RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 ERVFC1-1P60608 527 aa5.31□□□□□ -1.56
CUX2P1-201ENST00000606426 SRSF3P84103 164 aaKnown RBP5.31□□□□□ -1.56
CUX2P1-201ENST00000606426 ZNF876PQ49A33 203 aa5.31□□□□□ -1.56
CUX2P1-201ENST00000606426 CT83Q5H943 113 aa5.31□□□□□ -1.56
CUX2P1-201ENST00000606426 ZFAND6Q6FIF0 208 aa5.31□□□□□ -1.56
CUX2P1-201ENST00000606426 ZFP82Q8N141 532 aa5.31□□□□□ -1.56
CUX2P1-201ENST00000606426 C15orf54Q8N8G6 183 aa5.31□□□□□ -1.56
CUX2P1-201ENST00000606426 RPP21Q9H633 154 aaKnown RBP5.31□□□□□ -1.56
CUX2P1-201ENST00000606426 SCRT2Q9NQ03 307 aa5.31□□□□□ -1.56
CUX2P1-201ENST00000606426 MRPL16Q9NX20 251 aaKnown RBP5.31□□□□□ -1.56
CUX2P1-201ENST00000606426 TMSB15BA0A087X1C1 80 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 GRIFINA4D1Z8 144 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 A8MWL6 223 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 A8MWV9 139 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 C9JQL5 133 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 F2Z2F3 143 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 F5H768 121 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 H3BVH4 76 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 K7EN84 100 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 SNAI2O43623 268 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 GATCO43716 136 aaKnown RBP5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 SFTA3P0C7M3 94 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 HTN3P15516 51 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 PNRC1Q12796 327 aaPredicted RBP5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 SPANXN1Q5VSR9 72 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 C15orf53Q8NAA6 179 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 NUDT10Q8NFP7 164 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 OR4C5Q8NGB2 326 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 NUDT11Q96G61 164 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 SSBP4Q9BWG4 385 aaPredicted RBP5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 OSTCQ9NRP0 149 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 DNAH7Q8WXX0 4024 aa5.3□□□□□ -1.56
CUX2P1-201ENST00000606426 IGHV4-4A0A075B6R2 117 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 TRGV4A0A0C4DH28 118 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 LINC00862A6NCI5 91 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 FAM231BA6NCW3 169 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 IGLL5B9A064 214 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 H3BNG1 76 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 RHODO00212 210 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 RPL23P62829 140 aaKnown RBP5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 CACNG7P62955 275 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 RPL19P84098 196 aaKnown RBP5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 WDR73Q6P4I2 378 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 COMMD7Q86VX2 200 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 FER1L6-AS1Q8NA97 138 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 ISOC2Q96AB3 205 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 GFRA4Q9GZZ7 299 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 RNASE7Q9H1E1 156 aaKnown RBP5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 PRO0255Q9UI72 69 aa5.29□□□□□ -1.56
CUX2P1-201ENST00000606426 TMEM218A2RU14 115 aa5.28□□□□□ -1.56
CUX2P1-201ENST00000606426 M0R381 172 aa5.28□□□□□ -1.56
CUX2P1-201ENST00000606426 PPP1R2P9O14990 202 aa5.28□□□□□ -1.56
CUX2P1-201ENST00000606426 RS1O15537 224 aa5.28□□□□□ -1.56
CUX2P1-201ENST00000606426 IGLC6P0CF74 106 aa5.28□□□□□ -1.56
CUX2P1-201ENST00000606426 ADIRFQ15847 76 aa5.28□□□□□ -1.56
CUX2P1-201ENST00000606426 ZFP2Q6ZN57 461 aa5.28□□□□□ -1.56
CUX2P1-201ENST00000606426 OR10G8Q8NGN5 311 aa5.28□□□□□ -1.56
CUX2P1-201ENST00000606426 BORCS7Q96B45 105 aa5.28□□□□□ -1.56
CUX2P1-201ENST00000606426 SFRP2Q96HF1 295 aa5.28□□□□□ -1.56
CUX2P1-201ENST00000606426 HHLA3Q9XRX5 114 aa5.28□□□□□ -1.56
CUX2P1-201ENST00000606426 TRAV26-1A0A087WT03 109 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 F8W036 122 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 NXPH4O95158 308 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 IGHV3-53P01767 116 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 TRGC1P0CF51 173 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 SMIM17P0DL12 118 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 FOXA3P55318 350 aaPredicted RBP5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 CFAP126Q5VTH2 177 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 DMRTA1Q5VZB9 504 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 TMEM88Q6PEY1 159 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 ZNF575Q86XF7 245 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 TSKUQ8WUA8 353 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 ZNF479Q96JC4 524 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 AP1S3Q96PC3 154 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 TPPP3Q9BW30 176 aa5.27□□□□□ -1.57
CUX2P1-201ENST00000606426 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 TRBV6-4A0A1B0GX49 114 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 PAX4O43316 350 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 MT-ND4LP03901 98 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 P0DMU3 169 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 FAM231AP0DMU4 169 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 FAM231CP0DMU5 169 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 HOXA5P20719 270 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 CTRLP40313 264 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 CRYBA4P53673 196 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 FHL2Q14192 279 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 RHOHQ15669 191 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 LYZL1Q6UWQ5 148 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 SMIM15Q7Z3B0 74 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 SH2D6Q7Z4S9 175 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 POM121L12Q8N7R1 296 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 OR10AG1Q8NH19 301 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 ANAPC16Q96DE5 110 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 PRADC1Q9BSG0 188 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 SEC11CQ9BY50 192 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 CNFNQ9BYD5 112 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 APLNQ9ULZ1 77 aa5.26□□□□□ -1.57
CUX2P1-201ENST00000606426 NUDT3O95989 172 aa5.25□□□□□ -1.57
CUX2P1-201ENST00000606426 GZMBP10144 247 aa5.25□□□□□ -1.57
CUX2P1-201ENST00000606426 GATA1P15976 413 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms