RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TWIST1Q15672 202 aa16.4■□□□□ 0.22
IRF3-228ENST00000601291 KPRPQ5T749 579 aaPredicted RBP16.4■□□□□ 0.22
IRF3-228ENST00000601291 ZNF705AQ6ZN79 300 aaPredicted RBP16.4■□□□□ 0.22
IRF3-228ENST00000601291 GNB1LQ9BYB4 327 aa16.4■□□□□ 0.22
IRF3-228ENST00000601291 SNURFLB1AK76 121 aa16.39■□□□□ 0.21
IRF3-228ENST00000601291 MT-ND6P03923 174 aa16.39■□□□□ 0.21
IRF3-228ENST00000601291 FRMD6-AS1P0C7T7 363 aa16.39■□□□□ 0.21
IRF3-228ENST00000601291 NTF3P20783 257 aa16.39■□□□□ 0.21
IRF3-228ENST00000601291 C9orf85Q96MD7 179 aa16.39■□□□□ 0.21
IRF3-228ENST00000601291 IGHV4-4A0A075B6R2 117 aa16.38■□□□□ 0.21
IRF3-228ENST00000601291 HLA-DQA1P01909 254 aa16.38■□□□□ 0.21
IRF3-228ENST00000601291 ZFP82Q8N141 532 aa16.38■□□□□ 0.21
IRF3-228ENST00000601291 TRAPPC1Q9Y5R8 145 aa16.38■□□□□ 0.21
IRF3-228ENST00000601291 M0R381 172 aa16.37■□□□□ 0.21
IRF3-228ENST00000601291 TMEM136Q6ZRR5 245 aa16.37■□□□□ 0.21
IRF3-228ENST00000601291 TMEM263Q8WUH6 116 aaKnown RBP16.37■□□□□ 0.21
IRF3-228ENST00000601291 FRZBQ92765 325 aa16.37■□□□□ 0.21
IRF3-228ENST00000601291 CMYA5Q8N3K9 4069 aa16.36■□□□□ 0.21
IRF3-228ENST00000601291 PRM2P04554 102 aa16.36■□□□□ 0.21
IRF3-228ENST00000601291 RRN3P1Q2M238 152 aa16.36■□□□□ 0.21
IRF3-228ENST00000601291 SYT8Q8NBV8 401 aa16.36■□□□□ 0.21
IRF3-228ENST00000601291 C11orf72Q8NBR9 251 aa16.35■□□□□ 0.21
IRF3-228ENST00000601291 C16orf74Q96GX8 76 aa16.35■□□□□ 0.21
IRF3-228ENST00000601291 GSN-AS1Q9NRJ2 163 aa16.35■□□□□ 0.21
IRF3-228ENST00000601291 NXPH4O95158 308 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 AZU1P20160 251 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 DEFB135Q30KP9 77 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 ZNF493Q6ZR52 646 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 SMIM15Q7Z3B0 74 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 GATD1Q8NB37 220 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 RNASE8Q8TDE3 154 aaKnown RBP16.34■□□□□ 0.21
IRF3-228ENST00000601291 RCHY1Q96PM5 261 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 SPXQ9BT56 116 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 PKD1L1Q8TDX9 2849 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 SPRY2O43597 315 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 TRGC2P03986 189 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 TRGC1P0CF51 173 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 MRPL18Q9H0U6 180 aaKnown RBP16.34■□□□□ 0.21
IRF3-228ENST00000601291 MSRB1Q9NZV6 116 aa16.34■□□□□ 0.21
IRF3-228ENST00000601291 FABP9Q0Z7S8 132 aa16.33■□□□□ 0.2
IRF3-228ENST00000601291 Q6ZWC4 215 aa16.33■□□□□ 0.2
IRF3-228ENST00000601291 SMIM9A6NGZ8 99 aa16.32■□□□□ 0.2
IRF3-228ENST00000601291 C1orf196B1AJZ1 125 aa16.32■□□□□ 0.2
IRF3-228ENST00000601291 TMEM191AQ9H0A3 160 aa16.32■□□□□ 0.2
IRF3-228ENST00000601291 M0R2P5 195 aa16.31■□□□□ 0.2
IRF3-228ENST00000601291 APCSP02743 223 aa16.31■□□□□ 0.2
IRF3-228ENST00000601291 DMRTA1Q5VZB9 504 aa16.31■□□□□ 0.2
IRF3-228ENST00000601291 AP1S3Q96PC3 154 aa16.31■□□□□ 0.2
IRF3-228ENST00000601291 ZNF876PQ49A33 203 aa16.3■□□□□ 0.2
IRF3-228ENST00000601291 PRB2P02812 416 aaPredicted RBP16.3■□□□□ 0.2
IRF3-228ENST00000601291 IL17DQ8TAD2 202 aa16.3■□□□□ 0.2
IRF3-228ENST00000601291 RNF183Q96D59 192 aa16.3■□□□□ 0.2
IRF3-228ENST00000601291 X6R8D5 127 aa16.3■□□□□ 0.2
IRF3-228ENST00000601291 SLAQ13239 276 aa16.29■□□□□ 0.2
IRF3-228ENST00000601291 PTH2Q96A98 100 aa16.29■□□□□ 0.2
IRF3-228ENST00000601291 RAB5BP61020 215 aa16.28■□□□□ 0.2
IRF3-228ENST00000601291 PIK3CD-AS1Q5SR53 167 aa16.28■□□□□ 0.2
IRF3-228ENST00000601291 OR11H2Q8NH07 326 aa16.28■□□□□ 0.2
IRF3-228ENST00000601291 K7EIL1 84 aa16.27■□□□□ 0.2
IRF3-228ENST00000601291 EVI2AP22794 236 aa16.27■□□□□ 0.2
IRF3-228ENST00000601291 FAM104BQ5XKR9 115 aa16.27■□□□□ 0.2
IRF3-228ENST00000601291 SMIM17P0DL12 118 aa16.26■□□□□ 0.19
IRF3-228ENST00000601291 DAZ2Q13117 558 aaKnown RBP16.26■□□□□ 0.19
IRF3-228ENST00000601291 AMN1Q8IY45 258 aa16.26■□□□□ 0.19
IRF3-228ENST00000601291 NDUFAF3Q9BU61 184 aa16.26■□□□□ 0.19
IRF3-228ENST00000601291 DPH3P1Q9H4G8 78 aa16.26■□□□□ 0.19
IRF3-228ENST00000601291 PHOX2AO14813 284 aa16.26■□□□□ 0.19
IRF3-228ENST00000601291 TP53TG1Q9Y2A0 90 aa16.26■□□□□ 0.19
IRF3-228ENST00000601291 TMA7Q9Y2S6 64 aaKnown RBP16.26■□□□□ 0.19
IRF3-228ENST00000601291 PLAC8L1A1L4L8 177 aa16.25■□□□□ 0.19
IRF3-228ENST00000601291 C14orf178Q8N769 122 aaPredicted RBP16.25■□□□□ 0.19
IRF3-228ENST00000601291 MRPL16Q9NX20 251 aaKnown RBP16.25■□□□□ 0.19
IRF3-228ENST00000601291 MIFP14174 115 aa16.24■□□□□ 0.19
IRF3-228ENST00000601291 LGALS9BQ3B8N2 356 aa16.24■□□□□ 0.19
IRF3-228ENST00000601291 KIAA1644Q3SXP7 199 aa16.24■□□□□ 0.19
IRF3-228ENST00000601291 DEFB121Q5J5C9 76 aa16.24■□□□□ 0.19
IRF3-228ENST00000601291 NOP10Q9NPE3 64 aaKnown RBP16.24■□□□□ 0.19
IRF3-228ENST00000601291 TRGV1A0A0A0MS02 117 aa16.23■□□□□ 0.19
IRF3-228ENST00000601291 RASL10AQ92737 203 aa16.23■□□□□ 0.19
IRF3-228ENST00000601291 A8MWV9 139 aa16.22■□□□□ 0.19
IRF3-228ENST00000601291 OVOL2Q9BRP0 275 aa16.22■□□□□ 0.19
IRF3-228ENST00000601291 MUC4Q99102 2169 aa16.22■□□□□ 0.19
IRF3-228ENST00000601291 RAB4AP20338 218 aa16.21■□□□□ 0.19
IRF3-228ENST00000601291 EMP1P54849 157 aa16.21■□□□□ 0.19
IRF3-228ENST00000601291 JPT2Q9H910 190 aa16.21■□□□□ 0.19
IRF3-228ENST00000601291 MGPP08493 103 aa16.21■□□□□ 0.18
IRF3-228ENST00000601291 MRPL51Q4U2R6 128 aaKnown RBP16.21■□□□□ 0.18
IRF3-228ENST00000601291 RNF185Q96GF1 192 aa16.21■□□□□ 0.18
IRF3-228ENST00000601291 A0A087WWL8 130 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 HIST1H2BKO60814 126 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 HIST1H2BJP06899 126 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 HIST1H2BOP23527 126 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 SRIP30626 198 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 HIST1H2BBP33778 126 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 HIST1H2BDP58876 126 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 HIST1H2BCP62807 126 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 HIST2H2BEQ16778 126 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.2■□□□□ 0.18
IRF3-228ENST00000601291 FAM74A4Q5TZK3 123 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 HIST1H2BHQ93079 126 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms