RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ASIPP42127 132 aa11.91□□□□□ -0.5
CTSA-214ENST00000606788 FAM74A4Q5TZK3 123 aa11.91□□□□□ -0.5
CTSA-214ENST00000606788 GATD1Q8NB37 220 aa11.91□□□□□ -0.5
CTSA-214ENST00000606788 U3KQK5 164 aa11.91□□□□□ -0.5
CTSA-214ENST00000606788 ID1P41134 155 aa11.9□□□□□ -0.5
CTSA-214ENST00000606788 KLHL30-AS1Q8NEE0 82 aa11.9□□□□□ -0.5
CTSA-214ENST00000606788 ATP6V0BQ99437 205 aa11.9□□□□□ -0.5
CTSA-214ENST00000606788 DKK2Q9UBU2 259 aa11.9□□□□□ -0.5
CTSA-214ENST00000606788 HBDP02042 147 aa11.9□□□□□ -0.51
CTSA-214ENST00000606788 OR2K2Q8NGT1 345 aa11.9□□□□□ -0.51
CTSA-214ENST00000606788 TMEM158Q8WZ71 300 aa11.9□□□□□ -0.51
CTSA-214ENST00000606788 DPF1Q92782 380 aa11.9□□□□□ -0.51
CTSA-214ENST00000606788 C2orf88Q9BSF0 95 aa11.9□□□□□ -0.51
CTSA-214ENST00000606788 HSBP1L1C9JCN9 74 aa11.89□□□□□ -0.51
CTSA-214ENST00000606788 TSPOP30536 169 aa11.89□□□□□ -0.51
CTSA-214ENST00000606788 ADAMTSL5Q6ZMM2 481 aa11.89□□□□□ -0.51
CTSA-214ENST00000606788 YAE1D1Q9NRH1 226 aa11.89□□□□□ -0.51
CTSA-214ENST00000606788 KMT2BQ9UMN6 2715 aaPredicted RBP11.89□□□□□ -0.51
CTSA-214ENST00000606788 FAM159AQ6UWV7 190 aa11.89□□□□□ -0.51
CTSA-214ENST00000606788 PRSS1P07477 247 aa11.88□□□□□ -0.51
CTSA-214ENST00000606788 IFI27L1Q96BM0 104 aa11.88□□□□□ -0.51
CTSA-214ENST00000606788 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
CTSA-214ENST00000606788 MDFICQ9P1T7 246 aa11.88□□□□□ -0.51
CTSA-214ENST00000606788 F5H697 171 aa11.88□□□□□ -0.51
CTSA-214ENST00000606788 RNASE3P12724 160 aaKnown RBP11.88□□□□□ -0.51
CTSA-214ENST00000606788 SNRPD3P62318 126 aaKnown RBP11.88□□□□□ -0.51
CTSA-214ENST00000606788 ESM1Q9NQ30 184 aa11.88□□□□□ -0.51
CTSA-214ENST00000606788 DEFB131AP59861 70 aa11.87□□□□□ -0.51
CTSA-214ENST00000606788 GOLT1BQ9Y3E0 138 aa11.87□□□□□ -0.51
CTSA-214ENST00000606788 OTOGQ6ZRI0 2925 aa11.87□□□□□ -0.51
CTSA-214ENST00000606788 ELANEP08246 267 aa11.87□□□□□ -0.51
CTSA-214ENST00000606788 DLX4Q92988 240 aaPredicted RBP11.87□□□□□ -0.51
CTSA-214ENST00000606788 TTTY13Q9BZ97 58 aa11.87□□□□□ -0.51
CTSA-214ENST00000606788 LAMTOR2Q9Y2Q5 125 aa11.87□□□□□ -0.51
CTSA-214ENST00000606788 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
CTSA-214ENST00000606788 K7EMT4 169 aa11.86□□□□□ -0.51
CTSA-214ENST00000606788 PLA2G2AP14555 144 aa11.86□□□□□ -0.51
CTSA-214ENST00000606788 ANKRD39Q53RE8 183 aa11.86□□□□□ -0.51
CTSA-214ENST00000606788 PET117Q6UWS5 81 aa11.86□□□□□ -0.51
CTSA-214ENST00000606788 APRG1Q8IVJ8 170 aa11.86□□□□□ -0.51
CTSA-214ENST00000606788 UBE2E2Q96LR5 201 aa11.86□□□□□ -0.51
CTSA-214ENST00000606788 BRI3O95415 125 aa11.86□□□□□ -0.51
CTSA-214ENST00000606788 NUTF2P61970 127 aaKnown RBP11.86□□□□□ -0.51
CTSA-214ENST00000606788 Q6ZSV7 163 aa11.86□□□□□ -0.51
CTSA-214ENST00000606788 J3QKU1 62 aa11.85□□□□□ -0.51
CTSA-214ENST00000606788 CRXO43186 299 aaPredicted RBP11.85□□□□□ -0.51
CTSA-214ENST00000606788 ZNF25P17030 456 aaPredicted RBP11.85□□□□□ -0.51
CTSA-214ENST00000606788 TMEM61Q8N0U2 210 aa11.85□□□□□ -0.51
CTSA-214ENST00000606788 LINC01545Q5VT33 79 aa11.85□□□□□ -0.51
CTSA-214ENST00000606788 NRACQ8N912 160 aa11.85□□□□□ -0.51
CTSA-214ENST00000606788 IGHV3-73A0A0B4J1V6 119 aa11.84□□□□□ -0.51
CTSA-214ENST00000606788 K7EQG2 157 aa11.84□□□□□ -0.51
CTSA-214ENST00000606788 NMUP48645 174 aa11.84□□□□□ -0.51
CTSA-214ENST00000606788 FOXC2Q99958 501 aa11.84□□□□□ -0.51
CTSA-214ENST00000606788 A0A0J9YX75 114 aa11.84□□□□□ -0.51
CTSA-214ENST00000606788 MPV17L2Q567V2 206 aa11.84□□□□□ -0.51
CTSA-214ENST00000606788 LRRC75A-AS1Q8N1F1 130 aa11.84□□□□□ -0.51
CTSA-214ENST00000606788 C7orf71A4D174 169 aa11.83□□□□□ -0.52
CTSA-214ENST00000606788 CD5LO43866 347 aa11.83□□□□□ -0.52
CTSA-214ENST00000606788 PPBPP02775 128 aa11.83□□□□□ -0.52
CTSA-214ENST00000606788 OR1N2Q8NGR9 330 aa11.83□□□□□ -0.52
CTSA-214ENST00000606788 NUDT3O95989 172 aa11.83□□□□□ -0.52
CTSA-214ENST00000606788 Q8N1Y9 231 aa11.83□□□□□ -0.52
CTSA-214ENST00000606788 LENEPQ9Y5L5 61 aa11.83□□□□□ -0.52
CTSA-214ENST00000606788 SMIM17P0DL12 118 aa11.82□□□□□ -0.52
CTSA-214ENST00000606788 DYNLRB2Q8TF09 96 aa11.82□□□□□ -0.52
CTSA-214ENST00000606788 RASL10AQ92737 203 aa11.82□□□□□ -0.52
CTSA-214ENST00000606788 FAM19A4Q96LR4 140 aa11.82□□□□□ -0.52
CTSA-214ENST00000606788 SLC25A34Q6PIV7 304 aa11.82□□□□□ -0.52
CTSA-214ENST00000606788 KLLNB2CW77 178 aa11.81□□□□□ -0.52
CTSA-214ENST00000606788 LINC01619G3V211 115 aa11.81□□□□□ -0.52
CTSA-214ENST00000606788 CD28P10747 220 aa11.81□□□□□ -0.52
CTSA-214ENST00000606788 ZNF580Q9UK33 172 aa11.81□□□□□ -0.52
CTSA-214ENST00000606788 NBEAL2Q6ZNJ1 2754 aa11.81□□□□□ -0.52
CTSA-214ENST00000606788 IGHV3OR16-12A0A075B7B8 117 aa11.8□□□□□ -0.52
CTSA-214ENST00000606788 DPH3P1Q9H4G8 78 aa11.8□□□□□ -0.52
CTSA-214ENST00000606788 NXT2Q9NPJ8 142 aaKnown RBP11.8□□□□□ -0.52
CTSA-214ENST00000606788 TMEM160Q9NX00 188 aa11.8□□□□□ -0.52
CTSA-214ENST00000606788 ANK3Q12955 4377 aaKnown RBP11.8□□□□□ -0.52
CTSA-214ENST00000606788 PCP2Q8IVA1 136 aa11.8□□□□□ -0.52
CTSA-214ENST00000606788 Q8N8P6 123 aa11.8□□□□□ -0.52
CTSA-214ENST00000606788 FCER1GP30273 86 aa11.8□□□□□ -0.52
CTSA-214ENST00000606788 OR9G4Q8NGQ1 327 aa11.8□□□□□ -0.52
CTSA-214ENST00000606788 RBMY1A1P0DJD3 496 aaKnown RBP11.79□□□□□ -0.52
CTSA-214ENST00000606788 RBMY1CP0DJD4 496 aa11.79□□□□□ -0.52
CTSA-214ENST00000606788 CDKN1BP46527 198 aa11.79□□□□□ -0.52
CTSA-214ENST00000606788 RBMY1FQ15415 496 aaKnown RBP11.79□□□□□ -0.52
CTSA-214ENST00000606788 ZC2HC1BQ5TFG8 222 aa11.79□□□□□ -0.52
CTSA-214ENST00000606788 AP1S3Q96PC3 154 aa11.79□□□□□ -0.52
CTSA-214ENST00000606788 IGLV2-18A0A075B6J9 118 aa11.79□□□□□ -0.52
CTSA-214ENST00000606788 EMP1P54849 157 aa11.79□□□□□ -0.52
CTSA-214ENST00000606788 CD300EQ496F6 205 aaPredicted RBP11.79□□□□□ -0.52
CTSA-214ENST00000606788 MYOZ3Q8TDC0 251 aa11.79□□□□□ -0.52
CTSA-214ENST00000606788 ST20Q9HBF5 79 aa11.79□□□□□ -0.52
CTSA-214ENST00000606788 SCRT2Q9NQ03 307 aa11.79□□□□□ -0.52
CTSA-214ENST00000606788 VWFP04275 2813 aa11.78□□□□□ -0.52
CTSA-214ENST00000606788 CBY3A6NI87 242 aa11.78□□□□□ -0.52
CTSA-214ENST00000606788 SUMO2P61956 95 aaKnown RBP11.78□□□□□ -0.52
CTSA-214ENST00000606788 LAGE3Q14657 143 aa11.78□□□□□ -0.52
CTSA-214ENST00000606788 GTSCR1Q86UQ5 136 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 206.4 ms