RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SRRM5B3KS81 715 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 IGHV3-33P01772 117 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 STHQ8IWL8 128 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 DEFB123Q8N688 67 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 PLCH1Q4KWH8 1693 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 AGRNO00468 2067 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 PRSS33Q8NF86 280 aa2.86□□□□□ -1.95
ATXN3-248ENST00000558190 ZNF833PQ6ZTB9 187 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 A0A0J9YY99 117 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 MRPL36Q9P0J6 103 aaKnown RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 QSER1Q2KHR3 1735 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 MRPS36P82909 103 aaKnown RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 C2orf91Q6ZV80 131 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 RGPD5Q99666 1765 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 CEMP1Q6PRD7 247 aaPredicted RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 IGKV2-29A2NJV5 120 aaPredicted RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 E7EQL1 145 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 F8WEM9 126 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 TIRAPP58753 221 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 C11orf44Q8N8P7 122 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 RNF114Q9Y508 228 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 A0A0J9YXY3 114 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 LECT2O14960 151 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 C4AP0C0L4 1744 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 C4BP0C0L5 1744 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 COL14A1Q05707 1796 aaKnown RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 CRIP2P52943 208 aaPredicted RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 RNF152Q8N8N0 203 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 DDX60Q8IY21 1712 aaKnown RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 C1orf53Q5VUE5 145 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 VSIG2Q96IQ7 327 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 CDIP1Q9H305 208 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 FAM240AA0A1B0GVK7 77 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 CRYGCP07315 174 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 VPREB1P12018 145 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 WFDC9Q8NEX5 89 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 UPK3BQ9BT76 320 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 NUP188Q5SRE5 1749 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 HEATR5AQ86XA9 2040 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 IGHV3-30-3P0DP02 117 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 KRTAP27-1Q3LI81 207 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 C9orf47Q6ZRZ4 202 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 RPL39P62891 51 aaKnown RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 DAZ4Q86SG3 579 aaKnown RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 SIRPDQ9H106 197 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 DAZ1Q9NQZ3 744 aaKnown RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 C17orf82Q86X59 251 aaPredicted RBP2.85□□□□□ -1.95
ATXN3-248ENST00000558190 XCL1P47992 114 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 CFAP126Q5VTH2 177 aa2.85□□□□□ -1.95
ATXN3-248ENST00000558190 A0A1B0GXF2 115 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 LINC01548A6NM66 108 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 C5orf67F2Z3F1 127 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 I3L2K1 104 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 KIAA1551Q9HCM1 1747 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 IGHV1-58A0A0C4DH39 117 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 TMEM263Q8WUH6 116 aaKnown RBP2.84□□□□□ -1.95
ATXN3-248ENST00000558190 TRBV6-1A0A0K0K1D8 114 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 ZNF80P51504 273 aaPredicted RBP2.84□□□□□ -1.95
ATXN3-248ENST00000558190 ZNFX1Q9P2E3 1918 aaKnown RBP2.84□□□□□ -1.95
ATXN3-248ENST00000558190 NOP10Q9NPE3 64 aaKnown RBP2.84□□□□□ -1.95
ATXN3-248ENST00000558190 P0DMU3 169 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 FAM231AP0DMU4 169 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 FAM231CP0DMU5 169 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 H3BQ85 93 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 UCNP55089 124 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 LRP6O75581 1613 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 PRR4Q16378 134 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 NDUFS5O43920 106 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 ADAMTSL4-AS1Q5T5F5 129 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 EPOPA6NHQ4 379 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 MINOS1-NBL1R4GNA1 71 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 DEFB1P60022 68 aa2.84□□□□□ -1.95
ATXN3-248ENST00000558190 DICER1Q9UPY3 1922 aaKnown RBP2.84□□□□□ -1.95
ATXN3-248ENST00000558190 GAS8-AS1O95177 125 aa2.84□□□□□ -1.96
ATXN3-248ENST00000558190 C20orf203Q8NBC4 194 aa2.84□□□□□ -1.96
ATXN3-248ENST00000558190 RNF185Q96GF1 192 aa2.84□□□□□ -1.96
ATXN3-248ENST00000558190 PSPHP1O15172 72 aa2.84□□□□□ -1.96
ATXN3-248ENST00000558190 TIMM17BO60830 172 aa2.84□□□□□ -1.96
ATXN3-248ENST00000558190 USP17L23D6RBM5 183 aa2.84□□□□□ -1.96
ATXN3-248ENST00000558190 CHD8Q9HCK8 2581 aa2.84□□□□□ -1.96
ATXN3-248ENST00000558190 VWCEQ96DN2 955 aa2.84□□□□□ -1.96
ATXN3-248ENST00000558190 PTPRFP10586 1907 aa2.84□□□□□ -1.96
ATXN3-248ENST00000558190 DAZ2Q13117 558 aaKnown RBP2.84□□□□□ -1.96
ATXN3-248ENST00000558190 DAZ3Q9NR90 486 aaKnown RBP2.84□□□□□ -1.96
ATXN3-248ENST00000558190 IGHV3-30P01768 117 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 IGHV3-30-5P0DP03 117 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 FOXE3Q13461 319 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 TPSG1Q9NRR2 321 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 RREB1Q92766 1687 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 PRR3P79522 188 aaKnown RBP2.83□□□□□ -1.96
ATXN3-248ENST00000558190 LRRK2Q5S007 2527 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 ITGB4P16144 1822 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 LAMB1P07942 1786 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 WDR81Q562E7 1941 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 TEX22C9J3V5 150 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 MTCL1Q9Y4B5 1905 aaKnown RBP2.83□□□□□ -1.96
ATXN3-248ENST00000558190 JMJD7-PLA2G4BH0Y9G9 81 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 SMCHD1A6NHR9 2005 aa2.83□□□□□ -1.96
ATXN3-248ENST00000558190 H3BRN7 92 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms