RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 PMVKQ15126 192 aa12.74□□□□□ -0.37
LITAF-209ENST00000571688 TRPT1Q86TN4 253 aaKnown RBP12.74□□□□□ -0.37
LITAF-209ENST00000571688 TPRP12270 2363 aaKnown RBP12.74□□□□□ -0.37
LITAF-209ENST00000571688 EIF4EBP3O60516 100 aaPredicted RBP12.73□□□□□ -0.37
LITAF-209ENST00000571688 PPP1R17O96001 155 aa12.73□□□□□ -0.37
LITAF-209ENST00000571688 Q6Q795 121 aa12.73□□□□□ -0.37
LITAF-209ENST00000571688 FAM110DQ8TAY7 271 aaPredicted RBP12.73□□□□□ -0.37
LITAF-209ENST00000571688 CRLF1O75462 422 aa12.73□□□□□ -0.37
LITAF-209ENST00000571688 IGHV3-33P01772 117 aa12.73□□□□□ -0.37
LITAF-209ENST00000571688 IGF1P05019 195 aa12.73□□□□□ -0.37
LITAF-209ENST00000571688 TP53TG1Q9Y2A0 90 aa12.73□□□□□ -0.37
LITAF-209ENST00000571688 GAGE12JA6NER3 117 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 GAGE7O76087 117 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 GAGE12FP0CL80 117 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 GAGE12GP0CL81 117 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 GAGE12IP0CL82 117 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 GAGE4Q13068 117 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 EBI3Q14213 229 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 KLK9Q2XQG4 91 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 POM121L12Q8N7R1 296 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 KLK9Q9UKQ9 250 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 PHLDA3Q9Y5J5 127 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 IGHV3-49A0A0A0MS15 119 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 P0DMU3 169 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 FAM231AP0DMU4 169 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 FAM231CP0DMU5 169 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 CCDC140Q96MF4 163 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 LINC01600Q96MT4 127 aa12.72□□□□□ -0.37
LITAF-209ENST00000571688 WNK2Q9Y3S1 2297 aa12.71□□□□□ -0.37
LITAF-209ENST00000571688 MED14OSP0DP75 135 aa12.71□□□□□ -0.37
LITAF-209ENST00000571688 S100A4P26447 101 aaKnown RBP12.71□□□□□ -0.37
LITAF-209ENST00000571688 RPL32P62910 135 aaKnown RBP12.71□□□□□ -0.37
LITAF-209ENST00000571688 ZFAND2AQ8N6M9 145 aa12.71□□□□□ -0.37
LITAF-209ENST00000571688 TMEM263Q8WUH6 116 aaKnown RBP12.71□□□□□ -0.37
LITAF-209ENST00000571688 RAX2Q96IS3 184 aa12.71□□□□□ -0.37
LITAF-209ENST00000571688 POLEQ07864 2286 aa12.71□□□□□ -0.38
LITAF-209ENST00000571688 A4D1N5 150 aa12.71□□□□□ -0.38
LITAF-209ENST00000571688 CCDC179H3BU77 68 aa12.71□□□□□ -0.38
LITAF-209ENST00000571688 Q8N1Y9 231 aa12.71□□□□□ -0.38
LITAF-209ENST00000571688 METTL26Q96S19 204 aa12.71□□□□□ -0.38
LITAF-209ENST00000571688 U3KQE9 123 aa12.71□□□□□ -0.38
LITAF-209ENST00000571688 TRAV21A0A0B4J279 112 aa12.7□□□□□ -0.38
LITAF-209ENST00000571688 J3QQQ9 107 aa12.7□□□□□ -0.38
LITAF-209ENST00000571688 M0R1W7 72 aa12.7□□□□□ -0.38
LITAF-209ENST00000571688 IFITM1P13164 125 aa12.7□□□□□ -0.38
LITAF-209ENST00000571688 ZNRF2Q8NHG8 242 aa12.7□□□□□ -0.38
LITAF-209ENST00000571688 NTN5Q8WTR8 489 aaPredicted RBP12.7□□□□□ -0.38
LITAF-209ENST00000571688 TMEM141Q96I45 108 aa12.7□□□□□ -0.38
LITAF-209ENST00000571688 J3KRW8 73 aa12.7□□□□□ -0.38
LITAF-209ENST00000571688 TMEM170BQ5T4T1 132 aa12.7□□□□□ -0.38
LITAF-209ENST00000571688 CLEC19AQ6UXS0 136 aa12.7□□□□□ -0.38
LITAF-209ENST00000571688 ITLN2Q8WWU7 325 aaPredicted RBP12.7□□□□□ -0.38
LITAF-209ENST00000571688 PCNX1Q96RV3 2341 aa12.69□□□□□ -0.38
LITAF-209ENST00000571688 A0A0B4J2C4 111 aa12.69□□□□□ -0.38
LITAF-209ENST00000571688 ANXA2RQ3ZCQ2 193 aa12.69□□□□□ -0.38
LITAF-209ENST00000571688 Q8N9W7 124 aa12.69□□□□□ -0.38
LITAF-209ENST00000571688 C16orf92Q96LL3 132 aa12.69□□□□□ -0.38
LITAF-209ENST00000571688 C20orf173Q96LM9 149 aa12.69□□□□□ -0.38
LITAF-209ENST00000571688 TIMM17AQ99595 171 aa12.69□□□□□ -0.38
LITAF-209ENST00000571688 TRBV7-9A0A0J9YWB2 115 aa12.69□□□□□ -0.38
LITAF-209ENST00000571688 TTC32Q5I0X7 151 aa12.69□□□□□ -0.38
LITAF-209ENST00000571688 CFAP161Q6P656 301 aa12.69□□□□□ -0.38
LITAF-209ENST00000571688 FAM110AQ9BQ89 295 aa12.69□□□□□ -0.38
LITAF-209ENST00000571688 ZNF876PQ49A33 203 aa12.68□□□□□ -0.38
LITAF-209ENST00000571688 VMO1Q7Z5L0 202 aa12.68□□□□□ -0.38
LITAF-209ENST00000571688 ODF3Q96PU9 254 aa12.68□□□□□ -0.38
LITAF-209ENST00000571688 IGHV4OR15-8A0A075B7B6 117 aa12.68□□□□□ -0.38
LITAF-209ENST00000571688 A0A087WW49 117 aa12.68□□□□□ -0.38
LITAF-209ENST00000571688 LGALS3P17931 250 aaKnown RBP12.68□□□□□ -0.38
LITAF-209ENST00000571688 RPL13AP40429 203 aaKnown RBP12.68□□□□□ -0.38
LITAF-209ENST00000571688 RPL39P62891 51 aaKnown RBP12.68□□□□□ -0.38
LITAF-209ENST00000571688 ECSCRQ19T08 205 aa12.68□□□□□ -0.38
LITAF-209ENST00000571688 C9orf139Q6ZV77 190 aa12.68□□□□□ -0.38
LITAF-209ENST00000571688 LINC00477Q96M19 166 aa12.68□□□□□ -0.38
LITAF-209ENST00000571688 BSNQ9UPA5 3926 aa12.67□□□□□ -0.38
LITAF-209ENST00000571688 CEP250Q9BV73 2442 aa12.67□□□□□ -0.38
LITAF-209ENST00000571688 POLR2KP53803 58 aaKnown RBP12.67□□□□□ -0.38
LITAF-209ENST00000571688 LINC01620Q4KN68 170 aa12.67□□□□□ -0.38
LITAF-209ENST00000571688 KIF25-AS1Q9Y6Z4 181 aa12.67□□□□□ -0.38
LITAF-209ENST00000571688 OOSP1A8MZH6 123 aa12.67□□□□□ -0.38
LITAF-209ENST00000571688 LINC00315P59091 139 aa12.67□□□□□ -0.38
LITAF-209ENST00000571688 ATXN8Q156A1 80 aa12.67□□□□□ -0.38
LITAF-209ENST00000571688 ELANEP08246 267 aa12.66□□□□□ -0.38
LITAF-209ENST00000571688 RNASE3P12724 160 aaKnown RBP12.66□□□□□ -0.38
LITAF-209ENST00000571688 LAMA5O15230 3695 aa12.66□□□□□ -0.38
LITAF-209ENST00000571688 CD3EP07766 207 aa12.66□□□□□ -0.38
LITAF-209ENST00000571688 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.65□□□□□ -0.38
LITAF-209ENST00000571688 NXPH4O95158 308 aa12.65□□□□□ -0.38
LITAF-209ENST00000571688 TRAV8-4A0A0B4J246 113 aa12.65□□□□□ -0.38
LITAF-209ENST00000571688 ATP6V0E1O15342 81 aa12.65□□□□□ -0.38
LITAF-209ENST00000571688 CNOT1A5YKK6 2376 aaKnown RBP12.65□□□□□ -0.38
LITAF-209ENST00000571688 MUC4Q99102 2169 aa12.64□□□□□ -0.39
LITAF-209ENST00000571688 TEX49A0A1B0GTD5 131 aa12.64□□□□□ -0.39
LITAF-209ENST00000571688 GNRH2O43555 120 aa12.64□□□□□ -0.39
LITAF-209ENST00000571688 ARL3P36405 182 aa12.64□□□□□ -0.39
LITAF-209ENST00000571688 EEF1AKMT3Q96AZ1 226 aa12.64□□□□□ -0.39
LITAF-209ENST00000571688 TRBV10-2A0A0K0K1G8 114 aa12.64□□□□□ -0.39
LITAF-209ENST00000571688 H7C2G1 150 aa12.64□□□□□ -0.39
LITAF-209ENST00000571688 LEPROTO15243 131 aa12.64□□□□□ -0.39
LITAF-209ENST00000571688 MUSTN1Q8IVN3 82 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms