RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 FAM213BQ8TBF2 198 aa8.25□□□□□ -1.09
LIG1-217ENST00000599165 ZNF471Q9BX82 626 aaPredicted RBP8.25□□□□□ -1.09
LIG1-217ENST00000599165 NKX6-2Q9C056 277 aaPredicted RBP8.25□□□□□ -1.09
LIG1-217ENST00000599165 IGHV3-73A0A0B4J1V6 119 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 A0A1B0GV50 99 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 FABP5P3A8MUU1 101 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 KRBOX1C9JBD0 128 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 SH2D1AO60880 128 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 LTAP01374 205 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 BTF3P20290 206 aaKnown RBP8.24□□□□□ -1.09
LIG1-217ENST00000599165 PPT1P50897 306 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 KRTAP10-2P60368 255 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 DNLZQ5SXM8 178 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 UFSP1Q6NVU6 142 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 TMUB2Q71RG4 321 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 SFT2D1Q8WV19 159 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 JPT2Q9H910 190 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 Q9UF83 564 aa8.24□□□□□ -1.09
LIG1-217ENST00000599165 UMAD1C9J7I0 102 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 DNAH10OSP0CZ25 163 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 LINC00694P0DN24 101 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 CCL20P78556 96 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 ZNF674Q2M3X9 581 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 LGALSLQ3ZCW2 172 aaPredicted RBP8.23□□□□□ -1.09
LIG1-217ENST00000599165 CST9LP1Q5W188 147 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 STOML3Q8TAV4 291 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 FMC1Q96HJ9 113 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 TCEAL7Q9BRU2 100 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 SAMD10Q9BYL1 202 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 PARLQ9H300 379 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 IL36BQ9NZH7 164 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 ZFP30Q9Y2G7 519 aa8.23□□□□□ -1.09
LIG1-217ENST00000599165 TRBV6-4A0A1B0GX49 114 aa8.22□□□□□ -1.09
LIG1-217ENST00000599165 SCO2A0A1W2PP80 73 aa8.22□□□□□ -1.09
LIG1-217ENST00000599165 KANTRA0A1W2PQU2 76 aa8.22□□□□□ -1.09
LIG1-217ENST00000599165 H3BVH4 76 aa8.22□□□□□ -1.09
LIG1-217ENST00000599165 M0R036 132 aa8.22□□□□□ -1.09
LIG1-217ENST00000599165 TIRAPP58753 221 aa8.22□□□□□ -1.09
LIG1-217ENST00000599165 DMRTA1Q5VZB9 504 aa8.22□□□□□ -1.09
LIG1-217ENST00000599165 NHLRC2Q8NBF2 726 aa8.22□□□□□ -1.09
LIG1-217ENST00000599165 PCNPQ8WW12 178 aaKnown RBP8.22□□□□□ -1.09
LIG1-217ENST00000599165 TXNDC17Q9BRA2 123 aa8.22□□□□□ -1.09
LIG1-217ENST00000599165 SCRT2Q9NQ03 307 aa8.22□□□□□ -1.09
LIG1-217ENST00000599165 GRIFINA4D1Z8 144 aa8.21□□□□□ -1.1
LIG1-217ENST00000599165 C16orf90A8MZG2 172 aa8.21□□□□□ -1.1
LIG1-217ENST00000599165 B4DEV8 164 aa8.21□□□□□ -1.1
LIG1-217ENST00000599165 ASIPP42127 132 aa8.21□□□□□ -1.1
LIG1-217ENST00000599165 LINC01559Q495D7 138 aa8.21□□□□□ -1.1
LIG1-217ENST00000599165 PIK3CD-AS1Q5SR53 167 aa8.21□□□□□ -1.1
LIG1-217ENST00000599165 Q6ZNX1 250 aa8.21□□□□□ -1.1
LIG1-217ENST00000599165 SPATA12Q7Z6I5 190 aa8.21□□□□□ -1.1
LIG1-217ENST00000599165 TCTE3Q8IZS6 198 aa8.21□□□□□ -1.1
LIG1-217ENST00000599165 MLST8Q9BVC4 326 aa8.21□□□□□ -1.1
LIG1-217ENST00000599165 KRTAP4-5Q9BYR2 181 aa8.21□□□□□ -1.1
LIG1-217ENST00000599165 CIDEAO60543 219 aa8.2□□□□□ -1.1
LIG1-217ENST00000599165 H2AFB1P0C5Y9 115 aa8.2□□□□□ -1.1
LIG1-217ENST00000599165 ARMS2P0C7Q2 107 aa8.2□□□□□ -1.1
LIG1-217ENST00000599165 TPT1P13693 172 aaKnown RBP8.2□□□□□ -1.1
LIG1-217ENST00000599165 AKR1C3P42330 323 aa8.2□□□□□ -1.1
LIG1-217ENST00000599165 UBE2G1P62253 170 aa8.2□□□□□ -1.1
LIG1-217ENST00000599165 RHOHQ15669 191 aa8.2□□□□□ -1.1
LIG1-217ENST00000599165 FAM162BQ5T6X4 162 aa8.2□□□□□ -1.1
LIG1-217ENST00000599165 LY96Q9Y6Y9 160 aa8.2□□□□□ -1.1
LIG1-217ENST00000599165 TMSB15BA0A087X1C1 80 aa8.19□□□□□ -1.1
LIG1-217ENST00000599165 MGST1P10620 155 aaKnown RBP8.19□□□□□ -1.1
LIG1-217ENST00000599165 FUSP35637 526 aaKnown RBP eCLIP8.19□□□□□ -1.1
LIG1-217ENST00000599165 RPL19P84098 196 aaKnown RBP8.19□□□□□ -1.1
LIG1-217ENST00000599165 ZFP2Q6ZN57 461 aa8.19□□□□□ -1.1
LIG1-217ENST00000599165 C14orf178Q8N769 122 aaPredicted RBP8.19□□□□□ -1.1
LIG1-217ENST00000599165 TRAV1-1A0A0B4J248 108 aa8.18□□□□□ -1.1
LIG1-217ENST00000599165 A8MWV9 139 aa8.18□□□□□ -1.1
LIG1-217ENST00000599165 PFDN1O60925 122 aa8.18□□□□□ -1.1
LIG1-217ENST00000599165 CRYGDP07320 174 aa8.18□□□□□ -1.1
LIG1-217ENST00000599165 S100A4P26447 101 aaKnown RBP8.18□□□□□ -1.1
LIG1-217ENST00000599165 SH2D6Q7Z4S9 175 aa8.18□□□□□ -1.1
LIG1-217ENST00000599165 Q8N3U1 123 aa8.18□□□□□ -1.1
LIG1-217ENST00000599165 PRADC1Q9BSG0 188 aa8.18□□□□□ -1.1
LIG1-217ENST00000599165 DERL1Q9BUN8 251 aa8.18□□□□□ -1.1
LIG1-217ENST00000599165 EIF5AP63241 154 aaKnown RBP8.17□□□□□ -1.1
LIG1-217ENST00000599165 LINC01556Q5JQF7 62 aa8.17□□□□□ -1.1
LIG1-217ENST00000599165 C11orf52Q96A22 123 aa8.17□□□□□ -1.1
LIG1-217ENST00000599165 SFRP2Q96HF1 295 aa8.17□□□□□ -1.1
LIG1-217ENST00000599165 MSRB1Q9NZV6 116 aa8.17□□□□□ -1.1
LIG1-217ENST00000599165 FAT1Q14517 4588 aa8.17□□□□□ -1.1
LIG1-217ENST00000599165 IGHV3-38A0A0C4DH36 116 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 GAGE12JA6NER3 117 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 CDK2AP2O75956 126 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 IGLV2-8P01709 118 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 C1QBP02746 253 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 SULT1A2P50226 295 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 GAGE1Q13065 139 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 GAGE4Q13068 117 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 GAGE5Q13069 117 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 GAGE13Q4V321 117 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 LELP1Q5T871 98 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 BAGE2Q86Y30 109 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 ATP6V0E2Q8NHE4 81 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 GNG13Q9P2W3 67 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 DNAH8Q96JB1 4490 aa8.16□□□□□ -1.1
LIG1-217ENST00000599165 A0A087WTM6 91 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms