RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 ICOSQ9Y6W8 199 aa9.93□□□□□ -0.82
HDDC2-209ENST00000609477 A0A096LPF7 62 aa9.92□□□□□ -0.82
HDDC2-209ENST00000609477 A8MWV9 139 aa9.92□□□□□ -0.82
HDDC2-209ENST00000609477 C9JCJ5 164 aa9.92□□□□□ -0.82
HDDC2-209ENST00000609477 PGPEP1LA6NFU8 196 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 RS1O15537 224 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 NDUFS6O75380 124 aaKnown RBP9.91□□□□□ -0.82
HDDC2-209ENST00000609477 SFTA3P0C7M3 94 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 ZNF506Q5JVG8 444 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 CFAP126Q5VTH2 177 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 ZFP2Q6ZN57 461 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 SH2D6Q7Z4S9 175 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 SYT8Q8NBV8 401 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 UPK3BQ9BT76 320 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 BIN3Q9NQY0 253 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 MED9Q9NWA0 146 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 LINC00588Q9Y4M8 146 aa9.91□□□□□ -0.82
HDDC2-209ENST00000609477 M0R036 132 aa9.9□□□□□ -0.82
HDDC2-209ENST00000609477 ARMS2P0C7Q2 107 aa9.9□□□□□ -0.82
HDDC2-209ENST00000609477 GNG4P50150 75 aa9.9□□□□□ -0.82
HDDC2-209ENST00000609477 NHLRC2Q8NBF2 726 aa9.9□□□□□ -0.82
HDDC2-209ENST00000609477 ZNRF2Q8NHG8 242 aa9.9□□□□□ -0.82
HDDC2-209ENST00000609477 PCNPQ8WW12 178 aaKnown RBP9.9□□□□□ -0.82
HDDC2-209ENST00000609477 DERL1Q9BUN8 251 aa9.9□□□□□ -0.82
HDDC2-209ENST00000609477 SCRT2Q9NQ03 307 aa9.9□□□□□ -0.82
HDDC2-209ENST00000609477 NACAE9PAV3 2078 aa9.9□□□□□ -0.82
HDDC2-209ENST00000609477 DNAH6Q9C0G6 4158 aa9.89□□□□□ -0.83
HDDC2-209ENST00000609477 TRBV6-4A0A1B0GX49 114 aa9.89□□□□□ -0.83
HDDC2-209ENST00000609477 RBFOX3A6NFN3 312 aa9.89□□□□□ -0.83
HDDC2-209ENST00000609477 TMEM250H0YL14 139 aa9.89□□□□□ -0.83
HDDC2-209ENST00000609477 MGST1P10620 155 aaKnown RBP9.89□□□□□ -0.83
HDDC2-209ENST00000609477 GATA1P15976 413 aaPredicted RBP9.89□□□□□ -0.83
HDDC2-209ENST00000609477 ESRGQ1W209 222 aa9.89□□□□□ -0.83
HDDC2-209ENST00000609477 CENPWQ5EE01 88 aa9.89□□□□□ -0.83
HDDC2-209ENST00000609477 Q6ZR54 194 aa9.89□□□□□ -0.83
HDDC2-209ENST00000609477 NEGR1Q7Z3B1 354 aa9.89□□□□□ -0.83
HDDC2-209ENST00000609477 ZNF575Q86XF7 245 aa9.89□□□□□ -0.83
HDDC2-209ENST00000609477 MRPS16Q9Y3D3 137 aaKnown RBP9.89□□□□□ -0.83
HDDC2-209ENST00000609477 BOLA1Q9Y3E2 137 aa9.89□□□□□ -0.83
HDDC2-209ENST00000609477 PHLDA3Q9Y5J5 127 aa9.89□□□□□ -0.83
HDDC2-209ENST00000609477 H3BVH4 76 aa9.88□□□□□ -0.83
HDDC2-209ENST00000609477 K7EQD1 137 aa9.88□□□□□ -0.83
HDDC2-209ENST00000609477 DAZAP1Q96EP5 407 aaKnown RBP9.88□□□□□ -0.83
HDDC2-209ENST00000609477 GRIFINA4D1Z8 144 aa9.87□□□□□ -0.83
HDDC2-209ENST00000609477 RHODO00212 210 aa9.87□□□□□ -0.83
HDDC2-209ENST00000609477 IGLV2-8P01709 118 aa9.87□□□□□ -0.83
HDDC2-209ENST00000609477 GYPEP15421 78 aa9.87□□□□□ -0.83
HDDC2-209ENST00000609477 SRIP30626 198 aa9.87□□□□□ -0.83
HDDC2-209ENST00000609477 RHOHQ15669 191 aa9.87□□□□□ -0.83
HDDC2-209ENST00000609477 PRR27Q6MZM9 219 aa9.87□□□□□ -0.83
HDDC2-209ENST00000609477 LINC00336Q6ZUF6 198 aa9.87□□□□□ -0.83
HDDC2-209ENST00000609477 ZFP82Q8N141 532 aa9.87□□□□□ -0.83
HDDC2-209ENST00000609477 PRADC1Q9BSG0 188 aa9.87□□□□□ -0.83
HDDC2-209ENST00000609477 SSBP4Q9BWG4 385 aaPredicted RBP9.87□□□□□ -0.83
HDDC2-209ENST00000609477 Q9H8V8 135 aa9.87□□□□□ -0.83
HDDC2-209ENST00000609477 OR5AL1P0C617 328 aa9.86□□□□□ -0.83
HDDC2-209ENST00000609477 BTF3P20290 206 aaKnown RBP9.86□□□□□ -0.83
HDDC2-209ENST00000609477 RPS20P60866 119 aaKnown RBP9.86□□□□□ -0.83
HDDC2-209ENST00000609477 SOHLH1Q5JUK2 328 aa9.86□□□□□ -0.83
HDDC2-209ENST00000609477 DMRTA1Q5VZB9 504 aa9.86□□□□□ -0.83
HDDC2-209ENST00000609477 TEX261Q6UWH6 196 aa9.86□□□□□ -0.83
HDDC2-209ENST00000609477 SLC25A29Q8N8R3 303 aa9.86□□□□□ -0.83
HDDC2-209ENST00000609477 PARLQ9H300 379 aa9.86□□□□□ -0.83
HDDC2-209ENST00000609477 TRBV20OR9-2A0A075B6H5 130 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 IGLV2-18A0A075B6J9 118 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 TMSB15BA0A087X1C1 80 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 NBDYA0A0U1RRE5 68 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 A0A1W2PPQ1 181 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 XKRY2A2RUG3 117 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 RAB19A4D1S5 217 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 C19orf71A6NCJ1 209 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 SNAI2O43623 268 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 TIRAPP58753 221 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 TTC32Q5I0X7 151 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 LYPD5Q6UWN5 251 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 SFRP2Q96HF1 295 aa9.85□□□□□ -0.83
HDDC2-209ENST00000609477 K7EP13 123 aa9.84□□□□□ -0.83
HDDC2-209ENST00000609477 M0R2N4 97 aa9.84□□□□□ -0.83
HDDC2-209ENST00000609477 NXPH4O95158 308 aa9.84□□□□□ -0.83
HDDC2-209ENST00000609477 UFSP1Q6NVU6 142 aa9.84□□□□□ -0.83
HDDC2-209ENST00000609477 FAM210AQ96ND0 272 aa9.84□□□□□ -0.83
HDDC2-209ENST00000609477 EIF5A2Q9GZV4 153 aaKnown RBP9.84□□□□□ -0.83
HDDC2-209ENST00000609477 M0R381 172 aa9.83□□□□□ -0.84
HDDC2-209ENST00000609477 P01737 135 aa9.83□□□□□ -0.84
HDDC2-209ENST00000609477 RPL19P84098 196 aaKnown RBP9.83□□□□□ -0.84
HDDC2-209ENST00000609477 LY96Q9Y6Y9 160 aa9.83□□□□□ -0.84
HDDC2-209ENST00000609477 SIVA1O15304 175 aa9.82□□□□□ -0.84
HDDC2-209ENST00000609477 C1orf134Q5TEV5 83 aa9.82□□□□□ -0.84
HDDC2-209ENST00000609477 IGHV3-73A0A0B4J1V6 119 aa9.81□□□□□ -0.84
HDDC2-209ENST00000609477 F2Z2F3 143 aa9.81□□□□□ -0.84
HDDC2-209ENST00000609477 CRYGDP07320 174 aa9.81□□□□□ -0.84
HDDC2-209ENST00000609477 TOR2AQ5JU69 321 aa9.81□□□□□ -0.84
HDDC2-209ENST00000609477 SPANXN1Q5VSR9 72 aa9.81□□□□□ -0.84
HDDC2-209ENST00000609477 OR2D3Q8NGH3 330 aa9.81□□□□□ -0.84
HDDC2-209ENST00000609477 SMDT1Q9H4I9 107 aa9.81□□□□□ -0.84
HDDC2-209ENST00000609477 IGLC6P0CF74 106 aa9.8□□□□□ -0.84
HDDC2-209ENST00000609477 OR10AG1Q8NH19 301 aa9.8□□□□□ -0.84
HDDC2-209ENST00000609477 OCC1Q8TAD7 63 aa9.8□□□□□ -0.84
HDDC2-209ENST00000609477 SAMD10Q9BYL1 202 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms