RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 CRIP1P50238 77 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 LINC01547P58512 204 aaPredicted RBP3.28□□□□□ -1.88
ERCC1-216ENST00000592444 DEFB1P60022 68 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 UBE2G2P60604 165 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 RAB14P61106 215 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 RPL23P62829 140 aaKnown RBP3.28□□□□□ -1.88
ERCC1-216ENST00000592444 TMEM183BQ1AE95 376 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 GDF5OSQ5U4N7 250 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 C9orf47Q6ZRZ4 202 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 RNF182Q8N6D2 247 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 TMEM75Q8N9X5 138 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 HIST1H2BAQ96A08 127 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 ISOC2Q96AB3 205 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 SMIM12Q96EX1 92 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 LINC00479Q96M42 142 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 LINC01600Q96MT4 127 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 SLC50A1Q9BRV3 221 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
ERCC1-216ENST00000592444 MS4A6AQ9H2W1 248 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 EPDR1Q9UM22 224 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 UFC1Q9Y3C8 167 aa3.28□□□□□ -1.88
ERCC1-216ENST00000592444 IGKV2-40A0A087WW87 121 aaPredicted RBP3.27□□□□□ -1.89
ERCC1-216ENST00000592444 A0A087WWC5 75 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 TRBV7-9A0A0J9YWB2 115 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 KLLNB2CW77 178 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 DNASE2O00115 360 aaPredicted RBP3.27□□□□□ -1.89
ERCC1-216ENST00000592444 CRXO43186 299 aaPredicted RBP3.27□□□□□ -1.89
ERCC1-216ENST00000592444 SCGB2A1O75556 95 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 GCGP01275 180 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 IGKV2D-40P01614 121 aaPredicted RBP3.27□□□□□ -1.89
ERCC1-216ENST00000592444 GALR1P47211 349 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 TFPI2P48307 235 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 ZNF80P51504 273 aaPredicted RBP3.27□□□□□ -1.89
ERCC1-216ENST00000592444 FAM106AQ4KMX7 169 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 CENPWQ5EE01 88 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 FAM222AQ5U5X8 452 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 TCF24Q7RTU0 167 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 NFE4Q86UQ8 179 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 OR8I2Q8N0Y5 310 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 OR10G8Q8NGN5 311 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 CIRBP-AS1Q8TBR5 109 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 ODF3Q96PU9 254 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 VGLL1Q99990 258 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 PYGO2Q9BRQ0 406 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 C20orf24Q9BUV8 137 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 CHAC1Q9BUX1 264 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 ZNF492Q9P255 531 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 RNF24Q9Y225 148 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 V9GYV3 84 aa3.27□□□□□ -1.89
ERCC1-216ENST00000592444 TRAV34A0A0B4J273 112 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 A0A0J9YX75 114 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 SERTM2A0A1B0GWG4 89 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 A0A1W2PS18 150 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 HELTA6NFD8 242 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 ZNF705FA8MVS1 300 aaPredicted RBP3.26□□□□□ -1.89
ERCC1-216ENST00000592444 IFNA1P01562 189 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 HLA-DRB4P13762 266 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 S100A1P23297 94 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 TAS2R60P59551 318 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
ERCC1-216ENST00000592444 KRTAP10-8P60410 259 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 RANP62826 216 aaKnown RBP3.26□□□□□ -1.89
ERCC1-216ENST00000592444 PEA15Q15121 130 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 PSG3Q16557 428 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 ZNF674Q2M3X9 581 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 FAM74A3Q4VXF1 159 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 Q6ZQT7 251 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 FAM231DQ6ZW35 169 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 TMEM183AQ8IXX5 376 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 CSNK1G2-AS1Q8NCQ2 148 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 CLRN3Q8NCR9 226 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 OCC1Q8TAD7 63 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 Q8TAT8 98 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 BLNKQ8WV28 456 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 ZC2HC1AQ96GY0 325 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 NEU1Q99519 415 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 SMIM7Q9BQ49 75 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 UPK3BQ9BT76 320 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 AGPAT4-IT1Q9H0P7 198 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 PRELID1Q9Y255 219 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 LENEPQ9Y5L5 61 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 HLA-DRB4X5D2U9 266 aa3.26□□□□□ -1.89
ERCC1-216ENST00000592444 C7orf77A4D0Y5 90 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 PGPA6NDG6 321 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 F6UB75 175 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 SCO1O75880 301 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 NXPH4O95158 308 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 PFN1P07737 140 aaKnown RBP3.25□□□□□ -1.89
ERCC1-216ENST00000592444 IGLC6P0CF74 106 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 CT45A10P0DMU9 189 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 CMC4P56277 68 aaPredicted RBP3.25□□□□□ -1.89
ERCC1-216ENST00000592444 PSG9Q00887 426 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 FLI1Q01543 452 aaPredicted RBP3.25□□□□□ -1.89
ERCC1-216ENST00000592444 PNRC1Q12796 327 aaPredicted RBP3.25□□□□□ -1.89
ERCC1-216ENST00000592444 RHEBQ15382 184 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 CT83Q5H943 113 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 SAMD13Q5VXD3 122 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 CST9LP1Q5W188 147 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 Q6AWC8 147 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms