8NEE0 82 aa10.15□□□□□ -0.79
NEK3-205ENST00000610828 TMEM208Q9BTX3 173 aa10.15□□□□□ -0.79
NEK3-205ENST00000610828 CDKN1BP46527 198 aa10.14□□□□□ -0.79
NEK3-205ENST00000610828 LAGE3Q14657 143 aa10.14□□□□□ -0.79
NEK3-205ENST00000610828 SLC25A34Q6PIV7 304 aa10.14□□□□□ -0.79
NEK3-205ENST00000610828 OR1N2Q8NGR9 330 aa10.14□□□□□ -0.79
NEK3-205ENST00000610828 KMT2BQ9UMN6 2715 aaPredicted RBP10.14□□□□□ -0.79
NEK3-205ENST00000610828 MUC4Q99102 2169 aa10.14□□□□□ -0.79
NEK3-205ENST00000610828 CD5LO43866 347 aa10.14□□□□□ -0.79
NEK3-205ENST00000610828 DEFB125Q8N687 156 aa10.14□□□□□ -0.79
NEK3-205ENST00000610828 OR9G4Q8NGQ1 327 aa10.14□□□□□ -0.79
NEK3-205ENST00000610828 PEMTQ9UBM1 199 aa10.14□□□□□ -0.79
NEK3-205ENST00000610828 HELZ2Q9BYK8 2649 aaKnown RBP10.13□□□□□ -0.79
NEK3-205ENST00000610828 NF1P21359 2839 aa10.13□□□□□ -0.79
NEK3-205ENST00000610828 FOXI2Q6ZQN5 318 aa10.13□□□□□ -0.79
NEK3-205ENST00000610828 RASL10AQ92737 203 aa10.13□□□□□ -0.79
NEK3-205ENST00000610828 RPL39LQ96EH5 51 aaKnown RBP10.13□□□□□ -0.79
NEK3-205ENST00000610828 DUSP14O95147 198 aaKnown RBP10.12□□□□□ -0.79
NEK3-205ENST00000610828 SMIM2Q9BVW6 85 aa10.12□□□□□ -0.79
NEK3-205ENST00000610828 ITPR2Q14571 2701 aa10.12□□□□□ -0.79
NEK3-205ENST00000610828 DLEU1O43261 78 aa10.12□□□□□ -0.79
NEK3-205ENST00000610828 NXPH4O95158 308 aa10.12□□□□□ -0.79
NEK3-205ENST00000610828 PRSS1P07477 247 aa10.12□□□□□ -0.79
NEK3-205ENST00000610828 SMIM17P0DL12 118 aa10.12□□□□□ -0.79
NEK3-205ENST00000610828 SUMO2P61956 95 aaKnown RBP10.12□□□□□ -0.79
NEK3-205ENST00000610828 DLX4Q92988 240 aaPredicted RBP10.12□□□□□ -0.79
NEK3-205ENST00000610828 ESM1Q9NQ30 184 aa10.12□□□□□ -0.79
NEK3-205ENST00000610828 DKK2Q9UBU2 259 aa10.12□□□□□ -0.79
NEK3-205ENST00000610828 C11orf44Q8N8P7 122 aa10.11□□□□□ -0.79
NEK3-205ENST00000610828 JPT2Q9H910 190 aa10.11□□□□□ -0.79
NEK3-205ENST00000610828 TCTAP57738 103 aa10.11□□□□□ -0.79
NEK3-205ENST00000610828 DEFB131AP59861 70 aa10.11□□□□□ -0.79
NEK3-205ENST00000610828 Q8N1Y9 231 aa10.11□□□□□ -0.79
NEK3-205ENST00000610828 KNCNA6PVL3 124 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 NUDT3O95989 172 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 NPSP0C0P6 89 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 TMEM61Q8N0U2 210 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 C20orf78Q9BR46 151 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 YAE1D1Q9NRH1 226 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 MDFICQ9P1T7 246 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 CHTOPQ9Y3Y2 248 aaKnown RBP10.1□□□□□ -0.79
NEK3-205ENST00000610828 ACANP16112 2415 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 IGHV1OR15-1A0A075B7D0 117 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 IGHV3-16A0A0C4DH30 117 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 KRTAP1-1Q07627 177 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 AMTNQ6UX39 209 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 DYNLRB2Q8TF09 96 aa10.1□□□□□ -0.79
NEK3-205ENST00000610828 A0A087WWL8 130 aa10.09□□□□□ -0.79
NEK3-205ENST00000610828 COX8AP10176 69 aa10.09□□□□□ -0.79
NEK3-205ENST00000610828 FOXC2Q99958 501 aa10.09□□□□□ -0.79
NEK3-205ENST00000610828 KIF25-AS1Q9Y6Z4 181 aa10.09□□□□□ -0.79
NEK3-205ENST00000610828 ATP5LO75964 103 aa10.09□□□□□ -0.79
NEK3-205ENST00000610828 ODF1Q14990 250 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms