RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SYT8Q8NBV8 401 aa12.03□□□□□ -0.48
SHKBP1-212ENST00000596163 PCNPQ8WW12 178 aaKnown RBP12.03□□□□□ -0.48
SHKBP1-212ENST00000596163 SMIM12Q96EX1 92 aa12.03□□□□□ -0.48
SHKBP1-212ENST00000596163 PGPEP1LA6NFU8 196 aa12.02□□□□□ -0.49
SHKBP1-212ENST00000596163 RS1O15537 224 aa12.02□□□□□ -0.49
SHKBP1-212ENST00000596163 GNG4P50150 75 aa12.02□□□□□ -0.49
SHKBP1-212ENST00000596163 MRPL23Q16540 153 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-212ENST00000596163 ZNF506Q5JVG8 444 aa12.02□□□□□ -0.49
SHKBP1-212ENST00000596163 BIN3Q9NQY0 253 aa12.02□□□□□ -0.49
SHKBP1-212ENST00000596163 HYDINQ4G0P3 5121 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 TMSB15BA0A087X1C1 80 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 A0A096LPF7 62 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 GRIFINA4D1Z8 144 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 A8MWV9 139 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 ARMS2P0C7Q2 107 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 CENPWQ5EE01 88 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 CFAP126Q5VTH2 177 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 PRR27Q6MZM9 219 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 LYPD6BQ8NI32 183 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 DAZAP1Q96EP5 407 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 DERL1Q9BUN8 251 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 LINC00588Q9Y4M8 146 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 PHLDA3Q9Y5J5 127 aa12.01□□□□□ -0.49
SHKBP1-212ENST00000596163 RBFOX3A6NFN3 312 aa12□□□□□ -0.49
SHKBP1-212ENST00000596163 H3BVH4 76 aa12□□□□□ -0.49
SHKBP1-212ENST00000596163 CXCL1P09341 107 aa12□□□□□ -0.49
SHKBP1-212ENST00000596163 MUC4Q99102 2169 aa11.99□□□□□ -0.49
SHKBP1-212ENST00000596163 RAB19A4D1S5 217 aa11.99□□□□□ -0.49
SHKBP1-212ENST00000596163 MGST1P10620 155 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-212ENST00000596163 ESRGQ1W209 222 aa11.99□□□□□ -0.49
SHKBP1-212ENST00000596163 IGLV2-18A0A075B6J9 118 aa11.98□□□□□ -0.49
SHKBP1-212ENST00000596163 MED14OSP0DP75 135 aa11.98□□□□□ -0.49
SHKBP1-212ENST00000596163 GYPEP15421 78 aa11.98□□□□□ -0.49
SHKBP1-212ENST00000596163 GATA1P15976 413 aaPredicted RBP11.98□□□□□ -0.49
SHKBP1-212ENST00000596163 SRIP30626 198 aa11.98□□□□□ -0.49
SHKBP1-212ENST00000596163 ZFP2Q6ZN57 461 aa11.98□□□□□ -0.49
SHKBP1-212ENST00000596163 SH2D6Q7Z4S9 175 aa11.98□□□□□ -0.49
SHKBP1-212ENST00000596163 PRADC1Q9BSG0 188 aa11.98□□□□□ -0.49
SHKBP1-212ENST00000596163 SCRT2Q9NQ03 307 aa11.98□□□□□ -0.49
SHKBP1-212ENST00000596163 TRBV6-4A0A1B0GX49 114 aa11.97□□□□□ -0.49
SHKBP1-212ENST00000596163 TMEM250H0YL14 139 aa11.97□□□□□ -0.49
SHKBP1-212ENST00000596163 M0R2N4 97 aa11.97□□□□□ -0.49
SHKBP1-212ENST00000596163 NEGR1Q7Z3B1 354 aa11.97□□□□□ -0.49
SHKBP1-212ENST00000596163 ZFP82Q8N141 532 aa11.97□□□□□ -0.49
SHKBP1-212ENST00000596163 ZNRF2Q8NHG8 242 aa11.97□□□□□ -0.49
SHKBP1-212ENST00000596163 UPK3BQ9BT76 320 aa11.97□□□□□ -0.49
SHKBP1-212ENST00000596163 EIF5A2Q9GZV4 153 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-212ENST00000596163 MRPS16Q9Y3D3 137 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-212ENST00000596163 KMT2AQ03164 3969 aa11.96□□□□□ -0.49
SHKBP1-212ENST00000596163 K7EQD1 137 aa11.96□□□□□ -0.49
SHKBP1-212ENST00000596163 NDUFS6O75380 124 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-212ENST00000596163 RPS20P60866 119 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-212ENST00000596163 RHOHQ15669 191 aa11.96□□□□□ -0.49
SHKBP1-212ENST00000596163 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.49
SHKBP1-212ENST00000596163 Q9H8V8 135 aa11.96□□□□□ -0.49
SHKBP1-212ENST00000596163 IGHV3-73A0A0B4J1V6 119 aa11.95□□□□□ -0.5
SHKBP1-212ENST00000596163 XKRY2A2RUG3 117 aa11.95□□□□□ -0.5
SHKBP1-212ENST00000596163 RHODO00212 210 aa11.95□□□□□ -0.5
SHKBP1-212ENST00000596163 IGLV2-8P01709 118 aa11.95□□□□□ -0.5
SHKBP1-212ENST00000596163 RPL19P84098 196 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-212ENST00000596163 TEX261Q6UWH6 196 aa11.95□□□□□ -0.5
SHKBP1-212ENST00000596163 ZNF575Q86XF7 245 aa11.95□□□□□ -0.5
SHKBP1-212ENST00000596163 PARLQ9H300 379 aa11.95□□□□□ -0.5
SHKBP1-212ENST00000596163 DNAH6Q9C0G6 4158 aa11.95□□□□□ -0.5
SHKBP1-212ENST00000596163 M0R381 172 aa11.94□□□□□ -0.5
SHKBP1-212ENST00000596163 P01737 135 aa11.94□□□□□ -0.5
SHKBP1-212ENST00000596163 TOR2AQ5JU69 321 aa11.94□□□□□ -0.5
SHKBP1-212ENST00000596163 SOHLH1Q5JUK2 328 aa11.94□□□□□ -0.5
SHKBP1-212ENST00000596163 LYPD5Q6UWN5 251 aa11.94□□□□□ -0.5
SHKBP1-212ENST00000596163 SLC25A29Q8N8R3 303 aa11.94□□□□□ -0.5
SHKBP1-212ENST00000596163 SFRP2Q96HF1 295 aa11.94□□□□□ -0.5
SHKBP1-212ENST00000596163 FAM210AQ96ND0 272 aa11.94□□□□□ -0.5
SHKBP1-212ENST00000596163 NBDYA0A0U1RRE5 68 aa11.93□□□□□ -0.5
SHKBP1-212ENST00000596163 OR5AL1P0C617 328 aa11.93□□□□□ -0.5
SHKBP1-212ENST00000596163 Q6ZR54 194 aa11.93□□□□□ -0.5
SHKBP1-212ENST00000596163 OR2D3Q8NGH3 330 aa11.93□□□□□ -0.5
SHKBP1-212ENST00000596163 SSBP4Q9BWG4 385 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-212ENST00000596163 TRBV20OR9-2A0A075B6H5 130 aa11.92□□□□□ -0.5
SHKBP1-212ENST00000596163 C19orf71A6NCJ1 209 aa11.92□□□□□ -0.5
SHKBP1-212ENST00000596163 SNAI2O43623 268 aa11.92□□□□□ -0.5
SHKBP1-212ENST00000596163 TTC32Q5I0X7 151 aa11.92□□□□□ -0.5
SHKBP1-212ENST00000596163 SPANXN1Q5VSR9 72 aa11.92□□□□□ -0.5
SHKBP1-212ENST00000596163 LINC00336Q6ZUF6 198 aa11.92□□□□□ -0.5
SHKBP1-212ENST00000596163 CEBPGP53567 150 aa11.91□□□□□ -0.5
SHKBP1-212ENST00000596163 JPT2Q9H910 190 aa11.91□□□□□ -0.5
SHKBP1-212ENST00000596163 C1orf134Q5TEV5 83 aa11.9□□□□□ -0.5
SHKBP1-212ENST00000596163 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
SHKBP1-212ENST00000596163 UFSP1Q6NVU6 142 aa11.9□□□□□ -0.5
SHKBP1-212ENST00000596163 OCC1Q8TAD7 63 aa11.9□□□□□ -0.5
SHKBP1-212ENST00000596163 LOC100131303A0A0U1RQF7 123 aa11.89□□□□□ -0.51
SHKBP1-212ENST00000596163 A0A1W2PPQ1 181 aa11.89□□□□□ -0.51
SHKBP1-212ENST00000596163 SIVA1O15304 175 aa11.89□□□□□ -0.51
SHKBP1-212ENST00000596163 NXPH4O95158 308 aa11.89□□□□□ -0.51
SHKBP1-212ENST00000596163 TIRAPP58753 221 aa11.89□□□□□ -0.51
SHKBP1-212ENST00000596163 FER1L6-AS1Q8NA97 138 aa11.89□□□□□ -0.51
SHKBP1-212ENST00000596163 NUDT10Q8NFP7 164 aa11.89□□□□□ -0.51
SHKBP1-212ENST00000596163 OR10AG1Q8NH19 301 aa11.89□□□□□ -0.51
SHKBP1-212ENST00000596163 NUDT11Q96G61 164 aa11.89□□□□□ -0.51
SHKBP1-212ENST00000596163 SAMD10Q9BYL1 202 aa11.89□□□□□ -0.51
SHKBP1-212ENST00000596163 LY96Q9Y6Y9 160 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms