RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 LINC00477Q96M19 166 aa9.62□□□□□ -0.87
SCAF1-203ENST00000598359 Q9H3A6 140 aa9.62□□□□□ -0.87
SCAF1-203ENST00000598359 GSN-AS1Q9NRJ2 163 aa9.62□□□□□ -0.87
SCAF1-203ENST00000598359 PKD1P98161 4303 aa9.62□□□□□ -0.87
SCAF1-203ENST00000598359 A0A0J9YY99 117 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 PRSS29PA6NIE9 313 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 KLLNB2CW77 178 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 PHOX2AO14813 284 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 ZNF324O75467 553 aaPredicted RBP9.61□□□□□ -0.87
SCAF1-203ENST00000598359 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
SCAF1-203ENST00000598359 HOXA5P20719 270 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 C9orf47Q6ZRZ4 202 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 Q6ZTI0 123 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 FAM231DQ6ZW35 169 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 ARL6IP6Q8N6S5 226 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 LINC00612Q8N6U2 182 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 Q8TAT8 98 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 IL36BQ9NZH7 164 aa9.61□□□□□ -0.87
SCAF1-203ENST00000598359 TRAV26-1A0A087WT03 109 aa9.6□□□□□ -0.87
SCAF1-203ENST00000598359 PGPA6NDG6 321 aa9.6□□□□□ -0.87
SCAF1-203ENST00000598359 C5orf52A6NGY3 159 aa9.6□□□□□ -0.87
SCAF1-203ENST00000598359 TCRAP04437 139 aa9.6□□□□□ -0.87
SCAF1-203ENST00000598359 GPX1P07203 203 aa9.6□□□□□ -0.87
SCAF1-203ENST00000598359 FAM3BP58499 235 aaPredicted RBP9.6□□□□□ -0.87
SCAF1-203ENST00000598359 RANP62826 216 aaKnown RBP9.6□□□□□ -0.87
SCAF1-203ENST00000598359 TMEM78Q5T7P6 136 aa9.6□□□□□ -0.87
SCAF1-203ENST00000598359 ZFP82Q8N141 532 aa9.6□□□□□ -0.87
SCAF1-203ENST00000598359 ZFAND2AQ8N6M9 145 aa9.6□□□□□ -0.87
SCAF1-203ENST00000598359 FMC1Q96HJ9 113 aa9.6□□□□□ -0.87
SCAF1-203ENST00000598359 TP53TG3Q9ULZ0 132 aa9.6□□□□□ -0.87
SCAF1-203ENST00000598359 V9GYV3 84 aa9.6□□□□□ -0.87
SCAF1-203ENST00000598359 CRISP2P16562 243 aa9.59□□□□□ -0.87
SCAF1-203ENST00000598359 GNG5P63218 68 aa9.59□□□□□ -0.87
SCAF1-203ENST00000598359 C11orf72Q8NBR9 251 aa9.59□□□□□ -0.87
SCAF1-203ENST00000598359 MLST8Q9BVC4 326 aa9.59□□□□□ -0.87
SCAF1-203ENST00000598359 LINC00588Q9Y4M8 146 aa9.59□□□□□ -0.87
SCAF1-203ENST00000598359 A0A1W2PPQ1 181 aa9.58□□□□□ -0.88
SCAF1-203ENST00000598359 MED14OSP0DP75 135 aa9.58□□□□□ -0.88
SCAF1-203ENST00000598359 UBE2G1P62253 170 aa9.58□□□□□ -0.88
SCAF1-203ENST00000598359 ZNRF2Q8NHG8 242 aa9.58□□□□□ -0.88
SCAF1-203ENST00000598359 ZNF492Q9P255 531 aa9.58□□□□□ -0.88
SCAF1-203ENST00000598359 TRGV1A0A0A0MS02 117 aa9.57□□□□□ -0.88
SCAF1-203ENST00000598359 SERTM2A0A1B0GWG4 89 aa9.57□□□□□ -0.88
SCAF1-203ENST00000598359 LTAP01374 205 aa9.57□□□□□ -0.88
SCAF1-203ENST00000598359 TRGC2P03986 189 aa9.57□□□□□ -0.88
SCAF1-203ENST00000598359 S100A6P06703 90 aa9.57□□□□□ -0.88
SCAF1-203ENST00000598359 ZNF138P52744 262 aa9.57□□□□□ -0.88
SCAF1-203ENST00000598359 ERVFC1-1P60608 527 aa9.57□□□□□ -0.88
SCAF1-203ENST00000598359 DAZ2Q13117 558 aaKnown RBP9.57□□□□□ -0.88
SCAF1-203ENST00000598359 BAGE2Q86Y30 109 aa9.57□□□□□ -0.88
SCAF1-203ENST00000598359 TMEM75Q8N9X5 138 aa9.57□□□□□ -0.88
SCAF1-203ENST00000598359 LINC00479Q96M42 142 aa9.57□□□□□ -0.88
SCAF1-203ENST00000598359 DNAH11Q96DT5 4516 aa9.57□□□□□ -0.88
SCAF1-203ENST00000598359 DYNC1H1Q14204 4646 aaKnown RBP9.57□□□□□ -0.88
SCAF1-203ENST00000598359 TRGV2A0A075B6R0 118 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 CCL18P55774 89 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 ANXA2RQ3ZCQ2 193 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
SCAF1-203ENST00000598359 IBA57Q5T440 356 aaKnown RBP9.56□□□□□ -0.88
SCAF1-203ENST00000598359 C1orf134Q5TEV5 83 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 Q86TA4 180 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 LINC00467Q9BRT7 94 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 RPH3ALQ9UNE2 315 aa9.56□□□□□ -0.88
SCAF1-203ENST00000598359 IGHV1OR15-1A0A075B7D0 117 aa9.55□□□□□ -0.88
SCAF1-203ENST00000598359 TRAV34A0A0B4J273 112 aa9.55□□□□□ -0.88
SCAF1-203ENST00000598359 NBDYA0A0U1RRE5 68 aa9.55□□□□□ -0.88
SCAF1-203ENST00000598359 SMIM27A0A1W2PRY6 76 aa9.55□□□□□ -0.88
SCAF1-203ENST00000598359 IGLV2-11P01706 119 aa9.55□□□□□ -0.88
SCAF1-203ENST00000598359 IGHV3-53P01767 116 aa9.55□□□□□ -0.88
SCAF1-203ENST00000598359 CSN1S1P47710 185 aa9.55□□□□□ -0.88
SCAF1-203ENST00000598359 SNRPEP62304 92 aaKnown RBP9.55□□□□□ -0.88
SCAF1-203ENST00000598359 MUC21Q5SSG8 566 aa9.55□□□□□ -0.88
SCAF1-203ENST00000598359 CMTM2Q8TAZ6 248 aa9.55□□□□□ -0.88
SCAF1-203ENST00000598359 FRZBQ92765 325 aa9.55□□□□□ -0.88
SCAF1-203ENST00000598359 KRTAP4-5Q9BYR2 181 aa9.55□□□□□ -0.88
SCAF1-203ENST00000598359 MRPL16Q9NX20 251 aaKnown RBP9.55□□□□□ -0.88
SCAF1-203ENST00000598359 C19orf71A6NCJ1 209 aa9.54□□□□□ -0.88
SCAF1-203ENST00000598359 FBLL1A6NHQ2 334 aaKnown RBP9.54□□□□□ -0.88
SCAF1-203ENST00000598359 DIRC3C9JPN6 131 aa9.54□□□□□ -0.88
SCAF1-203ENST00000598359 TRGC1P0CF51 173 aa9.54□□□□□ -0.88
SCAF1-203ENST00000598359 MGST1P10620 155 aaKnown RBP9.54□□□□□ -0.88
SCAF1-203ENST00000598359 TCL1AP56279 114 aa9.54□□□□□ -0.88
SCAF1-203ENST00000598359 COX19Q49B96 90 aa9.54□□□□□ -0.88
SCAF1-203ENST00000598359 CT83Q5H943 113 aa9.54□□□□□ -0.88
SCAF1-203ENST00000598359 TMEM183AQ8IXX5 376 aa9.54□□□□□ -0.88
SCAF1-203ENST00000598359 VSIG2Q96IQ7 327 aa9.54□□□□□ -0.88
SCAF1-203ENST00000598359 RNASE7Q9H1E1 156 aaKnown RBP9.54□□□□□ -0.88
SCAF1-203ENST00000598359 K7EQM0 130 aa9.53□□□□□ -0.88
SCAF1-203ENST00000598359 SPINK4O60575 86 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms