RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 PTPRMP28827 1452 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 MED23Q9ULK4 1368 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 NF1P21359 2839 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 BIRC6Q9NR09 4857 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 A0A1B0GV72 72 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 PYYP10082 97 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 PCBD1P61457 104 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 COX6A2Q02221 97 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 ESPL1Q14674 2120 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 BPESC1Q9GZL8 116 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 CENPHQ9H3R5 247 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 BET1LQ9NYM9 111 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 METTL1Q9UBP6 276 aaKnown RBP-0.15□□□□□ -2.43
CHD9-207ENST00000562806 CASZ1Q86V15 1759 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 ZNF142P52746 1687 aaPredicted RBP-0.15□□□□□ -2.43
CHD9-207ENST00000562806 CELSR2Q9HCU4 2923 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 UNC13BO14795 1591 aa-0.15□□□□□ -2.43
CHD9-207ENST00000562806 HIVEP3Q5T1R4 2406 aa-0.16□□□□□ -2.43
CHD9-207ENST00000562806 CDK13Q14004 1512 aaKnown RBP-0.16□□□□□ -2.43
CHD9-207ENST00000562806 A0A087WTM6 91 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 TRAV2A0A0B4J234 112 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 TRAV17A0A0B4J275 112 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 TCRAP04437 139 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 FABP1P07148 127 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 HIST1H1BP16401 226 aaKnown RBP-0.16□□□□□ -2.44
CHD9-207ENST00000562806 PSPHP78330 225 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 PLGLB1Q02325 96 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 EMX2Q04743 252 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 HSD17B12Q53GQ0 312 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 TMEM128Q5BJH2 165 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 SAMD13Q5VXD3 122 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 TAS2R8Q9NYW2 309 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 NDUFAF1Q9Y375 327 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 V9GYQ6 96 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 SOGA1O94964 1423 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 CACNA1HO95180 2353 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 SSC5DA1L4H1 1573 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 LAMC3Q9Y6N6 1575 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 RNF213Q63HN8 5207 aa-0.16□□□□□ -2.44
CHD9-207ENST00000562806 UNC79Q9P2D8 2635 aa-0.17□□□□□ -2.44
CHD9-207ENST00000562806 SRRM2Q9UQ35 2752 aaKnown RBP-0.17□□□□□ -2.44
CHD9-207ENST00000562806 TNXBP22105 4242 aa-0.17□□□□□ -2.44
CHD9-207ENST00000562806 RYR2Q92736 4967 aa-0.17□□□□□ -2.44
CHD9-207ENST00000562806 VIRMAQ69YN4 1812 aaKnown RBP-0.17□□□□□ -2.44
CHD9-207ENST00000562806 OVOS2A0A0G2JMS6 1433 aa-0.17□□□□□ -2.44
CHD9-207ENST00000562806 CXorf51AA0A1B0GTR3 108 aa-0.17□□□□□ -2.44
CHD9-207ENST00000562806 ZNF670-ZNF695F2Z2N8 137 aa-0.17□□□□□ -2.44
CHD9-207ENST00000562806 IGF2RP11717 2491 aa-0.17□□□□□ -2.44
CHD9-207ENST00000562806 ELOF1P60002 83 aaKnown RBP-0.17□□□□□ -2.44
CHD9-207ENST00000562806 TFAMQ00059 246 aaKnown RBP-0.17□□□□□ -2.44
CHD9-207ENST00000562806 SLC25A26Q70HW3 274 aa-0.17□□□□□ -2.44
CHD9-207ENST00000562806 TMEM35BQ8NCS4 154 aa-0.17□□□□□ -2.44
CHD9-207ENST00000562806 SETXQ7Z333 2677 aaKnown RBP-0.17□□□□□ -2.44
CHD9-207ENST00000562806 HELZP42694 1942 aaKnown RBP-0.17□□□□□ -2.44
CHD9-207ENST00000562806 STARD9Q9P2P6 4700 aa-0.17□□□□□ -2.44
CHD9-207ENST00000562806 FLNAP21333 2647 aaKnown RBP-0.17□□□□□ -2.44
CHD9-207ENST00000562806 GVQW2A0A096LPI5 108 aaPredicted RBP-0.18□□□□□ -2.44
CHD9-207ENST00000562806 MT-ND4LP03901 98 aa-0.18□□□□□ -2.44
CHD9-207ENST00000562806 AKR1D1P51857 326 aa-0.18□□□□□ -2.44
CHD9-207ENST00000562806 RPS28P62857 69 aaKnown RBP-0.18□□□□□ -2.44
CHD9-207ENST00000562806 NDUFA11Q86Y39 141 aa-0.18□□□□□ -2.44
CHD9-207ENST00000562806 SLC35B3Q9H1N7 401 aa-0.18□□□□□ -2.44
CHD9-207ENST00000562806 ARAP1Q96P48 1450 aa-0.18□□□□□ -2.44
CHD9-207ENST00000562806 CACNA1AO00555 2505 aa-0.18□□□□□ -2.44
CHD9-207ENST00000562806 FLNCQ14315 2725 aa-0.18□□□□□ -2.44
CHD9-207ENST00000562806 CACNA1CQ13936 2221 aa-0.18□□□□□ -2.44
CHD9-207ENST00000562806 TENM2Q9NT68 2774 aa-0.18□□□□□ -2.44
CHD9-207ENST00000562806 ABCA13Q86UQ4 5058 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 LAMB1P07942 1786 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 UBR5O95071 2799 aaPredicted RBP-0.19□□□□□ -2.44
CHD9-207ENST00000562806 ZANQ9Y493 2812 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 A0A1B0GW64 132 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 TCRBV3S1A0A5B6 114 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 RBAKDNA6NC62 111 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 J3KT08 172 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 DPM2O94777 84 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 S100GP29377 79 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 TMEM91Q6ZNR0 172 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 SMIM11BQ8TCY0 68 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 SKA2Q8WVK7 121 aaPredicted RBP-0.19□□□□□ -2.44
CHD9-207ENST00000562806 DNAJC15Q9Y5T4 150 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 DOPEY1Q5JWR5 2465 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 ZNF292O60281 2723 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 CCDC171Q6TFL3 1326 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 SETD2Q9BYW2 2564 aaPredicted RBP-0.19□□□□□ -2.44
CHD9-207ENST00000562806 FAM208BQ5VWN6 2430 aa-0.19□□□□□ -2.44
CHD9-207ENST00000562806 ABCA1O95477 2261 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 PLXNA1Q9UIW2 1896 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 PDZD2O15018 2839 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 C10orf142B7Z368 130 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 NMBP08949 121 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 SLC25A6P12236 298 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 S100A5P33763 92 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 NPC2P61916 151 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 OR8B8Q15620 311 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 OR2T2Q6IF00 324 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 CYP2G1PQ6ZSU1 146 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 OR8I2Q8N0Y5 310 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms