RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 SACSQ9NZJ4 4579 aa7.06□□□□□ -1.28
HERC1-212ENST00000561348 HYDINQ4G0P3 5121 aa7.06□□□□□ -1.28
HERC1-212ENST00000561348 MUC4Q99102 2169 aa7.05□□□□□ -1.28
HERC1-212ENST00000561348 PGPEP1LA6NFU8 196 aa7.05□□□□□ -1.28
HERC1-212ENST00000561348 LTAP01374 205 aa7.05□□□□□ -1.28
HERC1-212ENST00000561348 CRYBA4P53673 196 aa7.05□□□□□ -1.28
HERC1-212ENST00000561348 RNF212Q495C1 297 aa7.05□□□□□ -1.28
HERC1-212ENST00000561348 TEX261Q6UWH6 196 aa7.05□□□□□ -1.28
HERC1-212ENST00000561348 RASL10AQ92737 203 aa7.05□□□□□ -1.28
HERC1-212ENST00000561348 VSIG2Q96IQ7 327 aa7.05□□□□□ -1.28
HERC1-212ENST00000561348 LINC00588Q9Y4M8 146 aa7.05□□□□□ -1.28
HERC1-212ENST00000561348 TRAV1-1A0A0B4J248 108 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 TRAV4A0A0B4J268 109 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 RAB19A4D1S5 217 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 KRBOX1C9JBD0 128 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 M0R381 172 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 ARMS2P0C7Q2 107 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 RNASE3P12724 160 aaKnown RBP7.04□□□□□ -1.28
HERC1-212ENST00000561348 GYPEP15421 78 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 BLOC1S1P78537 153 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 RPL19P84098 196 aaKnown RBP7.04□□□□□ -1.28
HERC1-212ENST00000561348 MEF2BQ02080 365 aaPredicted RBP7.04□□□□□ -1.28
HERC1-212ENST00000561348 SLAQ13239 276 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 ESRGQ1W209 222 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 ZNF674Q2M3X9 581 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 ZNF506Q5JVG8 444 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 PHLDA3Q9Y5J5 127 aa7.04□□□□□ -1.28
HERC1-212ENST00000561348 MUC21A0A0G2JKD1 596 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 LOC100131303A0A0U1RQF7 123 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 MUC21A0A140T8X8 626 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 BCL2P10415 239 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 SRIP30626 198 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 GNG4P50150 75 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 MRPL23Q16540 153 aaKnown RBP7.03□□□□□ -1.28
HERC1-212ENST00000561348 CENPWQ5EE01 88 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 FAM74A4Q5TZK3 123 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 SYT8Q8NBV8 401 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 DAZAP1Q96EP5 407 aaKnown RBP7.03□□□□□ -1.28
HERC1-212ENST00000561348 C9orf85Q96MD7 179 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 C18orf15Q96N68 181 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 TPPP3Q9BW30 176 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 VAX2Q9UIW0 290 aa7.03□□□□□ -1.28
HERC1-212ENST00000561348 TRBV6-1A0A0K0K1D8 114 aa7.02□□□□□ -1.29
HERC1-212ENST00000561348 LINC00862A6NCI5 91 aa7.02□□□□□ -1.29
HERC1-212ENST00000561348 PDE6DO43924 150 aa7.02□□□□□ -1.29
HERC1-212ENST00000561348 CFAP126Q5VTH2 177 aa7.02□□□□□ -1.29
HERC1-212ENST00000561348 NEGR1Q7Z3B1 354 aa7.02□□□□□ -1.29
HERC1-212ENST00000561348 EIF5A2Q9GZV4 153 aaKnown RBP7.02□□□□□ -1.29
HERC1-212ENST00000561348 Q9H8V8 135 aa7.02□□□□□ -1.29
HERC1-212ENST00000561348 JPT2Q9H910 190 aa7.02□□□□□ -1.29
HERC1-212ENST00000561348 A0A087WWL8 130 aa7.01□□□□□ -1.29
HERC1-212ENST00000561348 H3BNG1 76 aa7.01□□□□□ -1.29
HERC1-212ENST00000561348 K7EQD1 137 aa7.01□□□□□ -1.29
HERC1-212ENST00000561348 RS1O15537 224 aa7.01□□□□□ -1.29
HERC1-212ENST00000561348 RAB14P61106 215 aa7.01□□□□□ -1.29
HERC1-212ENST00000561348 CLLU1Q5K131 121 aa7.01□□□□□ -1.29
HERC1-212ENST00000561348 TXNDC17Q9BRA2 123 aa7.01□□□□□ -1.29
HERC1-212ENST00000561348 IL36BQ9NZH7 164 aa7.01□□□□□ -1.29
HERC1-212ENST00000561348 DNAH1Q9P2D7 4330 aa7□□□□□ -1.29
HERC1-212ENST00000561348 RBFOX3A6NFN3 312 aa7□□□□□ -1.29
HERC1-212ENST00000561348 GZMBP10144 247 aa7□□□□□ -1.29
HERC1-212ENST00000561348 FAM3BP58499 235 aaPredicted RBP7□□□□□ -1.29
HERC1-212ENST00000561348 TOR2AQ5JU69 321 aa7□□□□□ -1.29
HERC1-212ENST00000561348 SOHLH1Q5JUK2 328 aa7□□□□□ -1.29
HERC1-212ENST00000561348 C1orf134Q5TEV5 83 aa7□□□□□ -1.29
HERC1-212ENST00000561348 SLC25A29Q8N8R3 303 aa7□□□□□ -1.29
HERC1-212ENST00000561348 OR2D3Q8NGH3 330 aa7□□□□□ -1.29
HERC1-212ENST00000561348 ZNRF2Q8NHG8 242 aa7□□□□□ -1.29
HERC1-212ENST00000561348 C11orf52Q96A22 123 aa7□□□□□ -1.29
HERC1-212ENST00000561348 PRADC1Q9BSG0 188 aa7□□□□□ -1.29
HERC1-212ENST00000561348 SAMD10Q9BYL1 202 aa7□□□□□ -1.29
HERC1-212ENST00000561348 NBDYA0A0U1RRE5 68 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 GAGE12JA6NER3 117 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 A8MWV9 139 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 NXPH4O95158 308 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
HERC1-212ENST00000561348 GAGE1Q13065 139 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 GAGE4Q13068 117 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 GAGE5Q13069 117 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 GAGE13Q4V321 117 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 SPANXN1Q5VSR9 72 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 LYPD5Q6UWN5 251 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 ZFP82Q8N141 532 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 MLST8Q9BVC4 326 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 PARLQ9H300 379 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 MRPS16Q9Y3D3 137 aaKnown RBP6.99□□□□□ -1.29
HERC1-212ENST00000561348 KMT2AQ03164 3969 aa6.99□□□□□ -1.29
HERC1-212ENST00000561348 PRSS29PA6NIE9 313 aa6.98□□□□□ -1.29
HERC1-212ENST00000561348 SIVA1O15304 175 aa6.98□□□□□ -1.29
HERC1-212ENST00000561348 P01737 135 aa6.98□□□□□ -1.29
HERC1-212ENST00000561348 GATA1P15976 413 aaPredicted RBP6.98□□□□□ -1.29
HERC1-212ENST00000561348 TAGLN2P37802 199 aaKnown RBP6.98□□□□□ -1.29
HERC1-212ENST00000561348 RHOHQ15669 191 aa6.98□□□□□ -1.29
HERC1-212ENST00000561348 Q6ZSN1 163 aa6.98□□□□□ -1.29
HERC1-212ENST00000561348 COX8CQ7Z4L0 72 aa6.98□□□□□ -1.29
HERC1-212ENST00000561348 OR10AG1Q8NH19 301 aa6.98□□□□□ -1.29
HERC1-212ENST00000561348 F5H697 171 aa6.97□□□□□ -1.29
HERC1-212ENST00000561348 IGLV2-8P01709 118 aa6.97□□□□□ -1.29
HERC1-212ENST00000561348 ZNF56Q15929 161 aa6.97□□□□□ -1.29
HERC1-212ENST00000561348 C14orf178Q8N769 122 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms