RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 GNRH2O43555 120 aa15.64■□□□□ 0.09
MAP1LC3B-206ENST00000564844 DUSP14O95147 198 aaKnown RBP15.64■□□□□ 0.09
MAP1LC3B-206ENST00000564844 SUMO2P61956 95 aaKnown RBP15.64■□□□□ 0.09
MAP1LC3B-206ENST00000564844 RASL10AQ92737 203 aa15.64■□□□□ 0.09
MAP1LC3B-206ENST00000564844 LINC01546A6NGU7 62 aa15.63■□□□□ 0.09
MAP1LC3B-206ENST00000564844 GATA3P23771 443 aa15.63■□□□□ 0.09
MAP1LC3B-206ENST00000564844 BAALCQ8WXS3 180 aa15.63■□□□□ 0.09
MAP1LC3B-206ENST00000564844 C2CD3Q4AC94 2353 aa15.63■□□□□ 0.09
MAP1LC3B-206ENST00000564844 CLPSL1A2RUU4 121 aa15.63■□□□□ 0.09
MAP1LC3B-206ENST00000564844 SCGB1C2P0DMR2 95 aa15.63■□□□□ 0.09
MAP1LC3B-206ENST00000564844 ANXA2RQ3ZCQ2 193 aa15.63■□□□□ 0.09
MAP1LC3B-206ENST00000564844 IGHV3-64A0A075B6Q5 118 aa15.62■□□□□ 0.09
MAP1LC3B-206ENST00000564844 TSPAN13O95857 204 aa15.62■□□□□ 0.09
MAP1LC3B-206ENST00000564844 XGP55808 180 aa15.62■□□□□ 0.09
MAP1LC3B-206ENST00000564844 CDIP1Q9H305 208 aa15.62■□□□□ 0.09
MAP1LC3B-206ENST00000564844 ZFAND3Q9H8U3 227 aa15.62■□□□□ 0.09
MAP1LC3B-206ENST00000564844 SRD5A1P18405 259 aa15.62■□□□□ 0.09
MAP1LC3B-206ENST00000564844 JPT2Q9H910 190 aa15.62■□□□□ 0.09
MAP1LC3B-206ENST00000564844 PHLDA3Q9Y5J5 127 aa15.62■□□□□ 0.09
MAP1LC3B-206ENST00000564844 Q6ZS46 218 aa15.62■□□□□ 0.09
MAP1LC3B-206ENST00000564844 TMEM219Q86XT9 240 aa15.62■□□□□ 0.09
MAP1LC3B-206ENST00000564844 DLX4Q92988 240 aaPredicted RBP15.62■□□□□ 0.09
MAP1LC3B-206ENST00000564844 OR11H6Q8NGC7 330 aa15.61■□□□□ 0.09
MAP1LC3B-206ENST00000564844 RAX2Q96IS3 184 aa15.61■□□□□ 0.09
MAP1LC3B-206ENST00000564844 RPL39P62891 51 aaKnown RBP15.61■□□□□ 0.09
MAP1LC3B-206ENST00000564844 TAL2Q16559 108 aa15.61■□□□□ 0.09
MAP1LC3B-206ENST00000564844 C20orf173Q96LM9 149 aa15.61■□□□□ 0.09
MAP1LC3B-206ENST00000564844 CCDC140Q96MF4 163 aa15.61■□□□□ 0.09
MAP1LC3B-206ENST00000564844 SCGB1A1P11684 91 aa15.6■□□□□ 0.09
MAP1LC3B-206ENST00000564844 RNASE4P34096 147 aaKnown RBP15.6■□□□□ 0.09
MAP1LC3B-206ENST00000564844 CFAP126Q5VTH2 177 aa15.6■□□□□ 0.09
MAP1LC3B-206ENST00000564844 NEXN-AS1Q8NBZ9 246 aa15.6■□□□□ 0.09
MAP1LC3B-206ENST00000564844 CSMD2Q7Z408 3487 aa15.6■□□□□ 0.09
MAP1LC3B-206ENST00000564844 SCGB2A1O75556 95 aa15.6■□□□□ 0.09
MAP1LC3B-206ENST00000564844 C1QTNF4Q9BXJ3 329 aa15.6■□□□□ 0.09
MAP1LC3B-206ENST00000564844 TMEM170BQ5T4T1 132 aa15.59■□□□□ 0.09
MAP1LC3B-206ENST00000564844 Q8N9W7 124 aa15.59■□□□□ 0.09
MAP1LC3B-206ENST00000564844 CELSR2Q9HCU4 2923 aa15.59■□□□□ 0.09
MAP1LC3B-206ENST00000564844 ZFP36P26651 326 aaKnown RBP15.59■□□□□ 0.09
MAP1LC3B-206ENST00000564844 TLN2Q9Y4G6 2542 aa15.59■□□□□ 0.09
MAP1LC3B-206ENST00000564844 C11orf86A6NJI1 115 aa15.58■□□□□ 0.08
MAP1LC3B-206ENST00000564844 PRTN3P24158 256 aa15.58■□□□□ 0.08
MAP1LC3B-206ENST00000564844 METTL26Q96S19 204 aa15.58■□□□□ 0.08
MAP1LC3B-206ENST00000564844 TCL1BO95988 128 aa15.58■□□□□ 0.08
MAP1LC3B-206ENST00000564844 PSMG4Q5JS54 123 aa15.58■□□□□ 0.08
MAP1LC3B-206ENST00000564844 MRAP2Q96G30 205 aa15.58■□□□□ 0.08
MAP1LC3B-206ENST00000564844 CARD19Q96LW7 228 aa15.58■□□□□ 0.08
MAP1LC3B-206ENST00000564844 CACNA1AO00555 2505 aa15.58■□□□□ 0.08
MAP1LC3B-206ENST00000564844 MUC4Q99102 2169 aa15.57■□□□□ 0.08
MAP1LC3B-206ENST00000564844 A0A087WWL8 130 aa15.57■□□□□ 0.08
MAP1LC3B-206ENST00000564844 LY6G5BQ8NDX9 201 aa15.57■□□□□ 0.08
MAP1LC3B-206ENST00000564844 F5H697 171 aa15.57■□□□□ 0.08
MAP1LC3B-206ENST00000564844 TOMM6Q96B49 74 aa15.56■□□□□ 0.08
MAP1LC3B-206ENST00000564844 TIMD4Q96H15 378 aa15.56■□□□□ 0.08
MAP1LC3B-206ENST00000564844 OPRPNQ99935 248 aaPredicted RBP15.56■□□□□ 0.08
MAP1LC3B-206ENST00000564844 SLC50A1Q9BRV3 221 aa15.56■□□□□ 0.08
MAP1LC3B-206ENST00000564844 TCF15Q12870 199 aa15.56■□□□□ 0.08
MAP1LC3B-206ENST00000564844 ORMDL2Q53FV1 153 aa15.56■□□□□ 0.08
MAP1LC3B-206ENST00000564844 RNF183Q96D59 192 aa15.56■□□□□ 0.08
MAP1LC3B-206ENST00000564844 TRBV12-3P01733 135 aa15.55■□□□□ 0.08
MAP1LC3B-206ENST00000564844 Q6ZUT4 128 aa15.55■□□□□ 0.08
MAP1LC3B-206ENST00000564844 IGHV3-11P01762 117 aa15.55■□□□□ 0.08
MAP1LC3B-206ENST00000564844 BEX4Q9NWD9 120 aaPredicted RBP15.55■□□□□ 0.08
MAP1LC3B-206ENST00000564844 TP53TG1Q9Y2A0 90 aa15.55■□□□□ 0.08
MAP1LC3B-206ENST00000564844 ODF3BA8MYP8 253 aa15.54■□□□□ 0.08
MAP1LC3B-206ENST00000564844 SRSF2Q01130 221 aaKnown RBP15.54■□□□□ 0.08
MAP1LC3B-206ENST00000564844 FAM74A4Q5TZK3 123 aa15.54■□□□□ 0.08
MAP1LC3B-206ENST00000564844 TSPEAR-AS2P59090 65 aa15.54■□□□□ 0.08
MAP1LC3B-206ENST00000564844 HERV-K104P63124 156 aa15.54■□□□□ 0.08
MAP1LC3B-206ENST00000564844 NACAE9PAV3 2078 aa15.54■□□□□ 0.08
MAP1LC3B-206ENST00000564844 UNQ9165/PRO28630Q6UXU0 137 aa15.54■□□□□ 0.08
MAP1LC3B-206ENST00000564844 MYO9AB2RTY4 2548 aa15.54■□□□□ 0.08
MAP1LC3B-206ENST00000564844 CRIP2P52943 208 aaPredicted RBP15.53■□□□□ 0.08
MAP1LC3B-206ENST00000564844 TRPT1Q86TN4 253 aaKnown RBP15.53■□□□□ 0.08
MAP1LC3B-206ENST00000564844 UBTD1Q9HAC8 227 aa15.53■□□□□ 0.08
MAP1LC3B-206ENST00000564844 TRAV12-1A0A0B4J245 112 aa15.52■□□□□ 0.08
MAP1LC3B-206ENST00000564844 CRYGDP07320 174 aa15.52■□□□□ 0.08
MAP1LC3B-206ENST00000564844 SS18L2Q9UHA2 77 aa15.52■□□□□ 0.08
MAP1LC3B-206ENST00000564844 ZNF256Q9Y2P7 627 aaPredicted RBP15.52■□□□□ 0.08
MAP1LC3B-206ENST00000564844 UTP20O75691 2785 aaKnown RBP15.52■□□□□ 0.08
MAP1LC3B-206ENST00000564844 DPH3P1Q9H4G8 78 aa15.52■□□□□ 0.08
MAP1LC3B-206ENST00000564844 NDUFA11Q86Y39 141 aa15.52■□□□□ 0.07
MAP1LC3B-206ENST00000564844 FAM208BQ5VWN6 2430 aa15.52■□□□□ 0.07
MAP1LC3B-206ENST00000564844 RBAKDNA6NC62 111 aa15.51■□□□□ 0.07
MAP1LC3B-206ENST00000564844 IGKV3-20P01619 116 aa15.51■□□□□ 0.07
MAP1LC3B-206ENST00000564844 ASIPP42127 132 aa15.51■□□□□ 0.07
MAP1LC3B-206ENST00000564844 TSHBP01222 138 aa15.5■□□□□ 0.07
MAP1LC3B-206ENST00000564844 CFC1BP0CG36 223 aa15.5■□□□□ 0.07
MAP1LC3B-206ENST00000564844 CFC1P0CG37 223 aa15.5■□□□□ 0.07
MAP1LC3B-206ENST00000564844 ANKRD29Q8N6D5 301 aa15.5■□□□□ 0.07
MAP1LC3B-206ENST00000564844 USP9XQ93008 2570 aaPredicted RBP15.5■□□□□ 0.07
MAP1LC3B-206ENST00000564844 PTPN13Q12923 2485 aa15.5■□□□□ 0.07
MAP1LC3B-206ENST00000564844 CD7P09564 240 aa15.5■□□□□ 0.07
MAP1LC3B-206ENST00000564844 Q8N6K4 173 aa15.5■□□□□ 0.07
MAP1LC3B-206ENST00000564844 TMEM190Q8WZ59 177 aa15.5■□□□□ 0.07
MAP1LC3B-206ENST00000564844 FAM110DQ8TAY7 271 aaPredicted RBP15.49■□□□□ 0.07
MAP1LC3B-206ENST00000564844 A0A0J9YY99 117 aa15.49■□□□□ 0.07
MAP1LC3B-206ENST00000564844 ADARB2-AS1A8MUL3 147 aa15.49■□□□□ 0.07
MAP1LC3B-206ENST00000564844 UBE2D1P51668 147 aa15.49■□□□□ 0.07
MAP1LC3B-206ENST00000564844 C9orf47Q6ZRZ4 202 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms