RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TRGV11A0A075B6L2 103 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 PCP4L1A6NKN8 68 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 IFITM10A6NMD0 228 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 D6R8Y8 96 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 M0R381 172 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 GNRH2O43555 120 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 SNAI2O43623 268 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 ZNF324O75467 553 aaPredicted RBP6.91□□□□□ -1.3
SS18-220ENST00000582092 HLA-DRB4P13762 266 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 RAB4AP20338 218 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 MRPL51Q4U2R6 128 aaKnown RBP6.91□□□□□ -1.3
SS18-220ENST00000582092 DMRTA1Q5VZB9 504 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 APRG1Q8IVJ8 170 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 AMN1Q8IY45 258 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 CNFNQ9BYD5 112 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 MAP6D1Q9H9H5 199 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 HLA-DRB4X5D2U9 266 aa6.91□□□□□ -1.3
SS18-220ENST00000582092 TRAV12-2A0A075B6T6 113 aa6.9□□□□□ -1.3
SS18-220ENST00000582092 IGHV1OR15-1A0A075B7D0 117 aa6.9□□□□□ -1.3
SS18-220ENST00000582092 LOC389332A0A1B0GUA5 103 aa6.9□□□□□ -1.3
SS18-220ENST00000582092 CBY3A6NI87 242 aa6.9□□□□□ -1.3
SS18-220ENST00000582092 H3BMM0 161 aa6.9□□□□□ -1.3
SS18-220ENST00000582092 FXYD7P58549 80 aa6.9□□□□□ -1.3
SS18-220ENST00000582092 KRTDAPP60985 99 aa6.9□□□□□ -1.3
SS18-220ENST00000582092 JOSD1Q15040 202 aaPredicted RBP6.9□□□□□ -1.3
SS18-220ENST00000582092 OR10AG1Q8NH19 301 aa6.9□□□□□ -1.3
SS18-220ENST00000582092 TMEM208Q9BTX3 173 aa6.9□□□□□ -1.3
SS18-220ENST00000582092 MAP1LC3AQ9H492 121 aa6.9□□□□□ -1.3
SS18-220ENST00000582092 LAMTOR2Q9Y2Q5 125 aa6.9□□□□□ -1.3
SS18-220ENST00000582092 IGHV4-4A0A075B6R2 117 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 NUPR1O60356 82 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 PPP1R17O96001 155 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 MGPP08493 103 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 HTN1P15515 57 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 DNLZQ5SXM8 178 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 FAM19A2Q8N3H0 131 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 AP1S3Q96PC3 154 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 RCHY1Q96PM5 261 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 LINC01587Q99440 93 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 DPH3P1Q9H4G8 78 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 MSRB1Q9NZV6 116 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 NOTCH3Q9UM47 2321 aa6.89□□□□□ -1.31
SS18-220ENST00000582092 F5H697 171 aa6.88□□□□□ -1.31
SS18-220ENST00000582092 INSP01308 110 aa6.88□□□□□ -1.31
SS18-220ENST00000582092 EVI2AP22794 236 aa6.88□□□□□ -1.31
SS18-220ENST00000582092 KIR3DS1Q14943 382 aa6.88□□□□□ -1.31
SS18-220ENST00000582092 Q6ZQT7 251 aa6.88□□□□□ -1.31
SS18-220ENST00000582092 MRAP2Q96G30 205 aa6.88□□□□□ -1.31
SS18-220ENST00000582092 C20orf144Q9BQM9 153 aa6.88□□□□□ -1.31
SS18-220ENST00000582092 MCRIP2Q9BUT9 160 aaKnown RBP6.88□□□□□ -1.31
SS18-220ENST00000582092 AP5S1Q9NUS5 200 aa6.88□□□□□ -1.31
SS18-220ENST00000582092 ZMAT5Q9UDW3 170 aaKnown RBP6.88□□□□□ -1.31
SS18-220ENST00000582092 HSPB8Q9UJY1 196 aa6.88□□□□□ -1.31
SS18-220ENST00000582092 TP53TG3Q9ULZ0 132 aa6.88□□□□□ -1.31
SS18-220ENST00000582092 U3KQK5 164 aa6.88□□□□□ -1.31
SS18-220ENST00000582092 C20orf202A1L168 122 aa6.87□□□□□ -1.31
SS18-220ENST00000582092 INSL3P51460 131 aa6.87□□□□□ -1.31
SS18-220ENST00000582092 TDRG1Q3Y452 100 aa6.87□□□□□ -1.31
SS18-220ENST00000582092 PYY3Q5JQD4 70 aa6.87□□□□□ -1.31
SS18-220ENST00000582092 NXT2Q9NPJ8 142 aaKnown RBP6.87□□□□□ -1.31
SS18-220ENST00000582092 ZNF256Q9Y2P7 627 aaPredicted RBP6.87□□□□□ -1.31
SS18-220ENST00000582092 PKD1L1Q8TDX9 2849 aa6.87□□□□□ -1.31
SS18-220ENST00000582092 ANK2Q01484 3957 aa6.87□□□□□ -1.31
SS18-220ENST00000582092 ADARB2-AS1A8MUL3 147 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 TSTD3H0UI37 97 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 SMKR1H3BMG3 65 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 LEPROTL1O95214 131 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 TNFRSF6BO95407 300 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 NCR2O95944 276 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 IGLV1-51P01701 117 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 ZNF415Q09FC8 603 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 C9orf66Q5T8R8 295 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 AMTNQ6UX39 209 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 GTSCR1Q86UQ5 136 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 Q8N1Y9 231 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 C14orf178Q8N769 122 aaPredicted RBP6.86□□□□□ -1.31
SS18-220ENST00000582092 CLUHP3Q96NS8 147 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 MAP1LC3CQ9BXW4 147 aa6.86□□□□□ -1.31
SS18-220ENST00000582092 IGHV3-16A0A0C4DH30 117 aa6.85□□□□□ -1.31
SS18-220ENST00000582092 WIPF1O43516 503 aa6.85□□□□□ -1.31
SS18-220ENST00000582092 NPYP01303 97 aa6.85□□□□□ -1.31
SS18-220ENST00000582092 RNASE3P12724 160 aaKnown RBP6.85□□□□□ -1.31
SS18-220ENST00000582092 BTF3P20290 206 aaKnown RBP6.85□□□□□ -1.31
SS18-220ENST00000582092 IFI27P40305 119 aaPredicted RBP6.85□□□□□ -1.31
SS18-220ENST00000582092 LINC00310P59036 64 aa6.85□□□□□ -1.31
SS18-220ENST00000582092 ZNF124Q15973 351 aa6.85□□□□□ -1.31
SS18-220ENST00000582092 SAMD5Q5TGI4 173 aa6.85□□□□□ -1.31
SS18-220ENST00000582092 WFDC9Q8NEX5 89 aa6.85□□□□□ -1.31
SS18-220ENST00000582092 RNF185Q96GF1 192 aa6.85□□□□□ -1.31
SS18-220ENST00000582092 C1QTNF4Q9BXJ3 329 aa6.85□□□□□ -1.31
SS18-220ENST00000582092 SCRT2Q9NQ03 307 aa6.85□□□□□ -1.31
SS18-220ENST00000582092 GOLT1BQ9Y3E0 138 aa6.85□□□□□ -1.31
SS18-220ENST00000582092 IGHV3OR16-12A0A075B7B8 117 aa6.84□□□□□ -1.31
SS18-220ENST00000582092 G3V4G9 280 aa6.84□□□□□ -1.31
SS18-220ENST00000582092 PMCHL1Q16048 86 aa6.84□□□□□ -1.31
SS18-220ENST00000582092 BEAN1Q3B7T3 259 aa6.84□□□□□ -1.31
SS18-220ENST00000582092 ODF3L2Q3SX64 289 aa6.84□□□□□ -1.31
SS18-220ENST00000582092 OXLD1Q5BKU9 147 aa6.84□□□□□ -1.31
SS18-220ENST00000582092 MORN3Q6PF18 240 aaPredicted RBP6.84□□□□□ -1.31
SS18-220ENST00000582092 Q6ZWC4 215 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms