RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	C9orf85	Q96MD7	179 aa		6.31	□□□□□ -1.4
MSI2-208	ENST00000579466	CHAC1	Q9BUX1	264 aa		6.31	□□□□□ -1.4
MSI2-208	ENST00000579466		Q9UF83	564 aa		6.31	□□□□□ -1.4
MSI2-208	ENST00000579466	BOLA1	Q9Y3E2	137 aa		6.31	□□□□□ -1.4
MSI2-208	ENST00000579466	URGCP-MRPS24	S4R325	110 aa		6.31	□□□□□ -1.4
MSI2-208	ENST00000579466	RNASE3	P12724	160 aa	Known RBP	6.3	□□□□□ -1.4
MSI2-208	ENST00000579466	LGALSL	Q3ZCW2	172 aa	Predicted RBP	6.3	□□□□□ -1.4
MSI2-208	ENST00000579466	ZFP69	Q49AA0	526 aa		6.3	□□□□□ -1.4
MSI2-208	ENST00000579466	PRNT	Q86SH4	94 aa		6.3	□□□□□ -1.4
MSI2-208	ENST00000579466	C14orf178	Q8N769	122 aa	Predicted RBP	6.3	□□□□□ -1.4
MSI2-208	ENST00000579466	SAMD10	Q9BYL1	202 aa		6.3	□□□□□ -1.4
MSI2-208	ENST00000579466	PARL	Q9H300	379 aa		6.3	□□□□□ -1.4
MSI2-208	ENST00000579466	JPT2	Q9H910	190 aa		6.3	□□□□□ -1.4
MSI2-208	ENST00000579466	KLK12	Q9UKR0	248 aa		6.3	□□□□□ -1.4
MSI2-208	ENST00000579466	HSPB11	Q9Y547	144 aa		6.3	□□□□□ -1.4
MSI2-208	ENST00000579466	TAAR5	O14804	337 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	CIDEA	O60543	219 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	TCRA	P04437	139 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	ARL14EPL	P0DKL9	152 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	LINC00694	P0DN24	101 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	S100A4	P26447	101 aa	Known RBP	6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	ACOT6	Q3I5F7	207 aa	Predicted RBP	6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	MZT2B	Q6NZ67	158 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	PQLC2	Q6ZP29	291 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466		Q8N976	141 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	ENKUR	Q8TC29	256 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	PPP1R1C	Q8WVI7	109 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	UBE2W	Q96B02	151 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	RMI2	Q96E14	147 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	PSG8	Q9UQ74	426 aa		6.29	□□□□□ -1.4
MSI2-208	ENST00000579466	OXT	P01178	125 aa		6.28	□□□□□ -1.4
MSI2-208	ENST00000579466	RPL37A	P61513	92 aa	Known RBP	6.28	□□□□□ -1.4
MSI2-208	ENST00000579466	SMUG1	Q53HV7	270 aa		6.28	□□□□□ -1.4
MSI2-208	ENST00000579466	FAM74A4	Q5TZK3	123 aa		6.28	□□□□□ -1.4
MSI2-208	ENST00000579466	CYB561D1	Q8N8Q1	229 aa		6.28	□□□□□ -1.4
MSI2-208	ENST00000579466	CCDC32	Q9BV29	185 aa		6.28	□□□□□ -1.4
MSI2-208	ENST00000579466	WFDC1	Q9HC57	220 aa		6.28	□□□□□ -1.4
MSI2-208	ENST00000579466	COX11	Q9Y6N1	276 aa		6.28	□□□□□ -1.4
MSI2-208	ENST00000579466		A8MWV9	139 aa		6.27	□□□□□ -1.41
MSI2-208	ENST00000579466		H3BVH4	76 aa		6.27	□□□□□ -1.41
MSI2-208	ENST00000579466		K7EQM0	130 aa		6.27	□□□□□ -1.41
MSI2-208	ENST00000579466	RPL12	P30050	165 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-208	ENST00000579466	HNRNPA3	P51991	378 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-208	ENST00000579466	H2BFS	P57053	126 aa		6.27	□□□□□ -1.41
MSI2-208	ENST00000579466	FLI1	Q01543	452 aa	Predicted RBP	6.27	□□□□□ -1.41
MSI2-208	ENST00000579466	NIT1	Q86X76	327 aa		6.27	□□□□□ -1.41
MSI2-208	ENST00000579466	C5orf17	Q8NAS9	161 aa		6.27	□□□□□ -1.41
MSI2-208	ENST00000579466	OR10G9	Q8NGN4	311 aa		6.27	□□□□□ -1.41
MSI2-208	ENST00000579466	OR10G7	Q8NGN6	311 aa		6.27	□□□□□ -1.41
MSI2-208	ENST00000579466	SH3BGRL3	Q9H299	93 aa		6.27	□□□□□ -1.41
MSI2-208	ENST00000579466		A0A087WWC5	75 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466		A0A087WX48	190 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	TRAV34	A0A0B4J273	112 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	IGKV3D-20	A0A0C4DH25	116 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	RNF222	A6NCQ9	220 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	MPC2	O95563	127 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	IGLV2-11	P01706	119 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	HLA-DQA1	P01909	254 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	ASIP	P42127	132 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	CDC34	P49427	236 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	CYCS	P99999	105 aa	Known RBP	6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	ASAH1	Q13510	395 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	KCNIP4	Q6PIL6	250 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466	ZFP2	Q6ZN57	461 aa		6.26	□□□□□ -1.41
MSI2-208	ENST00000579466		A0A087WWL8	130 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	SERTM2	A0A1B0GWG4	89 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466		M0R036	132 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	SSNA1	O43805	119 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	PET100	P0DJ07	73 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	GCHFR	P30047	84 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	SUMO1	P63165	101 aa	Known RBP	6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	DMRTA1	Q5VZB9	504 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	ARL6IP6	Q8N6S5	226 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	HSD17B11	Q8NBQ5	300 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	OR2G3	Q8NGZ4	309 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	LINC00479	Q96M42	142 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	C1orf43	Q9BWL3	253 aa		6.25	□□□□□ -1.41
MSI2-208	ENST00000579466	GRIFIN	A4D1Z8	144 aa		6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	TMEM262	E9PQX1	116 aa		6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	INMT-MINDY4	F8WBC2	141 aa		6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	CRP	P02741	224 aa		6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	SEC11B	P0C7V7	166 aa		6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	STAG3L2	P0CL84	134 aa		6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	STAG3L3	P0CL85	134 aa		6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	FGF8	P55075	233 aa	Predicted RBP	6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	RAB24	Q969Q5	203 aa		6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	PTH2	Q96A98	100 aa		6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	DAZAP1	Q96EP5	407 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	EPDR1	Q9UM22	224 aa		6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	ARL2-SNX15	V9GYD0	113 aa		6.24	□□□□□ -1.41
MSI2-208	ENST00000579466	RNF213	Q63HN8	5207 aa		6.23	□□□□□ -1.41
MSI2-208	ENST00000579466	TMSB15B	A0A087X1C1	80 aa		6.23	□□□□□ -1.41
MSI2-208	ENST00000579466		B4DEV8	164 aa		6.23	□□□□□ -1.41
MSI2-208	ENST00000579466	USP17L23	D6RBM5	183 aa		6.23	□□□□□ -1.41
MSI2-208	ENST00000579466		M0R381	172 aa		6.23	□□□□□ -1.41
MSI2-208	ENST00000579466	UFSP1	Q6NVU6	142 aa		6.23	□□□□□ -1.41
MSI2-208	ENST00000579466	CLPSL2	Q6UWE3	100 aa		6.23	□□□□□ -1.41
MSI2-208	ENST00000579466	C15orf54	Q8N8G6	183 aa		6.23	□□□□□ -1.41
MSI2-208	ENST00000579466	OR11H4	Q8NGC9	324 aa		6.23	□□□□□ -1.41
MSI2-208	ENST00000579466	RHOD	O00212	210 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms