RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 CCL19Q99731 98 aa1.66□□□□□ -2.14
HMGB1P51-201ENST00000605166 PSMG3Q9BT73 122 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P51-201ENST00000605166 LINC00470Q9BZP3 86 aa1.66□□□□□ -2.14
HMGB1P51-201ENST00000605166 GRIN2AQ12879 1464 aa1.66□□□□□ -2.14
HMGB1P51-201ENST00000605166 CASZ1Q86V15 1759 aa1.66□□□□□ -2.14
HMGB1P51-201ENST00000605166 MYH13Q9UKX3 1938 aa1.66□□□□□ -2.14
HMGB1P51-201ENST00000605166 TRBV30A0A0K0K1B3 111 aa1.65□□□□□ -2.15
HMGB1P51-201ENST00000605166 CCKP06307 115 aa1.65□□□□□ -2.15
HMGB1P51-201ENST00000605166 PRB4P10163 310 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P51-201ENST00000605166 SLC25A6P12236 298 aa1.65□□□□□ -2.15
HMGB1P51-201ENST00000605166 CCDC167Q9P0B6 97 aa1.65□□□□□ -2.15
HMGB1P51-201ENST00000605166 TMEM2Q9UHN6 1383 aa1.64□□□□□ -2.15
HMGB1P51-201ENST00000605166 NINQ8N4C6 2090 aa1.64□□□□□ -2.15
HMGB1P51-201ENST00000605166 NBDYA0A0U1RRE5 68 aa1.64□□□□□ -2.15
HMGB1P51-201ENST00000605166 LOC101927531A0A1B0GV80 90 aa1.64□□□□□ -2.15
HMGB1P51-201ENST00000605166 EMX2Q04743 252 aa1.64□□□□□ -2.15
HMGB1P51-201ENST00000605166 FXYD3Q14802 87 aa1.64□□□□□ -2.15
HMGB1P51-201ENST00000605166 LINC01545Q5VT33 79 aa1.64□□□□□ -2.15
HMGB1P51-201ENST00000605166 Q8N6K4 173 aa1.64□□□□□ -2.15
HMGB1P51-201ENST00000605166 MYOM3Q5VTT5 1437 aa1.64□□□□□ -2.15
HMGB1P51-201ENST00000605166 CDK12Q9NYV4 1490 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P51-201ENST00000605166 COL6A6A6NMZ7 2263 aa1.63□□□□□ -2.15
HMGB1P51-201ENST00000605166 CAV3P56539 151 aa1.63□□□□□ -2.15
HMGB1P51-201ENST00000605166 SPCS2Q15005 226 aa1.63□□□□□ -2.15
HMGB1P51-201ENST00000605166 Q86TA4 180 aa1.63□□□□□ -2.15
HMGB1P51-201ENST00000605166 NDUFA11Q86Y39 141 aa1.63□□□□□ -2.15
HMGB1P51-201ENST00000605166 KCNRGQ8N5I3 272 aa1.63□□□□□ -2.15
HMGB1P51-201ENST00000605166 OTOGLQ3ZCN5 2332 aa1.63□□□□□ -2.15
HMGB1P51-201ENST00000605166 PLXNA2O75051 1894 aa1.63□□□□□ -2.15
HMGB1P51-201ENST00000605166 MYH6P13533 1939 aa1.62□□□□□ -2.15
HMGB1P51-201ENST00000605166 GNG7O60262 68 aa1.62□□□□□ -2.15
HMGB1P51-201ENST00000605166 APOC1P02654 83 aa1.62□□□□□ -2.15
HMGB1P51-201ENST00000605166 RPL13AP3Q6NVV1 102 aa1.62□□□□□ -2.15
HMGB1P51-201ENST00000605166 Q6ZS92 163 aa1.62□□□□□ -2.15
HMGB1P51-201ENST00000605166 ZGRF1Q86YA3 2104 aa1.62□□□□□ -2.15
HMGB1P51-201ENST00000605166 IBTKQ9P2D0 1353 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P51-201ENST00000605166 CITO14578 2027 aa1.61□□□□□ -2.15
HMGB1P51-201ENST00000605166 A0A1W2PPM0 123 aa1.61□□□□□ -2.15
HMGB1P51-201ENST00000605166 SPANXN1Q5VSR9 72 aa1.61□□□□□ -2.15
HMGB1P51-201ENST00000605166 C5orf56Q8N8D9 126 aa1.61□□□□□ -2.15
HMGB1P51-201ENST00000605166 DPH3Q96FX2 82 aa1.61□□□□□ -2.15
HMGB1P51-201ENST00000605166 LINC00208Q96KT6 92 aa1.61□□□□□ -2.15
HMGB1P51-201ENST00000605166 CRCT1Q9UGL9 99 aa1.61□□□□□ -2.15
HMGB1P51-201ENST00000605166 NDUFA12Q9UI09 145 aa1.61□□□□□ -2.15
HMGB1P51-201ENST00000605166 SNRNP200O75643 2136 aaKnown RBP1.6□□□□□ -2.15
HMGB1P51-201ENST00000605166 TRAV12-2A0A075B6T6 113 aa1.6□□□□□ -2.15
HMGB1P51-201ENST00000605166 FAM25AB3EWG3 89 aa1.6□□□□□ -2.15
HMGB1P51-201ENST00000605166 FAM25CB3EWG5 89 aa1.6□□□□□ -2.15
HMGB1P51-201ENST00000605166 FAM25GB3EWG6 89 aa1.6□□□□□ -2.15
HMGB1P51-201ENST00000605166 TFF1P04155 84 aa1.6□□□□□ -2.15
HMGB1P51-201ENST00000605166 PIRTP0C851 137 aa1.6□□□□□ -2.15
HMGB1P51-201ENST00000605166 PTPRMP28827 1452 aa1.6□□□□□ -2.15
HMGB1P51-201ENST00000605166 TEX49A0A1B0GTD5 131 aa1.59□□□□□ -2.15
HMGB1P51-201ENST00000605166 OR2T2Q6IF00 324 aa1.59□□□□□ -2.15
HMGB1P51-201ENST00000605166 C10orf99Q6UWK7 81 aa1.59□□□□□ -2.15
HMGB1P51-201ENST00000605166 ATG2AQ2TAZ0 1938 aa1.59□□□□□ -2.15
HMGB1P51-201ENST00000605166 TMEM242Q9NWH2 141 aa1.58□□□□□ -2.16
HMGB1P51-201ENST00000605166 DLEC1Q9Y238 1755 aa1.57□□□□□ -2.16
HMGB1P51-201ENST00000605166 LAMA4Q16363 1823 aa1.57□□□□□ -2.16
HMGB1P51-201ENST00000605166 FAM92AA1XBS5 289 aa1.57□□□□□ -2.16
HMGB1P51-201ENST00000605166 IFI27L1Q96BM0 104 aa1.57□□□□□ -2.16
HMGB1P51-201ENST00000605166 BLMP54132 1417 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P51-201ENST00000605166 KIF13AQ9H1H9 1805 aa1.56□□□□□ -2.16
HMGB1P51-201ENST00000605166 RREB1Q92766 1687 aa1.56□□□□□ -2.16
HMGB1P51-201ENST00000605166 IL5P05113 134 aa1.56□□□□□ -2.16
HMGB1P51-201ENST00000605166 SLC48A1Q6P1K1 146 aa1.56□□□□□ -2.16
HMGB1P51-201ENST00000605166 TSKUQ8WUA8 353 aa1.56□□□□□ -2.16
HMGB1P51-201ENST00000605166 TMEM141Q96I45 108 aa1.56□□□□□ -2.16
HMGB1P51-201ENST00000605166 K7EIL1 84 aa1.55□□□□□ -2.16
HMGB1P51-201ENST00000605166 PIPP12273 146 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P51-201ENST00000605166 ZNF56Q15929 161 aa1.55□□□□□ -2.16
HMGB1P51-201ENST00000605166 SPTSSAQ969W0 71 aa1.55□□□□□ -2.16
HMGB1P51-201ENST00000605166 PDCD10Q9BUL8 212 aa1.55□□□□□ -2.16
HMGB1P51-201ENST00000605166 ROS1P08922 2347 aa1.55□□□□□ -2.16
HMGB1P51-201ENST00000605166 PHLPP1O60346 1717 aa1.54□□□□□ -2.16
HMGB1P51-201ENST00000605166 TCRBV3S1A0A5B6 114 aa1.54□□□□□ -2.16
HMGB1P51-201ENST00000605166 FXYD1O00168 92 aa1.54□□□□□ -2.16
HMGB1P51-201ENST00000605166 NDUFB6O95139 128 aa1.54□□□□□ -2.16
HMGB1P51-201ENST00000605166 APODP05090 189 aa1.54□□□□□ -2.16
HMGB1P51-201ENST00000605166 COPS9Q8WXC6 57 aa1.54□□□□□ -2.16
HMGB1P51-201ENST00000605166 SNRNP25Q9BV90 132 aaKnown RBP1.54□□□□□ -2.16
HMGB1P51-201ENST00000605166 AKAP11Q9UKA4 1901 aa1.54□□□□□ -2.16
HMGB1P51-201ENST00000605166 ZNF142P52746 1687 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P51-201ENST00000605166 KLKP1Q107X0 134 aa1.53□□□□□ -2.16
HMGB1P51-201ENST00000605166 C9orf116Q5BN46 136 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P51-201ENST00000605166 CNTRLQ7Z7A1 2325 aa1.53□□□□□ -2.16
HMGB1P51-201ENST00000605166 PPP1R1CQ8WVI7 109 aa1.53□□□□□ -2.16
HMGB1P51-201ENST00000605166 PLAC4Q8WY50 150 aa1.53□□□□□ -2.16
HMGB1P51-201ENST00000605166 HELZ2Q9BYK8 2649 aaKnown RBP1.53□□□□□ -2.17
HMGB1P51-201ENST00000605166 TRAV12-3A0A0B4J271 114 aa1.52□□□□□ -2.17
HMGB1P51-201ENST00000605166 A0A1B0GV90 55 aa1.52□□□□□ -2.17
HMGB1P51-201ENST00000605166 DLEU1O43261 78 aa1.52□□□□□ -2.17
HMGB1P51-201ENST00000605166 SNCGO76070 127 aa1.52□□□□□ -2.17
HMGB1P51-201ENST00000605166 MEIG1Q5JSS6 88 aa1.52□□□□□ -2.17
HMGB1P51-201ENST00000605166 CYP2G1PQ6ZSU1 146 aa1.52□□□□□ -2.17
HMGB1P51-201ENST00000605166 AFDNP55196 1824 aaKnown RBP1.52□□□□□ -2.17
HMGB1P51-201ENST00000605166 FOCADQ5VW36 1801 aa1.52□□□□□ -2.17
HMGB1P51-201ENST00000605166 ASCC3Q8N3C0 2202 aaKnown RBP1.51□□□□□ -2.17
HMGB1P51-201ENST00000605166 DAPK1P53355 1430 aa1.51□□□□□ -2.17
HMGB1P51-201ENST00000605166 NAIPQ13075 1403 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms