RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 BLCAPP62952 87 aa10.42□□□□□ -0.74
SMARCA4-216ENST00000591545 IGHV3-16A0A0C4DH30 117 aa10.42□□□□□ -0.74
SMARCA4-216ENST00000591545 TEX48A0A1B0GUV7 120 aa10.42□□□□□ -0.74
SMARCA4-216ENST00000591545 SPRNQ5BIV9 151 aa10.42□□□□□ -0.74
SMARCA4-216ENST00000591545 DEFB125Q8N687 156 aa10.42□□□□□ -0.74
SMARCA4-216ENST00000591545 MED13Q9UHV7 2174 aa10.42□□□□□ -0.74
SMARCA4-216ENST00000591545 TRAV12-2A0A075B6T6 113 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 TRACP01848 142 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 MYCNOSP40205 109 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 Q6ZSR3 168 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 DSCR8Q96T75 97 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 ACYP1P07311 99 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 ANKRD29Q8N6D5 301 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 NPBQ8NG41 125 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 DKK2Q9UBU2 259 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 H3BMG7 143 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 CFC1BP0CG36 223 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 CFC1P0CG37 223 aa10.41□□□□□ -0.74
SMARCA4-216ENST00000591545 ADAMTS9Q9P2N4 1935 aa10.4□□□□□ -0.74
SMARCA4-216ENST00000591545 PRSS47A8MTI9 375 aa10.4□□□□□ -0.74
SMARCA4-216ENST00000591545 CGB3P0DN86 165 aa10.4□□□□□ -0.74
SMARCA4-216ENST00000591545 HERV-K104P63124 156 aa10.4□□□□□ -0.74
SMARCA4-216ENST00000591545 CITED1Q99966 193 aa10.4□□□□□ -0.74
SMARCA4-216ENST00000591545 SCRT2Q9NQ03 307 aa10.4□□□□□ -0.74
SMARCA4-216ENST00000591545 PRSS29PA6NIE9 313 aa10.4□□□□□ -0.74
SMARCA4-216ENST00000591545 NCOR2Q9Y618 2525 aa10.4□□□□□ -0.74
SMARCA4-216ENST00000591545 SLURP1P55000 103 aa10.4□□□□□ -0.74
SMARCA4-216ENST00000591545 GAGE6Q13070 117 aa10.4□□□□□ -0.74
SMARCA4-216ENST00000591545 PIFOQ8TCI5 191 aa10.4□□□□□ -0.74
SMARCA4-216ENST00000591545 HAMPP81172 84 aa10.4□□□□□ -0.75
SMARCA4-216ENST00000591545 IGHV7-81A0A0B4J1V7 117 aa10.39□□□□□ -0.75
SMARCA4-216ENST00000591545 MUC22E2RYF6 1773 aaPredicted RBP10.39□□□□□ -0.75
SMARCA4-216ENST00000591545 KRTAP27-1Q3LI81 207 aa10.39□□□□□ -0.75
SMARCA4-216ENST00000591545 IGF2BP2-AS1Q96M15 143 aa10.38□□□□□ -0.75
SMARCA4-216ENST00000591545 K7ERJ3 54 aa10.38□□□□□ -0.75
SMARCA4-216ENST00000591545 AGPAT4-IT1Q9H0P7 198 aa10.38□□□□□ -0.75
SMARCA4-216ENST00000591545 PTPRSQ13332 1948 aa10.38□□□□□ -0.75
SMARCA4-216ENST00000591545 EGR2P11161 476 aaPredicted RBP10.38□□□□□ -0.75
SMARCA4-216ENST00000591545 RNF152Q8N8N0 203 aa10.38□□□□□ -0.75
SMARCA4-216ENST00000591545 DYNAPQ8N1N2 210 aa10.38□□□□□ -0.75
SMARCA4-216ENST00000591545 DNAH12Q6ZR08 3092 aa10.38□□□□□ -0.75
SMARCA4-216ENST00000591545 ZFP36P26651 326 aaKnown RBP10.37□□□□□ -0.75
SMARCA4-216ENST00000591545 NTN5Q8WTR8 489 aaPredicted RBP10.37□□□□□ -0.75
SMARCA4-216ENST00000591545 ATRXP46100 2492 aa10.37□□□□□ -0.75
SMARCA4-216ENST00000591545 IGHV3-38A0A0C4DH36 116 aa10.37□□□□□ -0.75
SMARCA4-216ENST00000591545 C19orf84I3L1E1 186 aa10.37□□□□□ -0.75
SMARCA4-216ENST00000591545 TMEM89A2RUT3 159 aa10.37□□□□□ -0.75
SMARCA4-216ENST00000591545 Q6ZVH6 145 aa10.37□□□□□ -0.75
SMARCA4-216ENST00000591545 C5orf56Q8N8D9 126 aa10.37□□□□□ -0.75
SMARCA4-216ENST00000591545 C15orf53Q8NAA6 179 aa10.37□□□□□ -0.75
SMARCA4-216ENST00000591545 NXPH4O95158 308 aa10.36□□□□□ -0.75
SMARCA4-216ENST00000591545 AJUBAQ96IF1 538 aa10.36□□□□□ -0.75
SMARCA4-216ENST00000591545 CGB7P0DN87 165 aa10.36□□□□□ -0.75
SMARCA4-216ENST00000591545 SLC25A29Q8N8R3 303 aa10.36□□□□□ -0.75
SMARCA4-216ENST00000591545 CFHR4Q92496 578 aa10.36□□□□□ -0.75
SMARCA4-216ENST00000591545 WISP2O76076 250 aa10.36□□□□□ -0.75
SMARCA4-216ENST00000591545 ALPK3Q96L96 1907 aa10.36□□□□□ -0.75
SMARCA4-216ENST00000591545 SUMO4Q6EEV6 95 aa10.36□□□□□ -0.75
SMARCA4-216ENST00000591545 Q8N9W7 124 aa10.36□□□□□ -0.75
SMARCA4-216ENST00000591545 IGFBPL1Q8WX77 278 aa10.35□□□□□ -0.75
SMARCA4-216ENST00000591545 SPART-AS1P0CW21 52 aa10.35□□□□□ -0.75
SMARCA4-216ENST00000591545 CDPF1Q6NVV7 123 aa10.35□□□□□ -0.75
SMARCA4-216ENST00000591545 FGF23Q9GZV9 251 aaPredicted RBP10.35□□□□□ -0.75
SMARCA4-216ENST00000591545 SMAD5-AS1Q9Y6J3 95 aa10.35□□□□□ -0.75
SMARCA4-216ENST00000591545 INSL3P51460 131 aa10.34□□□□□ -0.75
SMARCA4-216ENST00000591545 AMTNQ6UX39 209 aa10.34□□□□□ -0.75
SMARCA4-216ENST00000591545 SIRPDQ9H106 197 aa10.34□□□□□ -0.75
SMARCA4-216ENST00000591545 ORMDL1Q9P0S3 153 aa10.34□□□□□ -0.75
SMARCA4-216ENST00000591545 TRAV25A0A0B4J276 109 aa10.34□□□□□ -0.75
SMARCA4-216ENST00000591545 DENND4AQ7Z401 1863 aa10.34□□□□□ -0.75
SMARCA4-216ENST00000591545 NOP10Q9NPE3 64 aaKnown RBP10.34□□□□□ -0.75
SMARCA4-216ENST00000591545 HIGD1BQ9P298 99 aa10.34□□□□□ -0.75
SMARCA4-216ENST00000591545 C17orf77Q96MU5 243 aa10.34□□□□□ -0.75
SMARCA4-216ENST00000591545 DOCK11Q5JSL3 2073 aa10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 DNAJC9-AS1A6NH13 148 aa10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 TMEM258P61165 79 aa10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 WFDC11Q8NEX6 87 aa10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 IGLL5B9A064 214 aa10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 H3BQ85 93 aa10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 CCL18P55774 89 aa10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 TNFRSF13BO14836 293 aaPredicted RBP10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 PCP2Q8IVA1 136 aa10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 Q8N7P7 452 aa10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 H0YGX0 51 aa10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 I3L2K1 104 aa10.33□□□□□ -0.76
SMARCA4-216ENST00000591545 IGHG2P01859 326 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 ANGP03950 147 aaKnown RBP10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 BAALC-AS2P0C853 105 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 IGHV4OR15-8A0A075B7B6 117 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 A0A087WW49 117 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 A0A096LPF7 62 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 TRAV12-1A0A0B4J245 112 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 CCL25O15444 150 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 LYPD6Q86Y78 171 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 Q9H8V8 135 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 PKIGQ9Y2B9 76 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 ATP5G1P05496 136 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 APRG1Q8IVJ8 170 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 IGLV11-55A0A075B6I3 123 aa10.32□□□□□ -0.76
SMARCA4-216ENST00000591545 A0A0J9YY99 117 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms