RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 ERCC8Q13216 396 aa11.33□□□□□ -0.6
CDK5RAP3-236ENST00000584991 IGFL4Q6B9Z1 124 aa11.33□□□□□ -0.6
CDK5RAP3-236ENST00000584991 HIST2H2BDQ6DRA6 164 aa11.33□□□□□ -0.6
CDK5RAP3-236ENST00000584991 UNQ9165/PRO28630Q6UXU0 137 aa11.33□□□□□ -0.6
CDK5RAP3-236ENST00000584991 C18orf65Q6ZTR6 163 aa11.33□□□□□ -0.6
CDK5RAP3-236ENST00000584991 C8orf86Q6ZUL3 223 aa11.33□□□□□ -0.6
CDK5RAP3-236ENST00000584991 TRAV8-2A0A0B4J237 113 aa11.32□□□□□ -0.6
CDK5RAP3-236ENST00000584991 IGKV3D-20A0A0C4DH25 116 aa11.32□□□□□ -0.6
CDK5RAP3-236ENST00000584991 PRAC2D3DTV9 90 aa11.32□□□□□ -0.6
CDK5RAP3-236ENST00000584991 SNAI2O43623 268 aa11.32□□□□□ -0.6
CDK5RAP3-236ENST00000584991 ATP5LO75964 103 aa11.32□□□□□ -0.6
CDK5RAP3-236ENST00000584991 HSD52Q0P140 79 aa11.32□□□□□ -0.6
CDK5RAP3-236ENST00000584991 KHDC1LQ5JSQ8 128 aa11.32□□□□□ -0.6
CDK5RAP3-236ENST00000584991 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
CDK5RAP3-236ENST00000584991 KIR3DS1Q14943 382 aa11.32□□□□□ -0.6
CDK5RAP3-236ENST00000584991 ANKRD39Q53RE8 183 aa11.32□□□□□ -0.6
CDK5RAP3-236ENST00000584991 C11orf44Q8N8P7 122 aa11.32□□□□□ -0.6
CDK5RAP3-236ENST00000584991 IGHV3OR16-13A0A075B7E8 117 aa11.31□□□□□ -0.6
CDK5RAP3-236ENST00000584991 IGHV3-74A0A0B4J1X5 117 aa11.31□□□□□ -0.6
CDK5RAP3-236ENST00000584991 HLA-DRB4P13762 266 aa11.31□□□□□ -0.6
CDK5RAP3-236ENST00000584991 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
CDK5RAP3-236ENST00000584991 HLA-DRB4X5D2U9 266 aa11.31□□□□□ -0.6
CDK5RAP3-236ENST00000584991 IGHV4OR15-8A0A075B7B6 117 aa11.3□□□□□ -0.6
CDK5RAP3-236ENST00000584991 A0A087WW49 117 aa11.3□□□□□ -0.6
CDK5RAP3-236ENST00000584991 IGHV3-49A0A0A0MS15 119 aa11.3□□□□□ -0.6
CDK5RAP3-236ENST00000584991 IGHV3-66A0A0C4DH42 116 aa11.3□□□□□ -0.6
CDK5RAP3-236ENST00000584991 TRBV7-9A0A0J9YWB2 115 aa11.3□□□□□ -0.6
CDK5RAP3-236ENST00000584991 K7EMI3 77 aa11.3□□□□□ -0.6
CDK5RAP3-236ENST00000584991 CD28P10747 220 aa11.3□□□□□ -0.6
CDK5RAP3-236ENST00000584991 LEPP41159 167 aa11.3□□□□□ -0.6
CDK5RAP3-236ENST00000584991 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
CDK5RAP3-236ENST00000584991 HIGD1BQ9P298 99 aa11.3□□□□□ -0.6
CDK5RAP3-236ENST00000584991 IGLV2-18A0A075B6J9 118 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 H3BRM9 83 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 OVOL1O14753 267 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 DEFB136Q30KP8 78 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 Q6ZVH6 145 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 GPHB5Q86YW7 130 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 GLMPQ8WWB7 406 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 MRAP2Q96G30 205 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 IGHV7-4-1A0A0J9YVY3 117 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 PRB4P10163 310 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 EVI2AP22794 236 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 KLHL30-AS1Q8NEE0 82 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 OR2K2Q8NGT1 345 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 C4orf3Q8WVX3 66 aa11.29□□□□□ -0.6
CDK5RAP3-236ENST00000584991 C7orf71A4D174 169 aa11.28□□□□□ -0.6
CDK5RAP3-236ENST00000584991 MED14OSP0DP75 135 aa11.28□□□□□ -0.6
CDK5RAP3-236ENST00000584991 C16orf92Q96LL3 132 aa11.28□□□□□ -0.6
CDK5RAP3-236ENST00000584991 TP73-AS1Q9UF72 201 aa11.28□□□□□ -0.6
CDK5RAP3-236ENST00000584991 PROK1P58294 105 aa11.27□□□□□ -0.6
CDK5RAP3-236ENST00000584991 LAGE3Q14657 143 aa11.27□□□□□ -0.6
CDK5RAP3-236ENST00000584991 ODF1Q14990 250 aa11.27□□□□□ -0.6
CDK5RAP3-236ENST00000584991 TM4SF20Q53R12 229 aa11.27□□□□□ -0.6
CDK5RAP3-236ENST00000584991 ADAMTSL5Q6ZMM2 481 aa11.27□□□□□ -0.6
CDK5RAP3-236ENST00000584991 CITED2Q99967 270 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP3-236ENST00000584991 C11orf21Q9P2W6 132 aa11.27□□□□□ -0.6
CDK5RAP3-236ENST00000584991 HOXD3P31249 432 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-236ENST00000584991 OR11H1Q8NG94 326 aa11.27□□□□□ -0.61
CDK5RAP3-236ENST00000584991 HHLA3Q9XRX5 114 aa11.27□□□□□ -0.61
CDK5RAP3-236ENST00000584991 A0A1W2PRX2 142 aa11.26□□□□□ -0.61
CDK5RAP3-236ENST00000584991 AMMECR1LQ6DCA0 310 aa11.26□□□□□ -0.61
CDK5RAP3-236ENST00000584991 GTF2H5Q6ZYL4 71 aa11.26□□□□□ -0.61
CDK5RAP3-236ENST00000584991 NRACQ8N912 160 aa11.26□□□□□ -0.61
CDK5RAP3-236ENST00000584991 AP1S3Q96PC3 154 aa11.26□□□□□ -0.61
CDK5RAP3-236ENST00000584991 DUX3Q96PT4 197 aa11.26□□□□□ -0.61
CDK5RAP3-236ENST00000584991 DAZ1Q9NQZ3 744 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-236ENST00000584991 C9orf118A6NHY6 69 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 LINC01619G3V211 115 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 IGKCP01834 107 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 PRSS1P07477 247 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 CDKN1BP46527 198 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 SYNJ2BPP57105 145 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 SPANXN1Q5VSR9 72 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 WFDC12Q8WWY7 111 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 CBY3A6NI87 242 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 K7EMT4 169 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 DPM2O94777 84 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 PPP1R17O96001 155 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 EDN2P20800 178 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 SLURP1P55000 103 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 SAMD13Q5VXD3 122 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 APRG1Q8IVJ8 170 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 TMEM158Q8WZ71 300 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 DKK2Q9UBU2 259 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 UFC1Q9Y3C8 167 aa11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 TSSC4Q9Y5U2 329 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-236ENST00000584991 SMIM17P0DL12 118 aa11.24□□□□□ -0.61
CDK5RAP3-236ENST00000584991 C20orf78Q9BR46 151 aa11.24□□□□□ -0.61
CDK5RAP3-236ENST00000584991 C2CD3Q4AC94 2353 aa11.24□□□□□ -0.61
CDK5RAP3-236ENST00000584991 FXYD7P58549 80 aa11.23□□□□□ -0.61
CDK5RAP3-236ENST00000584991 RBX1P62877 108 aa11.23□□□□□ -0.61
CDK5RAP3-236ENST00000584991 RNASE8Q8TDE3 154 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-236ENST00000584991 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
CDK5RAP3-236ENST00000584991 LGALS9O00182 355 aa11.23□□□□□ -0.61
CDK5RAP3-236ENST00000584991 SOCS3O14543 225 aa11.23□□□□□ -0.61
CDK5RAP3-236ENST00000584991 ORMDL2Q53FV1 153 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 320.2 ms