RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 TRAV3A0A0B4J244 114 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 TRAV40A0A0B4J280 105 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 NDUFB3O43676 98 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 EIF4EBP1Q13541 118 aaPredicted RBP4.99□□□□□ -1.61
IDH3A-206ENST00000558535 KHDC1LQ5JSQ8 128 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 TIMM8BQ9Y5J9 83 aaPredicted RBP4.99□□□□□ -1.61
IDH3A-206ENST00000558535 FER1L5A0AVI2 2057 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 SEC16AO15027 2179 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 BSNQ9UPA5 3926 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 ZNF815PA8K554 130 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 CYSRT1A8MQ03 144 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 D6R8Y8 96 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 COX6B1P14854 86 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 ZNF137PP52743 207 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 PIGYQ3MUY2 71 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 Q6ZPA2 131 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 ITLN2Q8WWU7 325 aaPredicted RBP4.99□□□□□ -1.61
IDH3A-206ENST00000558535 EMC6Q9BV81 110 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 DEFB126Q9BYW3 111 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 MAST4O15021 2626 aa4.99□□□□□ -1.61
IDH3A-206ENST00000558535 USP9YO00507 2555 aaPredicted RBP4.98□□□□□ -1.61
IDH3A-206ENST00000558535 AGRNO00468 2067 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 ESPL1Q14674 2120 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 IGKV1D-43A0A0B4J1Z2 117 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 TRBV10-3A0A0K0K1G6 114 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 LINC01548A6NM66 108 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 H7C423 109 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 CCL21O00585 134 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 CLPSP04118 112 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 CKS2P33552 79 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 SUB1P53999 127 aaKnown RBP eCLIP4.98□□□□□ -1.617e-11■■■■■ 46.1
IDH3A-206ENST00000558535 CDSNQ15517 529 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 NFAM1Q8NET5 270 aaPredicted RBP4.98□□□□□ -1.61
IDH3A-206ENST00000558535 TMEM263Q8WUH6 116 aaKnown RBP4.98□□□□□ -1.61
IDH3A-206ENST00000558535 C1orf159Q96HA4 380 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 MED13Q9UHV7 2174 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 TANC2Q9HCD6 1990 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 A0A0J9YY99 117 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 LST1O00453 97 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 SS18L1O75177 396 aaPredicted RBP4.98□□□□□ -1.61
IDH3A-206ENST00000558535 BEAN1Q3B7T3 259 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 DCANP1Q8TF63 244 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 MRPL35Q9NZE8 188 aaKnown RBP4.98□□□□□ -1.61
IDH3A-206ENST00000558535 POLEQ07864 2286 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 DOPEY2Q9Y3R5 2298 aa4.98□□□□□ -1.61
IDH3A-206ENST00000558535 A0A0J9YX75 114 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 DEFA4P12838 97 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 LGALS3P17931 250 aaKnown RBP4.97□□□□□ -1.61
IDH3A-206ENST00000558535 KLKP1Q107X0 134 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 C10orf128Q5T292 105 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 ITLN1Q8WWA0 313 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 FAM167A-AS1Q96KT0 104 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 RBMY1BA6NDE4 496 aaKnown RBP4.97□□□□□ -1.61
IDH3A-206ENST00000558535 RBMY1EA6NEQ0 496 aaKnown RBP4.97□□□□□ -1.61
IDH3A-206ENST00000558535 OVOL3O00110 214 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 RBMY1DP0C7P1 496 aaKnown RBP4.97□□□□□ -1.61
IDH3A-206ENST00000558535 RBMY1A1P0DJD3 496 aaKnown RBP4.97□□□□□ -1.61
IDH3A-206ENST00000558535 RBMY1CP0DJD4 496 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 RBMY1FQ15415 496 aaKnown RBP4.97□□□□□ -1.61
IDH3A-206ENST00000558535 COX8CQ7Z4L0 72 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 C11orf44Q8N8P7 122 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 ZNF799Q96GE5 643 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 CCDC140Q96MF4 163 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 HS3ST6Q96QI5 342 aa4.97□□□□□ -1.61
IDH3A-206ENST00000558535 RAI1Q7Z5J4 1906 aaPredicted RBP4.97□□□□□ -1.61
IDH3A-206ENST00000558535 USP9XQ93008 2570 aaPredicted RBP4.96□□□□□ -1.61
IDH3A-206ENST00000558535 IGKV1-12A0A0C4DH73 117 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 WNT9BO14905 357 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 IGKV1D-12P01611 117 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 MRPL51Q4U2R6 128 aaKnown RBP4.96□□□□□ -1.62
IDH3A-206ENST00000558535 C9orf139Q6ZV77 190 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 LINC00482Q8N8I6 264 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 TIMM21Q9BVV7 248 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 IGHV3-20A0A0C4DH32 117 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 NDUFS5O43920 106 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 HOXD3P31249 432 aaPredicted RBP4.96□□□□□ -1.62
IDH3A-206ENST00000558535 LAGE3Q14657 143 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 ORMDL2Q53FV1 153 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 SPINK14Q6IE38 97 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 FP248Q71RG6 208 aaPredicted RBP4.96□□□□□ -1.62
IDH3A-206ENST00000558535 LYPD1Q8N2G4 141 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 TMEM75Q8N9X5 138 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 GPHA2Q96T91 129 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 CNFNQ9BYD5 112 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 Q9UF83 564 aa4.96□□□□□ -1.62
IDH3A-206ENST00000558535 NBASA2RRP1 2371 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 IGKV1-27A0A075B6S5 117 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 SDHAF1A6NFY7 115 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 USP17L23D6RBM5 183 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 ARMS2P0C7Q2 107 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 PLGLAQ15195 96 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 Q8IYB0 196 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 WFDC11Q8NEX6 87 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 NUP37Q8NFH4 326 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 SLC50A1Q9BRV3 221 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 TTTY13Q9BZ97 58 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 FLNCQ14315 2725 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 UNC79Q9P2D8 2635 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 TRAV41A0A0B4J266 112 aa4.95□□□□□ -1.62
IDH3A-206ENST00000558535 TMEM223A0PJW6 202 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms