RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 DLX6P56179 175 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 UBE2D3P61077 147 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 UBE2D2P62837 147 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 TMEM30BQ3MIR4 351 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 Q6ZS46 218 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 TRPT1Q86TN4 253 aaKnown RBP12.49□□□□□ -0.41
LINC00554-201ENST00000564841 FABP5P3A8MUU1 101 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 H7C2G1 150 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 SCGB1C2P0DMR2 95 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 UBE2D1P51668 147 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 SCGB3A1Q96QR1 104 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 RAX2Q96IS3 184 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 A8MWV9 139 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 J3KRW8 73 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 CD7P09564 240 aa12.48□□□□□ -0.41
LINC00554-201ENST00000564841 TIMM23O14925 209 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 RASL10AQ92737 203 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 ABCA12Q86UK0 2595 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 TRAV8-2A0A0B4J237 113 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 NDUFA11Q86Y39 141 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 LINC00311Q8N616 119 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 CITED1Q99966 193 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 CNFNQ9BYD5 112 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 CUBNO60494 3623 aa12.47□□□□□ -0.41
LINC00554-201ENST00000564841 BUB1B-PAK6H3BSN5 160 aa12.46□□□□□ -0.42
LINC00554-201ENST00000564841 C19orf84I3L1E1 186 aa12.46□□□□□ -0.42
LINC00554-201ENST00000564841 RPL32P62910 135 aaKnown RBP12.46□□□□□ -0.42
LINC00554-201ENST00000564841 CSPG4Q6UVK1 2322 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 C9JAW5 83 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 NDUFV3P56181 108 aaKnown RBP12.45□□□□□ -0.42
LINC00554-201ENST00000564841 OR11H6Q8NGC7 330 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 RPL39LQ96EH5 51 aaKnown RBP12.45□□□□□ -0.42
LINC00554-201ENST00000564841 RAB1BQ9H0U4 201 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 IGHV3-49A0A0A0MS15 119 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 BRI3O95415 125 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 CFC1BP0CG36 223 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 CFC1P0CG37 223 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 PDE6HQ13956 83 aa12.45□□□□□ -0.42
LINC00554-201ENST00000564841 F8W735 103 aaPredicted RBP12.44□□□□□ -0.42
LINC00554-201ENST00000564841 PRORYQ9H606 182 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE2BQ13066 116 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 FBXL19-AS1Q494R0 122 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE2EQ4V326 116 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 NEXN-AS1Q8NBZ9 246 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE2DQ9UEU5 116 aa12.44□□□□□ -0.42
LINC00554-201ENST00000564841 DOPEY1Q5JWR5 2465 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 SPANXN1Q5VSR9 72 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 FAM159AQ6UWV7 190 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 BAALCQ8WXS3 180 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 PTPN13Q12923 2485 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 ELANEP08246 267 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 COX8CQ7Z4L0 72 aa12.43□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 A6NJY4 79 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 RHODO00212 210 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE7O76087 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE12FP0CL80 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE12GP0CL81 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE12IP0CL82 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 GAGE4Q13068 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 IGHV7-4-1A0A0J9YVY3 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 SLC25A20O43772 301 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 IGLV1-47P01700 117 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 COX6B1P14854 86 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 FANCD2OSQ96PS1 177 aa12.42□□□□□ -0.42
LINC00554-201ENST00000564841 TSPEAR-AS2P59090 65 aa12.41□□□□□ -0.42
LINC00554-201ENST00000564841 PRB1P04280 392 aa12.41□□□□□ -0.42
LINC00554-201ENST00000564841 LINC01559Q495D7 138 aa12.41□□□□□ -0.42
LINC00554-201ENST00000564841 NTN5Q8WTR8 489 aaPredicted RBP12.41□□□□□ -0.42
LINC00554-201ENST00000564841 TIMD4Q96H15 378 aa12.41□□□□□ -0.42
LINC00554-201ENST00000564841 SMIM2Q9BVW6 85 aa12.41□□□□□ -0.42
LINC00554-201ENST00000564841 SNCGO76070 127 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 RPL7P18124 248 aaKnown RBP12.4□□□□□ -0.42
LINC00554-201ENST00000564841 TTC32Q5I0X7 151 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 AGPAT4-IT1Q9H0P7 198 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 KAAG1Q9UBP8 84 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 A0A0J9YY99 117 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 M0R381 172 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 IGF1P05019 195 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 SRD5A1P18405 259 aa12.4□□□□□ -0.42
LINC00554-201ENST00000564841 C11orf86A6NJI1 115 aa12.4□□□□□ -0.43
LINC00554-201ENST00000564841 LINC01619G3V211 115 aa12.4□□□□□ -0.43
LINC00554-201ENST00000564841 EIF4EBP3O60516 100 aaPredicted RBP12.4□□□□□ -0.43
LINC00554-201ENST00000564841 C2orf66Q6UXQ4 117 aa12.4□□□□□ -0.43
LINC00554-201ENST00000564841 BEX4Q9NWD9 120 aaPredicted RBP12.4□□□□□ -0.43
LINC00554-201ENST00000564841 TEX49A0A1B0GTD5 131 aa12.39□□□□□ -0.43
LINC00554-201ENST00000564841 TLN2Q9Y4G6 2542 aa12.39□□□□□ -0.43
LINC00554-201ENST00000564841 TRAV12-1A0A0B4J245 112 aa12.39□□□□□ -0.43
LINC00554-201ENST00000564841 SCGB2A1O75556 95 aa12.39□□□□□ -0.43
LINC00554-201ENST00000564841 DUSP14O95147 198 aaKnown RBP12.39□□□□□ -0.43
LINC00554-201ENST00000564841 SBSPONQ8IVN8 264 aa12.39□□□□□ -0.43
LINC00554-201ENST00000564841 ITLN2Q8WWU7 325 aaPredicted RBP12.39□□□□□ -0.43
LINC00554-201ENST00000564841 C14orf178Q8N769 122 aaPredicted RBP12.38□□□□□ -0.43
LINC00554-201ENST00000564841 MFAP4P55083 255 aa12.38□□□□□ -0.43
LINC00554-201ENST00000564841 NDPQ00604 133 aa12.38□□□□□ -0.43
LINC00554-201ENST00000564841 CRYGDP07320 174 aa12.37□□□□□ -0.43
LINC00554-201ENST00000564841 C10orf126Q8N4M7 172 aa12.37□□□□□ -0.43
LINC00554-201ENST00000564841 TOMM6Q96B49 74 aa12.37□□□□□ -0.43
LINC00554-201ENST00000564841 FAM110AQ9BQ89 295 aa12.37□□□□□ -0.43
LINC00554-201ENST00000564841 IGHV4-39P01824 125 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms