RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 FAM107AO95990 144 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 IFNA1P01562 189 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 MT-ND6P03923 174 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 CCKP06307 115 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 TCTAP57738 103 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 KRTAP19-7Q3SYF9 63 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 OR5H6Q8NGV6 325 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 BORCS8Q96FH0 119 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 TMEM141Q96I45 108 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 LAMTOR2Q9Y2Q5 125 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 NRXN2Q9P2S2 1712 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 A2MP01023 1474 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 BCL9LQ86UU0 1499 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 CNOT1A5YKK6 2376 aaKnown RBP-0.31□□□□□ -2.46
SKA2-210ENST00000584089 MAP1AP78559 2803 aaPredicted RBP-0.31□□□□□ -2.46
SKA2-210ENST00000584089 BSNQ9UPA5 3926 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 SETD2Q9BYW2 2564 aaPredicted RBP-0.31□□□□□ -2.46
SKA2-210ENST00000584089 LRRC37A3O60309 1634 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 WNK3Q9BYP7 1800 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 KIF13AQ9H1H9 1805 aa-0.31□□□□□ -2.46
SKA2-210ENST00000584089 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.32□□□□□ -2.46
SKA2-210ENST00000584089 A0A0D9SFI3 127 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 TMEM210A6NLX4 147 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 ZNF670-ZNF695F2Z2N8 137 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 PIN1P1O15428 100 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 CSN2P05814 226 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 SPINK8P0C7L1 97 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 COX4I1P13073 169 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 ADCYAP1P18509 176 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 SDC2P34741 201 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 PPP1R2P41236 205 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 POLR2JP52435 117 aaKnown RBP-0.32□□□□□ -2.46
SKA2-210ENST00000584089 GTF2A1P52655 376 aaPredicted RBP-0.32□□□□□ -2.46
SKA2-210ENST00000584089 SSBP1Q04837 148 aaKnown RBP-0.32□□□□□ -2.46
SKA2-210ENST00000584089 DEFB109BQ30KR1 87 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 HSD17B12Q53GQ0 312 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 UNQ5815/PRO19632Q6UWF5 114 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 TMED4Q7Z7H5 227 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 OR5A2Q8NGI9 324 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 CEP19Q96LK0 163 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 LXNQ9BS40 222 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 BOLA2Q9H3K6 86 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 OTORQ9NRC9 128 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 TAS2R8Q9NYW2 309 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 NF1P21359 2839 aa-0.32□□□□□ -2.46
SKA2-210ENST00000584089 DNAJC13O75165 2243 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 USF3Q68DE3 2245 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 PLXNB2O15031 1838 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 PXDNQ92626 1479 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 TRAV13-1A0A0B4J241 112 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 CXorf51AA0A1B0GTR3 108 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 MAP1LC3B2A6NCE7 125 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 TMEM14DPA8MWL7 114 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 CCDC179H3BU77 68 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 GABARAPH6UMI1 98 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 UQCRQO14949 82 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 YPEL1O60688 119 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 CFDP00746 253 aaPredicted RBP-0.33□□□□□ -2.46
SKA2-210ENST00000584089 FABP2P12104 132 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 CCL3L1P16619 93 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 ELOF1P60002 83 aaKnown RBP-0.33□□□□□ -2.46
SKA2-210ENST00000584089 GNG3P63215 75 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 PLGLB1Q02325 96 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 INSL4Q14641 139 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 OR8B8Q15620 311 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 FAM74A4Q5TZK3 123 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 Q5VV11 94 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 SLC48A1Q6P1K1 146 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 MYO7BQ6PIF6 2116 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 OR51A4Q8NGJ6 313 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 CHMP6Q96FZ7 201 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 TAF9BQ9HBM6 251 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 BATF3Q9NR55 127 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 COMMD3Q9UBI1 195 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 METTL1Q9UBP6 276 aaKnown RBP-0.33□□□□□ -2.46
SKA2-210ENST00000584089 SS18L2Q9UHA2 77 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 STOML2Q9UJZ1 356 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 ERG28Q9UKR5 140 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 ARHGAP31Q2M1Z3 1444 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 KDM5CP41229 1560 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 MED23Q9ULK4 1368 aa-0.33□□□□□ -2.46
SKA2-210ENST00000584089 XIRP1Q702N8 1843 aaKnown RBP-0.34□□□□□ -2.46
SKA2-210ENST00000584089 PTPRMP28827 1452 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 GOLGA3Q08378 1498 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 A0A087WTM6 91 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 TRBV10-3A0A0K0K1G6 114 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 TCRBV3S1A0A5B6 114 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 LRRC37A2A6NM11 1700 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 E7EQ34 232 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 PPP5D1E7EU14 171 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 M0R2P5 195 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 M0R3E3 92 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 CDC42EP2O14613 210 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 ZNF609O15014 1411 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 MFSD11O43934 449 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 IGKCP01834 107 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 HBDP02042 147 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 PRM1P04553 51 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 SLC25A4P12235 298 aa-0.34□□□□□ -2.46
SKA2-210ENST00000584089 CKS2P33552 79 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms