RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ZC2HC1AQ96GY0 325 aa10.2□□□□□ -0.78
SS18-212ENST00000579061 TXNDC17Q9BRA2 123 aa10.2□□□□□ -0.78
SS18-212ENST00000579061 SIVA1O15304 175 aa10.19□□□□□ -0.78
SS18-212ENST00000579061 LTAP01374 205 aa10.19□□□□□ -0.78
SS18-212ENST00000579061 RAB5CP51148 216 aa10.19□□□□□ -0.78
SS18-212ENST00000579061 ZNF506Q5JVG8 444 aa10.19□□□□□ -0.78
SS18-212ENST00000579061 CFAP126Q5VTH2 177 aa10.19□□□□□ -0.78
SS18-212ENST00000579061 SH2D6Q7Z4S9 175 aa10.19□□□□□ -0.78
SS18-212ENST00000579061 PGPEP1LA6NFU8 196 aa10.18□□□□□ -0.78
SS18-212ENST00000579061 NXPH4O95158 308 aa10.18□□□□□ -0.78
SS18-212ENST00000579061 C1QBP02746 253 aa10.18□□□□□ -0.78
SS18-212ENST00000579061 S100A4P26447 101 aaKnown RBP10.18□□□□□ -0.78
SS18-212ENST00000579061 ASIPP42127 132 aa10.18□□□□□ -0.78
SS18-212ENST00000579061 CRIP1P50238 77 aa10.18□□□□□ -0.78
SS18-212ENST00000579061 ZNF674Q2M3X9 581 aa10.18□□□□□ -0.78
SS18-212ENST00000579061 FAM162BQ5T6X4 162 aa10.18□□□□□ -0.78
SS18-212ENST00000579061 KRTAP1-5Q9BYS1 174 aa10.18□□□□□ -0.78
SS18-212ENST00000579061 IL36BQ9NZH7 164 aa10.18□□□□□ -0.78
SS18-212ENST00000579061 TRAV1-1A0A0B4J248 108 aa10.17□□□□□ -0.78
SS18-212ENST00000579061 TRBV6-4A0A1B0GX49 114 aa10.17□□□□□ -0.78
SS18-212ENST00000579061 B4DEV8 164 aa10.17□□□□□ -0.78
SS18-212ENST00000579061 KRBOX1C9JBD0 128 aa10.17□□□□□ -0.78
SS18-212ENST00000579061 SH2D1AO60880 128 aa10.17□□□□□ -0.78
SS18-212ENST00000579061 MANBALQ9NQG1 85 aa10.17□□□□□ -0.78
SS18-212ENST00000579061 A0A1B0GV50 99 aa10.16□□□□□ -0.78
SS18-212ENST00000579061 A8MWV9 139 aa10.16□□□□□ -0.78
SS18-212ENST00000579061 SULT1A2P50226 295 aa10.16□□□□□ -0.78
SS18-212ENST00000579061 TIRAPP58753 221 aa10.16□□□□□ -0.78
SS18-212ENST00000579061 LINC01559Q495D7 138 aa10.16□□□□□ -0.78
SS18-212ENST00000579061 SCO2A0A1W2PP80 73 aa10.15□□□□□ -0.78
SS18-212ENST00000579061 TEX46H3BTG2 121 aa10.15□□□□□ -0.78
SS18-212ENST00000579061 K7EP13 123 aa10.15□□□□□ -0.78
SS18-212ENST00000579061 MGST1P10620 155 aaKnown RBP10.15□□□□□ -0.78
SS18-212ENST00000579061 TNP2Q05952 138 aa10.15□□□□□ -0.78
SS18-212ENST00000579061 RHOHQ15669 191 aa10.15□□□□□ -0.78
SS18-212ENST00000579061 ZFP2Q6ZN57 461 aa10.15□□□□□ -0.78
SS18-212ENST00000579061 SLC51BQ86UW2 128 aa10.15□□□□□ -0.78
SS18-212ENST00000579061 SLC25A29Q8N8R3 303 aa10.15□□□□□ -0.78
SS18-212ENST00000579061 PRADC1Q9BSG0 188 aa10.15□□□□□ -0.78
SS18-212ENST00000579061 LOC100131303A0A0U1RQF7 123 aa10.14□□□□□ -0.79
SS18-212ENST00000579061 MLST8Q9BVC4 326 aa10.14□□□□□ -0.79
SS18-212ENST00000579061 PARLQ9H300 379 aa10.14□□□□□ -0.79
SS18-212ENST00000579061 DYNC1H1Q14204 4646 aaKnown RBP10.14□□□□□ -0.79
SS18-212ENST00000579061 DNAH11Q96DT5 4516 aa10.14□□□□□ -0.79
SS18-212ENST00000579061 TRAV9-2A0A087WT02 112 aa10.13□□□□□ -0.79
SS18-212ENST00000579061 H3BVH4 76 aa10.13□□□□□ -0.79
SS18-212ENST00000579061 M0R036 132 aa10.13□□□□□ -0.79
SS18-212ENST00000579061 ARMS2P0C7Q2 107 aa10.13□□□□□ -0.79
SS18-212ENST00000579061 AKAP14Q86UN6 197 aa10.13□□□□□ -0.79
SS18-212ENST00000579061 SYT8Q8NBV8 401 aa10.13□□□□□ -0.79
SS18-212ENST00000579061 SCRT2Q9NQ03 307 aa10.13□□□□□ -0.79
SS18-212ENST00000579061 BOLA1Q9Y3E2 137 aa10.13□□□□□ -0.79
SS18-212ENST00000579061 CXCL1P09341 107 aa10.12□□□□□ -0.79
SS18-212ENST00000579061 CCL20P78556 96 aa10.12□□□□□ -0.79
SS18-212ENST00000579061 ZNF575Q86XF7 245 aa10.12□□□□□ -0.79
SS18-212ENST00000579061 BAGE2Q86Y30 109 aa10.12□□□□□ -0.79
SS18-212ENST00000579061 NHLRC2Q8NBF2 726 aa10.12□□□□□ -0.79
SS18-212ENST00000579061 C11orf52Q96A22 123 aa10.12□□□□□ -0.79
SS18-212ENST00000579061 GNG13Q9P2W3 67 aa10.12□□□□□ -0.79
SS18-212ENST00000579061 LY96Q9Y6Y9 160 aa10.12□□□□□ -0.79
SS18-212ENST00000579061 IGHV3-73A0A0B4J1V6 119 aa10.11□□□□□ -0.79
SS18-212ENST00000579061 GRIFINA4D1Z8 144 aa10.11□□□□□ -0.79
SS18-212ENST00000579061 RHODO00212 210 aa10.11□□□□□ -0.79
SS18-212ENST00000579061 DNAH10OSP0CZ25 163 aa10.11□□□□□ -0.79
SS18-212ENST00000579061 MED14OSP0DP75 135 aa10.11□□□□□ -0.79
SS18-212ENST00000579061 LINC00315P59091 139 aa10.11□□□□□ -0.79
SS18-212ENST00000579061 DMRTA1Q5VZB9 504 aa10.11□□□□□ -0.79
SS18-212ENST00000579061 UFSP1Q6NVU6 142 aa10.11□□□□□ -0.79
SS18-212ENST00000579061 WFDC10BQ8IUB3 73 aa10.11□□□□□ -0.79
SS18-212ENST00000579061 PHLDA3Q9Y5J5 127 aa10.11□□□□□ -0.79
SS18-212ENST00000579061 EVI2AP22794 236 aa10.1□□□□□ -0.79
SS18-212ENST00000579061 TMSB15BA0A087X1C1 80 aa10.09□□□□□ -0.79
SS18-212ENST00000579061 RPL35P42766 123 aaKnown RBP10.09□□□□□ -0.79
SS18-212ENST00000579061 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
SS18-212ENST00000579061 NFE4Q86UQ8 179 aa10.09□□□□□ -0.79
SS18-212ENST00000579061 ZFP82Q8N141 532 aa10.09□□□□□ -0.79
SS18-212ENST00000579061 C10orf126Q8N4M7 172 aa10.09□□□□□ -0.79
SS18-212ENST00000579061 SFRP2Q96HF1 295 aa10.09□□□□□ -0.79
SS18-212ENST00000579061 JPT2Q9H910 190 aa10.09□□□□□ -0.79
SS18-212ENST00000579061 HERC2O95714 4834 aa10.08□□□□□ -0.8
SS18-212ENST00000579061 hCG_2014768A0A024R1R8 64 aa10.08□□□□□ -0.8
SS18-212ENST00000579061 PDE6DO43924 150 aa10.08□□□□□ -0.8
SS18-212ENST00000579061 IFNA1P01562 189 aa10.08□□□□□ -0.8
SS18-212ENST00000579061 MEF2BQ02080 365 aaPredicted RBP10.08□□□□□ -0.8
SS18-212ENST00000579061 Q6ZSN1 163 aa10.08□□□□□ -0.8
SS18-212ENST00000579061 C9orf62Q8N4C0 152 aa10.08□□□□□ -0.8
SS18-212ENST00000579061 ATP6V0E2Q8NHE4 81 aa10.08□□□□□ -0.8
SS18-212ENST00000579061 SAMD10Q9BYL1 202 aa10.08□□□□□ -0.8
SS18-212ENST00000579061 GTSF1LQ9H1H1 148 aa10.08□□□□□ -0.8
SS18-212ENST00000579061 TRAV8-6A0A0B4J262 113 aa10.07□□□□□ -0.8
SS18-212ENST00000579061 LINC00694P0DN24 101 aa10.07□□□□□ -0.8
SS18-212ENST00000579061 TAGLN2P37802 199 aaKnown RBP10.07□□□□□ -0.8
SS18-212ENST00000579061 LELP1Q5T871 98 aa10.07□□□□□ -0.8
SS18-212ENST00000579061 SMIM12Q96EX1 92 aa10.07□□□□□ -0.8
SS18-212ENST00000579061 IGHV3-38A0A0C4DH36 116 aa10.06□□□□□ -0.8
SS18-212ENST00000579061 M0R381 172 aa10.06□□□□□ -0.8
SS18-212ENST00000579061 SNAI2O43623 268 aa10.06□□□□□ -0.8
SS18-212ENST00000579061 CRYGDP07320 174 aa10.06□□□□□ -0.8
SS18-212ENST00000579061 OR5AL1P0C617 328 aa10.06□□□□□ -0.8
SS18-212ENST00000579061 BCL2P10415 239 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms