RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 SCRT2Q9NQ03 307 aa13.14□□□□□ -0.31
EIF4A1-216ENST00000580888 DNAH7Q8WXX0 4024 aa13.14□□□□□ -0.31
EIF4A1-216ENST00000580888 HUWE1Q7Z6Z7 4374 aaKnown RBP13.13□□□□□ -0.31
EIF4A1-216ENST00000580888 HLA-DRB4P13762 266 aa13.13□□□□□ -0.31
EIF4A1-216ENST00000580888 INSL3P51460 131 aa13.13□□□□□ -0.31
EIF4A1-216ENST00000580888 CACNG7P62955 275 aa13.13□□□□□ -0.31
EIF4A1-216ENST00000580888 TDRG1Q3Y452 100 aa13.13□□□□□ -0.31
EIF4A1-216ENST00000580888 ANXA2RQ3ZCQ2 193 aa13.13□□□□□ -0.31
EIF4A1-216ENST00000580888 TPPP3Q9BW30 176 aa13.13□□□□□ -0.31
EIF4A1-216ENST00000580888 HLA-DRB4X5D2U9 266 aa13.13□□□□□ -0.31
EIF4A1-216ENST00000580888 C7orf71A4D174 169 aa13.12□□□□□ -0.31
EIF4A1-216ENST00000580888 OR4C46A6NHA9 309 aa13.12□□□□□ -0.31
EIF4A1-216ENST00000580888 NHLRC4P0CG21 123 aaPredicted RBP13.12□□□□□ -0.31
EIF4A1-216ENST00000580888 TSPOP30536 169 aa13.12□□□□□ -0.31
EIF4A1-216ENST00000580888 RCHY1Q96PM5 261 aa13.12□□□□□ -0.31
EIF4A1-216ENST00000580888 C12orf57Q99622 126 aa13.12□□□□□ -0.31
EIF4A1-216ENST00000580888 H3BMM0 161 aa13.11□□□□□ -0.31
EIF4A1-216ENST00000580888 DEFB131AP59861 70 aa13.11□□□□□ -0.31
EIF4A1-216ENST00000580888 PYY3Q5JQD4 70 aa13.11□□□□□ -0.31
EIF4A1-216ENST00000580888 URB1-AS1Q96HZ7 61 aa13.11□□□□□ -0.31
EIF4A1-216ENST00000580888 MAP6D1Q9H9H5 199 aa13.11□□□□□ -0.31
EIF4A1-216ENST00000580888 RYR3Q15413 4870 aa13.11□□□□□ -0.31
EIF4A1-216ENST00000580888 CDKN1BP46527 198 aa13.1□□□□□ -0.31
EIF4A1-216ENST00000580888 TWIST1Q15672 202 aa13.1□□□□□ -0.31
EIF4A1-216ENST00000580888 IQCJQ1A5X6 159 aa13.1□□□□□ -0.31
EIF4A1-216ENST00000580888 OR2K2Q8NGT1 345 aa13.1□□□□□ -0.31
EIF4A1-216ENST00000580888 RNF185Q96GF1 192 aa13.1□□□□□ -0.31
EIF4A1-216ENST00000580888 KCNS1Q96KK3 526 aa13.1□□□□□ -0.31
EIF4A1-216ENST00000580888 WWC2-AS2Q96NR7 200 aa13.1□□□□□ -0.31
EIF4A1-216ENST00000580888 MSRB1Q9NZV6 116 aa13.1□□□□□ -0.31
EIF4A1-216ENST00000580888 J3KRW8 73 aa13.09□□□□□ -0.31
EIF4A1-216ENST00000580888 NXPH4O95158 308 aa13.09□□□□□ -0.31
EIF4A1-216ENST00000580888 RNASE3P12724 160 aaKnown RBP13.09□□□□□ -0.31
EIF4A1-216ENST00000580888 MRPL51Q4U2R6 128 aaKnown RBP13.09□□□□□ -0.31
EIF4A1-216ENST00000580888 OR10AG1Q8NH19 301 aa13.09□□□□□ -0.31
EIF4A1-216ENST00000580888 MUC21A0A0G2JKD1 596 aa13.08□□□□□ -0.32
EIF4A1-216ENST00000580888 MUC21A0A140T8X8 626 aa13.08□□□□□ -0.32
EIF4A1-216ENST00000580888 IGLV1-51P01701 117 aa13.08□□□□□ -0.32
EIF4A1-216ENST00000580888 RAB4AP20338 218 aa13.08□□□□□ -0.32
EIF4A1-216ENST00000580888 ASIPP42127 132 aa13.08□□□□□ -0.32
EIF4A1-216ENST00000580888 JOSD1Q15040 202 aaPredicted RBP13.08□□□□□ -0.32
EIF4A1-216ENST00000580888 MUC21Q5SSG8 566 aa13.08□□□□□ -0.32
EIF4A1-216ENST00000580888 AMN1Q8IY45 258 aa13.08□□□□□ -0.32
EIF4A1-216ENST00000580888 RBMY1BA6NDE4 496 aaKnown RBP13.07□□□□□ -0.32
EIF4A1-216ENST00000580888 RBMY1EA6NEQ0 496 aaKnown RBP13.07□□□□□ -0.32
EIF4A1-216ENST00000580888 KNCNA6PVL3 124 aa13.07□□□□□ -0.32
EIF4A1-216ENST00000580888 H3BVH4 76 aa13.07□□□□□ -0.32
EIF4A1-216ENST00000580888 GNRH2O43555 120 aa13.07□□□□□ -0.32
EIF4A1-216ENST00000580888 RBMY1DP0C7P1 496 aaKnown RBP13.07□□□□□ -0.32
EIF4A1-216ENST00000580888 ODF3L2Q3SX64 289 aa13.07□□□□□ -0.32
EIF4A1-216ENST00000580888 NIT1Q86X76 327 aa13.07□□□□□ -0.32
EIF4A1-216ENST00000580888 CHCHD1Q96BP2 118 aaKnown RBP13.07□□□□□ -0.32
EIF4A1-216ENST00000580888 FAM110AQ9BQ89 295 aa13.07□□□□□ -0.32
EIF4A1-216ENST00000580888 TRAV12-3A0A0B4J271 114 aa13.06□□□□□ -0.32
EIF4A1-216ENST00000580888 CRXO43186 299 aaPredicted RBP13.06□□□□□ -0.32
EIF4A1-216ENST00000580888 PPBPP02775 128 aa13.06□□□□□ -0.32
EIF4A1-216ENST00000580888 CMC4P56277 68 aaPredicted RBP13.06□□□□□ -0.32
EIF4A1-216ENST00000580888 NAGKQ9UJ70 344 aa13.06□□□□□ -0.32
EIF4A1-216ENST00000580888 SPINK13Q1W4C9 94 aa13.05□□□□□ -0.32
EIF4A1-216ENST00000580888 FAM159AQ6UWV7 190 aa13.05□□□□□ -0.32
EIF4A1-216ENST00000580888 ORMDL3Q8N138 153 aa13.05□□□□□ -0.32
EIF4A1-216ENST00000580888 M0R2Z0 102 aa13.04□□□□□ -0.32
EIF4A1-216ENST00000580888 C9orf85Q96MD7 179 aa13.04□□□□□ -0.32
EIF4A1-216ENST00000580888 LAMTOR2Q9Y2Q5 125 aa13.04□□□□□ -0.32
EIF4A1-216ENST00000580888 DYNC2H1Q8NCM8 4307 aaKnown RBP13.03□□□□□ -0.32
EIF4A1-216ENST00000580888 IGHV1OR15-1A0A075B7D0 117 aa13.03□□□□□ -0.32
EIF4A1-216ENST00000580888 D6R8Y8 96 aa13.03□□□□□ -0.32
EIF4A1-216ENST00000580888 IGKV3-20P01619 116 aa13.03□□□□□ -0.32
EIF4A1-216ENST00000580888 LINC00614P0C842 121 aa13.03□□□□□ -0.32
EIF4A1-216ENST00000580888 SPANXN1Q5VSR9 72 aa13.03□□□□□ -0.32
EIF4A1-216ENST00000580888 Q6ZWC4 215 aa13.03□□□□□ -0.32
EIF4A1-216ENST00000580888 DEFB125Q8N687 156 aa13.03□□□□□ -0.32
EIF4A1-216ENST00000580888 POM121L12Q8N7R1 296 aa13.03□□□□□ -0.32
EIF4A1-216ENST00000580888 PRELID3AQ96N28 172 aa13.03□□□□□ -0.32
EIF4A1-216ENST00000580888 LINC00467Q9BRT7 94 aa13.03□□□□□ -0.32
EIF4A1-216ENST00000580888 TRAV12-2A0A075B6T6 113 aa13.02□□□□□ -0.33
EIF4A1-216ENST00000580888 IGHV3-16A0A0C4DH30 117 aa13.02□□□□□ -0.33
EIF4A1-216ENST00000580888 PRSS47A8MTI9 375 aa13.02□□□□□ -0.33
EIF4A1-216ENST00000580888 SAP30O75446 220 aa13.02□□□□□ -0.33
EIF4A1-216ENST00000580888 S100A4P26447 101 aaKnown RBP13.02□□□□□ -0.33
EIF4A1-216ENST00000580888 SSTP61278 116 aa13.02□□□□□ -0.33
EIF4A1-216ENST00000580888 ZNF124Q15973 351 aa13.02□□□□□ -0.33
EIF4A1-216ENST00000580888 C20orf144Q9BQM9 153 aa13.02□□□□□ -0.33
EIF4A1-216ENST00000580888 SAMD10Q9BYL1 202 aa13.02□□□□□ -0.33
EIF4A1-216ENST00000580888 RBMY1A1P0DJD3 496 aaKnown RBP13.01□□□□□ -0.33
EIF4A1-216ENST00000580888 RBMY1CP0DJD4 496 aa13.01□□□□□ -0.33
EIF4A1-216ENST00000580888 PMCHP20382 165 aa13.01□□□□□ -0.33
EIF4A1-216ENST00000580888 EVI2AP22794 236 aa13.01□□□□□ -0.33
EIF4A1-216ENST00000580888 AMTP48728 403 aa13.01□□□□□ -0.33
EIF4A1-216ENST00000580888 RBMY1FQ15415 496 aaKnown RBP13.01□□□□□ -0.33
EIF4A1-216ENST00000580888 SMIM15Q7Z3B0 74 aa13.01□□□□□ -0.33
EIF4A1-216ENST00000580888 C19orf73Q9NVV2 129 aa13.01□□□□□ -0.33
EIF4A1-216ENST00000580888 PHLDA3Q9Y5J5 127 aa13.01□□□□□ -0.33
EIF4A1-216ENST00000580888 LINC01546A6NGU7 62 aa13□□□□□ -0.33
EIF4A1-216ENST00000580888 HSBP1O75506 76 aa13□□□□□ -0.33
EIF4A1-216ENST00000580888 CKS2P33552 79 aa13□□□□□ -0.33
EIF4A1-216ENST00000580888 TRPT1Q86TN4 253 aaKnown RBP13□□□□□ -0.33
EIF4A1-216ENST00000580888 NIT2Q9NQR4 276 aa13□□□□□ -0.33
EIF4A1-216ENST00000580888 OR11H12B2RN74 326 aa12.99□□□□□ -0.33
EIF4A1-216ENST00000580888 CD7P09564 240 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 442.9 ms