RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 DISP2A7MBM2 1401 aa0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 BLMP54132 1417 aaPredicted RBP0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 ZCCHC6Q5VYS8 1495 aaKnown RBP0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 NBDYA0A0U1RRE5 68 aa0.53□□□□□ -2.32
PPP4R1-227ENST00000583988 M0R2P5 195 aa0.53□□□□□ -2.32
PPP4R1-227ENST00000583988 M0R2Z0 102 aa0.53□□□□□ -2.32
PPP4R1-227ENST00000583988 ARPC5O15511 151 aa0.53□□□□□ -2.32
PPP4R1-227ENST00000583988 SMCO1Q147U7 214 aa0.53□□□□□ -2.32
PPP4R1-227ENST00000583988 ZNF56Q15929 161 aa0.53□□□□□ -2.32
PPP4R1-227ENST00000583988 NDUFA11Q86Y39 141 aa0.53□□□□□ -2.32
PPP4R1-227ENST00000583988 SMIM3Q9BZL3 60 aa0.53□□□□□ -2.32
PPP4R1-227ENST00000583988 TMEM14BQ9NUH8 114 aa0.53□□□□□ -2.32
PPP4R1-227ENST00000583988 COPZ2Q9P299 210 aa0.53□□□□□ -2.32
PPP4R1-227ENST00000583988 KCPQ6ZWJ8 1503 aa0.53□□□□□ -2.33
PPP4R1-227ENST00000583988 LRP5O75197 1615 aa0.53□□□□□ -2.33
PPP4R1-227ENST00000583988 ZNF462Q96JM2 2506 aa0.53□□□□□ -2.33
PPP4R1-227ENST00000583988 DLEC1Q9Y238 1755 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 CDK5RAP2Q96SN8 1893 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 TRBV20-1A0A075B6N2 111 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 TRAV12-2A0A075B6T6 113 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 A0A0D9SG42 100 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 TCRBV3S1A0A5B6 114 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 MCRIP1C9JLW8 97 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 NCR2O95944 276 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 SPINK7P58062 85 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 HIST1H1AQ02539 215 aaPredicted RBP0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 CTAGE3PQ8IX95 158 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 TMEM141Q96I45 108 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 DSCR8Q96T75 97 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 BET1LQ9NYM9 111 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 RREB1Q92766 1687 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 ESPL1Q14674 2120 aa0.52□□□□□ -2.33
PPP4R1-227ENST00000583988 ZNF670-ZNF695F2Z2N8 137 aa0.51□□□□□ -2.33
PPP4R1-227ENST00000583988 CEP152O94986 1710 aa0.51□□□□□ -2.33
PPP4R1-227ENST00000583988 LY6G6CO95867 125 aa0.51□□□□□ -2.33
PPP4R1-227ENST00000583988 RPL37P61927 97 aaKnown RBP0.51□□□□□ -2.33
PPP4R1-227ENST00000583988 LSM2Q9Y333 95 aaKnown RBP0.51□□□□□ -2.33
PPP4R1-227ENST00000583988 ASH1LQ9NR48 2969 aaKnown RBP0.51□□□□□ -2.33
PPP4R1-227ENST00000583988 MYH13Q9UKX3 1938 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 LOC285556D6RIA3 1793 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 CXorf51AA0A1B0GTR3 108 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 K7ERU9 68 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 TSPAN19P0C672 248 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 MPC1LP0DKB6 136 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 COX4I1P13073 169 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 SMIM21Q3B7S5 101 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 CYP2G1PQ6ZSU1 146 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 PFDN5Q99471 154 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 PSMG3Q9BT73 122 aaPredicted RBP0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 PLAC8Q9NZF1 115 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 PAIP2BQ9ULR5 123 aaKnown RBP0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 PLXNA2O75051 1894 aa0.5□□□□□ -2.33
PPP4R1-227ENST00000583988 CPDO75976 1380 aa0.49□□□□□ -2.33
PPP4R1-227ENST00000583988 LOC105371267A0A1B0GV96 52 aa0.49□□□□□ -2.33
PPP4R1-227ENST00000583988 RBAKDNA6NC62 111 aa0.49□□□□□ -2.33
PPP4R1-227ENST00000583988 IGLC6P0CF74 106 aa0.49□□□□□ -2.33
PPP4R1-227ENST00000583988 PYYP10082 97 aa0.49□□□□□ -2.33
PPP4R1-227ENST00000583988 SLC25A6P12236 298 aa0.49□□□□□ -2.33
PPP4R1-227ENST00000583988 SPANXN1Q5VSR9 72 aa0.49□□□□□ -2.33
PPP4R1-227ENST00000583988 TSTD1Q8NFU3 115 aa0.49□□□□□ -2.33
PPP4R1-227ENST00000583988 VSTM2AQ8TAG5 236 aa0.49□□□□□ -2.33
PPP4R1-227ENST00000583988 TCEAL4Q96EI5 215 aa0.49□□□□□ -2.33
PPP4R1-227ENST00000583988 FRAS1Q86XX4 4008 aa0.49□□□□□ -2.33
PPP4R1-227ENST00000583988 ERCC6Q03468 1493 aa0.48□□□□□ -2.33
PPP4R1-227ENST00000583988 ABCA4P78363 2273 aa0.48□□□□□ -2.33
PPP4R1-227ENST00000583988 F2Z2F3 143 aa0.48□□□□□ -2.33
PPP4R1-227ENST00000583988 RRAS2P62070 204 aaPredicted RBP0.48□□□□□ -2.33
PPP4R1-227ENST00000583988 RPL7L1Q6DKI1 246 aaKnown RBP0.48□□□□□ -2.33
PPP4R1-227ENST00000583988 SCIMPQ6UWF3 145 aa0.48□□□□□ -2.33
PPP4R1-227ENST00000583988 ZNF142P52746 1687 aaPredicted RBP0.48□□□□□ -2.33
PPP4R1-227ENST00000583988 SYNJ1O43426 1573 aa0.48□□□□□ -2.33
PPP4R1-227ENST00000583988 KIAA0100Q14667 2235 aaKnown RBP0.48□□□□□ -2.33
PPP4R1-227ENST00000583988 KIF13AQ9H1H9 1805 aa0.48□□□□□ -2.33
PPP4R1-227ENST00000583988 PRG4Q92954 1404 aaPredicted RBP0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 CASZ1Q86V15 1759 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 ABCA1O95477 2261 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 FAM236AA0A1B0GUQ0 79 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 FAM236BA0A1B0GV22 79 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 A6NIN4 97 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 COPZ1P61923 177 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 SPCS2Q15005 226 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 FAM74A4Q5TZK3 123 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 LINC01545Q5VT33 79 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 OR2T2Q6IF00 324 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 TSKUQ8WUA8 353 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 IFI27L1Q96BM0 104 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 FAM103A1Q9BTL3 118 aaKnown RBP0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 TPT1P8Q9HAU6 139 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 NAV3Q8IVL0 2385 aa0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 RBBP6Q7Z6E9 1792 aaKnown RBP0.47□□□□□ -2.33
PPP4R1-227ENST00000583988 MYH6P13533 1939 aa0.46□□□□□ -2.34
PPP4R1-227ENST00000583988 A0A096LNT2 108 aa0.46□□□□□ -2.34
PPP4R1-227ENST00000583988 TFF1P04155 84 aa0.46□□□□□ -2.34
PPP4R1-227ENST00000583988 LINC00694P0DN24 101 aa0.46□□□□□ -2.34
PPP4R1-227ENST00000583988 PIPP12273 146 aaPredicted RBP0.46□□□□□ -2.34
PPP4R1-227ENST00000583988 GUCA1AP43080 201 aaPredicted RBP0.46□□□□□ -2.34
PPP4R1-227ENST00000583988 SSBP1Q04837 148 aaKnown RBP0.46□□□□□ -2.34
PPP4R1-227ENST00000583988 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
PPP4R1-227ENST00000583988 NDUFA12Q9UI09 145 aa0.46□□□□□ -2.34
PPP4R1-227ENST00000583988 MAP2P11137 1827 aaKnown RBP0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms