RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 STPG4Q8N801 248 aa10.19□□□□□ -0.78
CLK3-217ENST00000566126 TMEM75Q8N9X5 138 aa10.19□□□□□ -0.78
CLK3-217ENST00000566126 PSORS1C2Q9UIG4 136 aa10.19□□□□□ -0.78
CLK3-217ENST00000566126 ZNF664Q8N3J9 261 aa10.18□□□□□ -0.78
CLK3-217ENST00000566126 OR2G3Q8NGZ4 309 aa10.18□□□□□ -0.78
CLK3-217ENST00000566126 JPT2Q9H910 190 aa10.18□□□□□ -0.78
CLK3-217ENST00000566126 SCGB1D2O95969 90 aa10.17□□□□□ -0.78
CLK3-217ENST00000566126 RNASE3P12724 160 aaKnown RBP10.17□□□□□ -0.78
CLK3-217ENST00000566126 RANP62826 216 aaKnown RBP10.17□□□□□ -0.78
CLK3-217ENST00000566126 MIR17HGQ75NE6 70 aa10.17□□□□□ -0.78
CLK3-217ENST00000566126 FUNDC2Q9BWH2 189 aa10.17□□□□□ -0.78
CLK3-217ENST00000566126 PRR34Q9NV39 138 aa10.17□□□□□ -0.78
CLK3-217ENST00000566126 IGKV2-24A0A0C4DH68 120 aa10.16□□□□□ -0.78
CLK3-217ENST00000566126 C7orf66A4D0T2 115 aa10.16□□□□□ -0.78
CLK3-217ENST00000566126 A8MWV9 139 aa10.16□□□□□ -0.78
CLK3-217ENST00000566126 CLPSL2Q6UWE3 100 aa10.16□□□□□ -0.78
CLK3-217ENST00000566126 Q6ZRP5 223 aa10.16□□□□□ -0.78
CLK3-217ENST00000566126 PRR26Q8N8Z3 221 aa10.16□□□□□ -0.78
CLK3-217ENST00000566126 PRSS3P2Q8NHM4 247 aa10.16□□□□□ -0.78
CLK3-217ENST00000566126 A0A087WWL8 130 aa10.15□□□□□ -0.78
CLK3-217ENST00000566126 FAM24AA6NFZ4 105 aa10.15□□□□□ -0.78
CLK3-217ENST00000566126 CHAC2Q8WUX2 184 aa10.15□□□□□ -0.78
CLK3-217ENST00000566126 AP5S1Q9NUS5 200 aa10.15□□□□□ -0.78
CLK3-217ENST00000566126 CTDSP2O14595 271 aa10.14□□□□□ -0.79
CLK3-217ENST00000566126 IL18Q14116 193 aa10.14□□□□□ -0.79
CLK3-217ENST00000566126 TREM1Q9NP99 234 aa10.14□□□□□ -0.79
CLK3-217ENST00000566126 UQCC1Q9NVA1 299 aa10.14□□□□□ -0.79
CLK3-217ENST00000566126 UBE2L5PA0A1B0GUS4 154 aa10.13□□□□□ -0.79
CLK3-217ENST00000566126 NDUFS6O75380 124 aaKnown RBP10.13□□□□□ -0.79
CLK3-217ENST00000566126 ZNF80P51504 273 aaPredicted RBP10.13□□□□□ -0.79
CLK3-217ENST00000566126 CACNG7P62955 275 aa10.13□□□□□ -0.79
CLK3-217ENST00000566126 BAXQ07812 192 aa10.13□□□□□ -0.79
CLK3-217ENST00000566126 TRBV6-8A0A0A6YYG3 113 aa10.12□□□□□ -0.79
CLK3-217ENST00000566126 RGS5O15539 181 aa10.12□□□□□ -0.79
CLK3-217ENST00000566126 CST7O76096 145 aa10.12□□□□□ -0.79
CLK3-217ENST00000566126 UBE2D3P61077 147 aa10.12□□□□□ -0.79
CLK3-217ENST00000566126 UBE2D2P62837 147 aa10.12□□□□□ -0.79
CLK3-217ENST00000566126 LGALSLQ3ZCW2 172 aaPredicted RBP10.12□□□□□ -0.79
CLK3-217ENST00000566126 LINC00269Q8N2A0 174 aa10.12□□□□□ -0.79
CLK3-217ENST00000566126 BCL7BQ9BQE9 202 aa10.12□□□□□ -0.79
CLK3-217ENST00000566126 RABL2AQ9UBK7 228 aaPredicted RBP10.12□□□□□ -0.79
CLK3-217ENST00000566126 PIK3CD-AS1Q5SR53 167 aa10.11□□□□□ -0.79
CLK3-217ENST00000566126 IGLV10-54A0A075B6I4 117 aa10.1□□□□□ -0.79
CLK3-217ENST00000566126 MCFD2Q8NI22 146 aa10.1□□□□□ -0.79
CLK3-217ENST00000566126 DIRAS2Q96HU8 199 aa10.1□□□□□ -0.79
CLK3-217ENST00000566126 HYLS1Q96M11 299 aa10.1□□□□□ -0.79
CLK3-217ENST00000566126 Q9H521 79 aa10.1□□□□□ -0.79
CLK3-217ENST00000566126 A0A096LNI7 61 aa10.09□□□□□ -0.79
CLK3-217ENST00000566126 C9orf170A2RU37 121 aa10.09□□□□□ -0.79
CLK3-217ENST00000566126 MBPP02686 304 aaPredicted RBP10.09□□□□□ -0.79
CLK3-217ENST00000566126 FGF7P21781 194 aa10.09□□□□□ -0.79
CLK3-217ENST00000566126 IAH1Q2TAA2 248 aaPredicted RBP10.09□□□□□ -0.79
CLK3-217ENST00000566126 IFNA7P01567 189 aa10.08□□□□□ -0.8
CLK3-217ENST00000566126 GOLT1AQ6ZVE7 132 aa10.08□□□□□ -0.8
CLK3-217ENST00000566126 SLC25A21Q9BQT8 299 aaPredicted RBP10.08□□□□□ -0.8
CLK3-217ENST00000566126 NMES1Q9C002 83 aa10.08□□□□□ -0.8
CLK3-217ENST00000566126 SLIRPQ9GZT3 109 aaKnown RBP10.08□□□□□ -0.8
CLK3-217ENST00000566126 GSKIPQ9P0R6 139 aa10.08□□□□□ -0.8
CLK3-217ENST00000566126 TRBV7-3A0A075B6L6 115 aa10.07□□□□□ -0.8
CLK3-217ENST00000566126 RHODO00212 210 aa10.07□□□□□ -0.8
CLK3-217ENST00000566126 OR7C2O60412 319 aa10.07□□□□□ -0.8
CLK3-217ENST00000566126 PTTG1O95997 202 aa10.07□□□□□ -0.8
CLK3-217ENST00000566126 RBX1P62877 108 aa10.07□□□□□ -0.8
CLK3-217ENST00000566126 CHCHD5Q9BSY4 110 aa10.07□□□□□ -0.8
CLK3-217ENST00000566126 NPCDR1Q9BY65 106 aa10.07□□□□□ -0.8
CLK3-217ENST00000566126 NAA50Q9GZZ1 169 aaKnown RBP10.07□□□□□ -0.8
CLK3-217ENST00000566126 RPS10P46783 165 aaKnown RBP10.06□□□□□ -0.8
CLK3-217ENST00000566126 BCAP31P51572 246 aa10.06□□□□□ -0.8
CLK3-217ENST00000566126 RPL36AP83881 106 aaKnown RBP10.06□□□□□ -0.8
CLK3-217ENST00000566126 CTF1Q16619 201 aa10.06□□□□□ -0.8
CLK3-217ENST00000566126 FAM74A4Q5TZK3 123 aa10.06□□□□□ -0.8
CLK3-217ENST00000566126 RPL36ALQ969Q0 106 aaKnown RBP10.06□□□□□ -0.8
CLK3-217ENST00000566126 TRBV10-1A0A0K0K1A3 114 aa10.05□□□□□ -0.8
CLK3-217ENST00000566126 L7N2F9 121 aa10.05□□□□□ -0.8
CLK3-217ENST00000566126 FAUP35544 74 aaKnown RBP10.05□□□□□ -0.8
CLK3-217ENST00000566126 S100A10P60903 97 aa10.05□□□□□ -0.8
CLK3-217ENST00000566126 VAMP2P63027 116 aa10.05□□□□□ -0.8
CLK3-217ENST00000566126 UBE2L3P68036 154 aaKnown RBP10.05□□□□□ -0.8
CLK3-217ENST00000566126 SPANXN2Q5MJ10 180 aa10.05□□□□□ -0.8
CLK3-217ENST00000566126 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
CLK3-217ENST00000566126 C11orf1Q9H5F2 150 aa10.05□□□□□ -0.8
CLK3-217ENST00000566126 VCX3AQ9NNX9 186 aa10.05□□□□□ -0.8
CLK3-217ENST00000566126 GCGP01275 180 aa10.04□□□□□ -0.8
CLK3-217ENST00000566126 PKIAP61925 76 aa10.04□□□□□ -0.8
CLK3-217ENST00000566126 C15orf56Q8N910 161 aa10.04□□□□□ -0.8
CLK3-217ENST00000566126 OTORQ9NRC9 128 aa10.04□□□□□ -0.8
CLK3-217ENST00000566126 REG3AQ06141 175 aa10.03□□□□□ -0.8
CLK3-217ENST00000566126 INO80EQ8NBZ0 244 aaPredicted RBP10.03□□□□□ -0.8
CLK3-217ENST00000566126 OR10G8Q8NGN5 311 aa10.03□□□□□ -0.8
CLK3-217ENST00000566126 CMTM2Q8TAZ6 248 aa10.03□□□□□ -0.8
CLK3-217ENST00000566126 GFRA4Q9GZZ7 299 aa10.03□□□□□ -0.8
CLK3-217ENST00000566126 RSL24D1Q9UHA3 163 aaKnown RBP10.03□□□□□ -0.8
CLK3-217ENST00000566126 IGKV3D-20A0A0C4DH25 116 aa10.02□□□□□ -0.81
CLK3-217ENST00000566126 S100A11P31949 105 aa10.02□□□□□ -0.81
CLK3-217ENST00000566126 GNG5P63218 68 aa10.02□□□□□ -0.81
CLK3-217ENST00000566126 NTM-AS1Q6ZSK4 140 aa10.02□□□□□ -0.81
CLK3-217ENST00000566126 OR5AC2Q9NZP5 309 aa10.02□□□□□ -0.81
CLK3-217ENST00000566126 A0A087WXM4 84 aa10.01□□□□□ -0.81
CLK3-217ENST00000566126 IGSF23A1L1A6 192 aa10.01□□□□□ -0.81
CLK3-217ENST00000566126 S100A4P26447 101 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms