RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 HIST1H2BAQ96A08 127 aa15.34■□□□□ 0.05
SSBP4-209ENST00000601357 MAP1LC3B2A6NCE7 125 aa15.33■□□□□ 0.04
SSBP4-209ENST00000601357 EVI2AP22794 236 aa15.33■□□□□ 0.04
SSBP4-209ENST00000601357 NHLRC2Q8NBF2 726 aa15.33■□□□□ 0.04
SSBP4-209ENST00000601357 MAP1LC3BQ9GZQ8 125 aa15.33■□□□□ 0.04
SSBP4-209ENST00000601357 MSRB1Q9NZV6 116 aa15.33■□□□□ 0.04
SSBP4-209ENST00000601357 FABP5P3A8MUU1 101 aa15.32■□□□□ 0.04
SSBP4-209ENST00000601357 RHOHQ15669 191 aa15.32■□□□□ 0.04
SSBP4-209ENST00000601357 COX8CQ7Z4L0 72 aa15.32■□□□□ 0.04
SSBP4-209ENST00000601357 IGHV3-73A0A0B4J1V6 119 aa15.31■□□□□ 0.04
SSBP4-209ENST00000601357 SMLR1H3BR10 107 aa15.31■□□□□ 0.04
SSBP4-209ENST00000601357 ERVFC1-1P60608 527 aa15.31■□□□□ 0.04
SSBP4-209ENST00000601357 PIK3CD-AS1Q5SR53 167 aa15.31■□□□□ 0.04
SSBP4-209ENST00000601357 PRADC1Q9BSG0 188 aa15.31■□□□□ 0.04
SSBP4-209ENST00000601357 MGST1P10620 155 aaKnown RBP15.3■□□□□ 0.04
SSBP4-209ENST00000601357 CRIP1P50238 77 aa15.3■□□□□ 0.04
SSBP4-209ENST00000601357 ZNF345Q14585 488 aa15.3■□□□□ 0.04
SSBP4-209ENST00000601357 KCNRGQ8N5I3 272 aa15.3■□□□□ 0.04
SSBP4-209ENST00000601357 ZC2HC1AQ96GY0 325 aa15.3■□□□□ 0.04
SSBP4-209ENST00000601357 CRYGDP07320 174 aa15.29■□□□□ 0.04
SSBP4-209ENST00000601357 FHITP49789 147 aa15.29■□□□□ 0.04
SSBP4-209ENST00000601357 C10orf126Q8N4M7 172 aa15.29■□□□□ 0.04
SSBP4-209ENST00000601357 MAPKAPK5-AS1Q8N8E1 139 aa15.29■□□□□ 0.04
SSBP4-209ENST00000601357 PGPEP1Q9NXJ5 209 aa15.29■□□□□ 0.04
SSBP4-209ENST00000601357 IL36BQ9NZH7 164 aa15.29■□□□□ 0.04
SSBP4-209ENST00000601357 ZFP30Q9Y2G7 519 aa15.29■□□□□ 0.04
SSBP4-209ENST00000601357 IGHV3-38A0A0C4DH36 116 aa15.28■□□□□ 0.04
SSBP4-209ENST00000601357 ASIPP42127 132 aa15.28■□□□□ 0.04
SSBP4-209ENST00000601357 DNLZQ5SXM8 178 aa15.28■□□□□ 0.04
SSBP4-209ENST00000601357 ZFP2Q6ZN57 461 aa15.28■□□□□ 0.04
SSBP4-209ENST00000601357 Q6ZSN1 163 aa15.28■□□□□ 0.04
SSBP4-209ENST00000601357 FMC1Q96HJ9 113 aa15.28■□□□□ 0.04
SSBP4-209ENST00000601357 TCEAL7Q9BRU2 100 aa15.28■□□□□ 0.04
SSBP4-209ENST00000601357 PARLQ9H300 379 aa15.28■□□□□ 0.04
SSBP4-209ENST00000601357 A0A087WTM6 91 aa15.27■□□□□ 0.04
SSBP4-209ENST00000601357 TRBV6-1A0A0K0K1D8 114 aa15.27■□□□□ 0.04
SSBP4-209ENST00000601357 S100A4P26447 101 aaKnown RBP15.27■□□□□ 0.04
SSBP4-209ENST00000601357 LINC01556Q5JQF7 62 aa15.27■□□□□ 0.04
SSBP4-209ENST00000601357 A8MWV9 139 aa15.26■□□□□ 0.03
SSBP4-209ENST00000601357 B4DEV8 164 aa15.26■□□□□ 0.03
SSBP4-209ENST00000601357 KRBOX1C9JBD0 128 aa15.26■□□□□ 0.03
SSBP4-209ENST00000601357 EREGO14944 169 aa15.26■□□□□ 0.03
SSBP4-209ENST00000601357 UFSP1Q6NVU6 142 aa15.26■□□□□ 0.03
SSBP4-209ENST00000601357 CDPF1Q6NVV7 123 aa15.26■□□□□ 0.03
SSBP4-209ENST00000601357 OR11H4Q8NGC9 324 aa15.26■□□□□ 0.03
SSBP4-209ENST00000601357 STOML3Q8TAV4 291 aa15.26■□□□□ 0.03
SSBP4-209ENST00000601357 HMSDA8MTL9 139 aa15.25■□□□□ 0.03
SSBP4-209ENST00000601357 SH2D1AO60880 128 aa15.25■□□□□ 0.03
SSBP4-209ENST00000601357 LTAP01374 205 aa15.25■□□□□ 0.03
SSBP4-209ENST00000601357 SEC11BP0C7V7 166 aa15.25■□□□□ 0.03
SSBP4-209ENST00000601357 BOLA1Q9Y3E2 137 aa15.25■□□□□ 0.03
SSBP4-209ENST00000601357 LINC00694P0DN24 101 aa15.24■□□□□ 0.03
SSBP4-209ENST00000601357 FUSP35637 526 aaKnown RBP eCLIP15.24■□□□□ 0.032e-6■■■□□ 17
SSBP4-209ENST00000601357 FAM162BQ5T6X4 162 aa15.24■□□□□ 0.03
SSBP4-209ENST00000601357 LELP1Q5T871 98 aa15.24■□□□□ 0.03
SSBP4-209ENST00000601357 Q8N1X5 172 aa15.24■□□□□ 0.03
SSBP4-209ENST00000601357 GTSF1LQ9H1H1 148 aa15.24■□□□□ 0.03
SSBP4-209ENST00000601357 TRAV8-6A0A0B4J262 113 aa15.23■□□□□ 0.03
SSBP4-209ENST00000601357 H3BVH4 76 aa15.23■□□□□ 0.03
SSBP4-209ENST00000601357 UBE2G1P62253 170 aa15.23■□□□□ 0.03
SSBP4-209ENST00000601357 ZNF674Q2M3X9 581 aa15.23■□□□□ 0.03
SSBP4-209ENST00000601357 LGALSLQ3ZCW2 172 aaPredicted RBP15.23■□□□□ 0.03
SSBP4-209ENST00000601357 CST9LP1Q5W188 147 aa15.23■□□□□ 0.03
SSBP4-209ENST00000601357 ATP6V0E2Q8NHE4 81 aa15.23■□□□□ 0.03
SSBP4-209ENST00000601357 MBD3L1Q8WWY6 194 aa15.23■□□□□ 0.03
SSBP4-209ENST00000601357 JPT2Q9H910 190 aa15.23■□□□□ 0.03
SSBP4-209ENST00000601357 IBA57-AS1B1ANH7 110 aa15.22■□□□□ 0.03
SSBP4-209ENST00000601357 UMAD1C9J7I0 102 aa15.22■□□□□ 0.03
SSBP4-209ENST00000601357 M0R036 132 aa15.22■□□□□ 0.03
SSBP4-209ENST00000601357 ARMS2P0C7Q2 107 aa15.22■□□□□ 0.03
SSBP4-209ENST00000601357 OR10J3Q5JRS4 329 aa15.22■□□□□ 0.03
SSBP4-209ENST00000601357 DMRTA1Q5VZB9 504 aa15.22■□□□□ 0.03
SSBP4-209ENST00000601357 SAMD10Q9BYL1 202 aa15.22■□□□□ 0.03
SSBP4-209ENST00000601357 SCRT2Q9NQ03 307 aa15.22■□□□□ 0.03
SSBP4-209ENST00000601357 A0A0D9SG52 128 aa15.21■□□□□ 0.03
SSBP4-209ENST00000601357 PAGE4O60829 102 aa15.21■□□□□ 0.03
SSBP4-209ENST00000601357 LINC01559Q495D7 138 aa15.21■□□□□ 0.03
SSBP4-209ENST00000601357 Q9UF83 564 aa15.21■□□□□ 0.03
SSBP4-209ENST00000601357 GRIFINA4D1Z8 144 aa15.2■□□□□ 0.02
SSBP4-209ENST00000601357 BCL2L11O43521 198 aa15.2■□□□□ 0.02
SSBP4-209ENST00000601357 FAM213BQ8TBF2 198 aa15.2■□□□□ 0.02
SSBP4-209ENST00000601357 SFT2D1Q8WV19 159 aa15.2■□□□□ 0.02
SSBP4-209ENST00000601357 SYT8Q8NBV8 401 aa15.19■□□□□ 0.02
SSBP4-209ENST00000601357 ZNF471Q9BX82 626 aaPredicted RBP15.19■□□□□ 0.02
SSBP4-209ENST00000601357 LRCOL1A6NCL2 159 aa15.18■□□□□ 0.02
SSBP4-209ENST00000601357 AKR1C3P42330 323 aa15.18■□□□□ 0.02
SSBP4-209ENST00000601357 C14orf178Q8N769 122 aaPredicted RBP15.18■□□□□ 0.02
SSBP4-209ENST00000601357 KANTRA0A1W2PQU2 76 aa15.17■□□□□ 0.02
SSBP4-209ENST00000601357 GAGE12JA6NER3 117 aa15.17■□□□□ 0.02
SSBP4-209ENST00000601357 RHODO00212 210 aa15.17■□□□□ 0.02
SSBP4-209ENST00000601357 GAGE1Q13065 139 aa15.17■□□□□ 0.02
SSBP4-209ENST00000601357 GAGE4Q13068 117 aa15.17■□□□□ 0.02
SSBP4-209ENST00000601357 GAGE5Q13069 117 aa15.17■□□□□ 0.02
SSBP4-209ENST00000601357 GAGE13Q4V321 117 aa15.17■□□□□ 0.02
SSBP4-209ENST00000601357 SFRP2Q96HF1 295 aa15.17■□□□□ 0.02
SSBP4-209ENST00000601357 IGHV3-30P01768 117 aa15.16■□□□□ 0.02
SSBP4-209ENST00000601357 IGHV3-33P01772 117 aa15.16■□□□□ 0.02
SSBP4-209ENST00000601357 IGHV3-30-3P0DP02 117 aa15.16■□□□□ 0.02
SSBP4-209ENST00000601357 IGHV3-30-5P0DP03 117 aa15.16■□□□□ 0.02
SSBP4-209ENST00000601357 PHLDA3Q9Y5J5 127 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms