RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	KCNS1	Q96KK3	526 aa		12.02	□□□□□ -0.49
CIRBP-238	ENST00000592412	C9orf85	Q96MD7	179 aa		12.02	□□□□□ -0.49
CIRBP-238	ENST00000592412	LINC00694	P0DN24	101 aa		12.01	□□□□□ -0.49
CIRBP-238	ENST00000592412	SERTAD4-AS1	Q5TG53	156 aa		12.01	□□□□□ -0.49
CIRBP-238	ENST00000592412	DAZ4	Q86SG3	579 aa	Known RBP	12.01	□□□□□ -0.49
CIRBP-238	ENST00000592412	INO80E	Q8NBZ0	244 aa	Predicted RBP	12.01	□□□□□ -0.49
CIRBP-238	ENST00000592412	CMTM2	Q8TAZ6	248 aa		12.01	□□□□□ -0.49
CIRBP-238	ENST00000592412	DAZ3	Q9NR90	486 aa	Known RBP	12.01	□□□□□ -0.49
CIRBP-238	ENST00000592412	PGPEP1L	A6NFU8	196 aa		12	□□□□□ -0.49
CIRBP-238	ENST00000592412	CIDEA	O60543	219 aa		12	□□□□□ -0.49
CIRBP-238	ENST00000592412	TAS2R45	P59539	299 aa		12	□□□□□ -0.49
CIRBP-238	ENST00000592412	ZNF506	Q5JVG8	444 aa		12	□□□□□ -0.49
CIRBP-238	ENST00000592412	ARL6IP6	Q8N6S5	226 aa		12	□□□□□ -0.49
CIRBP-238	ENST00000592412	TMEM75	Q8N9X5	138 aa		12	□□□□□ -0.49
CIRBP-238	ENST00000592412	SGK494	Q96LW2	274 aa		12	□□□□□ -0.49
CIRBP-238	ENST00000592412		Q9UF83	564 aa		12	□□□□□ -0.49
CIRBP-238	ENST00000592412	BAALC	Q8WXS3	180 aa		11.99	□□□□□ -0.49
CIRBP-238	ENST00000592412		G3V3Q6	166 aa		11.98	□□□□□ -0.49
CIRBP-238	ENST00000592412	MGST1	P10620	155 aa	Known RBP	11.98	□□□□□ -0.49
CIRBP-238	ENST00000592412	RNASE3	P12724	160 aa	Known RBP	11.98	□□□□□ -0.49
CIRBP-238	ENST00000592412	DNAJC30	Q96LL9	226 aa		11.98	□□□□□ -0.49
CIRBP-238	ENST00000592412	TNFSF18	Q9UNG2	199 aa		11.98	□□□□□ -0.49
CIRBP-238	ENST00000592412	TRAV8-3	A0A0A6YYJ7	113 aa		11.97	□□□□□ -0.49
CIRBP-238	ENST00000592412	RNF222	A6NCQ9	220 aa		11.97	□□□□□ -0.49
CIRBP-238	ENST00000592412	FAM74A1	Q5RGS3	127 aa		11.97	□□□□□ -0.49
CIRBP-238	ENST00000592412	PTH2	Q96A98	100 aa		11.97	□□□□□ -0.49
CIRBP-238	ENST00000592412	CHAC1	Q9BUX1	264 aa		11.97	□□□□□ -0.49
CIRBP-238	ENST00000592412	SMLR1	H3BR10	107 aa		11.96	□□□□□ -0.49
CIRBP-238	ENST00000592412	HSD17B11	Q8NBQ5	300 aa		11.96	□□□□□ -0.49
CIRBP-238	ENST00000592412	CIRBP-AS1	Q8TBR5	109 aa		11.96	□□□□□ -0.49
CIRBP-238	ENST00000592412	GAGE12J	A6NER3	117 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	HMGB3	O15347	200 aa	Known RBP	11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	ARPC5	O15511	151 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	OXT	P01178	125 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	IGLV2-11	P01706	119 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	RAB2A	P61019	212 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	GAGE1	Q13065	139 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	GAGE4	Q13068	117 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	GAGE5	Q13069	117 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	GAGE13	Q4V321	117 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	PQLC2	Q6ZP29	291 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	SYT8	Q8NBV8	401 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	PARL	Q9H300	379 aa		11.95	□□□□□ -0.5
CIRBP-238	ENST00000592412	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.94	□□□□□ -0.5
CIRBP-238	ENST00000592412	GCG	P01275	180 aa		11.94	□□□□□ -0.5
CIRBP-238	ENST00000592412	TAAR5	O14804	337 aa		11.93	□□□□□ -0.5
CIRBP-238	ENST00000592412	ATP6V0C	P27449	155 aa		11.93	□□□□□ -0.5
CIRBP-238	ENST00000592412	UFSP1	Q6NVU6	142 aa		11.93	□□□□□ -0.5
CIRBP-238	ENST00000592412	LINC00479	Q96M42	142 aa		11.93	□□□□□ -0.5
CIRBP-238	ENST00000592412	PSMG3	Q9BT73	122 aa	Predicted RBP	11.93	□□□□□ -0.5
CIRBP-238	ENST00000592412	SAMD10	Q9BYL1	202 aa		11.93	□□□□□ -0.5
CIRBP-238	ENST00000592412		A0A1W2PPV4	95 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	RBFOX3	A6NFN3	312 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	GGTLC3	B5MD39	225 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	TCRA	P04437	139 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	TOR2A	Q5JU69	321 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	RPL7L1	Q6DKI1	246 aa	Known RBP	11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	ZFP2	Q6ZN57	461 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	C14orf178	Q8N769	122 aa	Predicted RBP	11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	OR10G9	Q8NGN4	311 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	OR10G7	Q8NGN6	311 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	OR2G3	Q8NGZ4	309 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	NDFIP1	Q9BT67	221 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	JPT2	Q9H910	190 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	PSG8	Q9UQ74	426 aa		11.92	□□□□□ -0.5
CIRBP-238	ENST00000592412	ARL14EPL	P0DKL9	152 aa		11.91	□□□□□ -0.5
CIRBP-238	ENST00000592412	CYB561D1	Q8N8Q1	229 aa		11.91	□□□□□ -0.5
CIRBP-238	ENST00000592412		Q8N976	141 aa		11.91	□□□□□ -0.5
CIRBP-238	ENST00000592412	PLA2G2D	Q9UNK4	145 aa		11.91	□□□□□ -0.5
CIRBP-238	ENST00000592412	COX11	Q9Y6N1	276 aa		11.91	□□□□□ -0.5
CIRBP-238	ENST00000592412	IGKV3D-20	A0A0C4DH25	116 aa		11.9	□□□□□ -0.5
CIRBP-238	ENST00000592412	SERTM2	A0A1B0GWG4	89 aa		11.9	□□□□□ -0.5
CIRBP-238	ENST00000592412		Q6ZNX1	250 aa		11.9	□□□□□ -0.5
CIRBP-238	ENST00000592412	NIT1	Q86X76	327 aa		11.9	□□□□□ -0.5
CIRBP-238	ENST00000592412	C5orf17	Q8NAS9	161 aa		11.9	□□□□□ -0.5
CIRBP-238	ENST00000592412	SUN5	Q8TC36	379 aa		11.9	□□□□□ -0.5
CIRBP-238	ENST00000592412	SH3BGRL3	Q9H299	93 aa		11.9	□□□□□ -0.5
CIRBP-238	ENST00000592412	IGKV2D-24	A0A075B6R9	120 aa		11.89	□□□□□ -0.51
CIRBP-238	ENST00000592412	HNRNPA3	P51991	378 aa	Known RBP	11.89	□□□□□ -0.51
CIRBP-238	ENST00000592412	SERF2	P84101	59 aa		11.89	□□□□□ -0.51
CIRBP-238	ENST00000592412		A0A087WWC5	75 aa		11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	HMSD	A8MTL9	139 aa		11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412		A8MWV9	139 aa		11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	IGLV2-8	P01709	118 aa		11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	MB	P02144	154 aa		11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	STAG3L2	P0CL84	134 aa		11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	STAG3L3	P0CL85	134 aa		11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	CDC34	P49427	236 aa	Predicted RBP	11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	FLI1	Q01543	452 aa	Predicted RBP	11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	SMUG1	Q53HV7	270 aa		11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	PIK3CD-AS1	Q5SR53	167 aa		11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	OR11H4	Q8NGC9	324 aa		11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	KLK12	Q9UKR0	248 aa		11.88	□□□□□ -0.51
CIRBP-238	ENST00000592412	ZNF345	Q14585	488 aa		11.87	□□□□□ -0.51
CIRBP-238	ENST00000592412	ATRAID	Q6UW56	229 aa		11.87	□□□□□ -0.51
CIRBP-238	ENST00000592412	PRNT	Q86SH4	94 aa		11.87	□□□□□ -0.51
CIRBP-238	ENST00000592412	KCNRG	Q8N5I3	272 aa		11.87	□□□□□ -0.51
CIRBP-238	ENST00000592412	RMI2	Q96E14	147 aa		11.87	□□□□□ -0.51
CIRBP-238	ENST00000592412	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 627.8 ms