RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 IGHV3-73A0A0B4J1V6 119 aa9.55□□□□□ -0.88
SNX6-210ENST00000557341 CTXND1A0A1B0GTU2 59 aa9.55□□□□□ -0.88
SNX6-210ENST00000557341 PGPEP1LA6NFU8 196 aa9.55□□□□□ -0.88
SNX6-210ENST00000557341 PSCAO43653 123 aa9.55□□□□□ -0.88
SNX6-210ENST00000557341 RNASE3P12724 160 aaKnown RBP9.55□□□□□ -0.88
SNX6-210ENST00000557341 OR10J3Q5JRS4 329 aa9.55□□□□□ -0.88
SNX6-210ENST00000557341 S100A4P26447 101 aaKnown RBP9.54□□□□□ -0.88
SNX6-210ENST00000557341 ZNF726P1Q15940 193 aa9.54□□□□□ -0.88
SNX6-210ENST00000557341 Q86TA4 180 aa9.54□□□□□ -0.88
SNX6-210ENST00000557341 ARL2-SNX15V9GYD0 113 aa9.54□□□□□ -0.88
SNX6-210ENST00000557341 TRAV34A0A0B4J273 112 aa9.53□□□□□ -0.88
SNX6-210ENST00000557341 EPM2AB3EWF7 344 aa9.53□□□□□ -0.88
SNX6-210ENST00000557341 PEX7O00628 323 aa9.53□□□□□ -0.88
SNX6-210ENST00000557341 IFNA7P01567 189 aa9.53□□□□□ -0.88
SNX6-210ENST00000557341 UBE2G2P60604 165 aa9.53□□□□□ -0.88
SNX6-210ENST00000557341 LELP1Q5T871 98 aa9.53□□□□□ -0.88
SNX6-210ENST00000557341 OR2T35Q8NGX2 323 aa9.53□□□□□ -0.88
SNX6-210ENST00000557341 LINC00479Q96M42 142 aa9.53□□□□□ -0.88
SNX6-210ENST00000557341 IGKV3D-20A0A0C4DH25 116 aa9.52□□□□□ -0.89
SNX6-210ENST00000557341 FABP5P3A8MUU1 101 aa9.52□□□□□ -0.89
SNX6-210ENST00000557341 A8MWV9 139 aa9.52□□□□□ -0.89
SNX6-210ENST00000557341 IBA57-AS1B1ANH7 110 aa9.52□□□□□ -0.89
SNX6-210ENST00000557341 ASIPP42127 132 aa9.52□□□□□ -0.89
SNX6-210ENST00000557341 PIK3CD-AS1Q5SR53 167 aa9.52□□□□□ -0.89
SNX6-210ENST00000557341 AKR1C8PQ5T2L2 129 aa9.52□□□□□ -0.89
SNX6-210ENST00000557341 ATP6V0E2Q8NHE4 81 aa9.52□□□□□ -0.89
SNX6-210ENST00000557341 NKX6-2Q9C056 277 aaPredicted RBP9.52□□□□□ -0.89
SNX6-210ENST00000557341 GTSF1LQ9H1H1 148 aa9.52□□□□□ -0.89
SNX6-210ENST00000557341 PARLQ9H300 379 aa9.52□□□□□ -0.89
SNX6-210ENST00000557341 FAM74A7A6NL05 159 aa9.51□□□□□ -0.89
SNX6-210ENST00000557341 FGF8P55075 233 aaPredicted RBP9.51□□□□□ -0.89
SNX6-210ENST00000557341 XGP55808 180 aa9.51□□□□□ -0.89
SNX6-210ENST00000557341 KRTAP10-1P60331 282 aa9.51□□□□□ -0.89
SNX6-210ENST00000557341 ZFP2Q6ZN57 461 aa9.51□□□□□ -0.89
SNX6-210ENST00000557341 HIST1H2BAQ96A08 127 aa9.51□□□□□ -0.89
SNX6-210ENST00000557341 Q9HAA7 133 aa9.51□□□□□ -0.89
SNX6-210ENST00000557341 IL36BQ9NZH7 164 aa9.51□□□□□ -0.89
SNX6-210ENST00000557341 B4DEV8 164 aa9.5□□□□□ -0.89
SNX6-210ENST00000557341 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
SNX6-210ENST00000557341 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
SNX6-210ENST00000557341 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
SNX6-210ENST00000557341 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
SNX6-210ENST00000557341 GCSHP23434 173 aa9.5□□□□□ -0.89
SNX6-210ENST00000557341 LAGE3Q14657 143 aa9.5□□□□□ -0.89
SNX6-210ENST00000557341 LGALSLQ3ZCW2 172 aaPredicted RBP9.5□□□□□ -0.89
SNX6-210ENST00000557341 IGLV5-52A0A0A0MRZ9 124 aa9.49□□□□□ -0.89
SNX6-210ENST00000557341 MAP1LC3B2A6NCE7 125 aa9.49□□□□□ -0.89
SNX6-210ENST00000557341 LRCOL1A6NCL2 159 aa9.49□□□□□ -0.89
SNX6-210ENST00000557341 H3BVH4 76 aa9.49□□□□□ -0.89
SNX6-210ENST00000557341 SYT8Q8NBV8 401 aa9.49□□□□□ -0.89
SNX6-210ENST00000557341 NTN5Q8WTR8 489 aaPredicted RBP9.49□□□□□ -0.89
SNX6-210ENST00000557341 FRZBQ92765 325 aa9.49□□□□□ -0.89
SNX6-210ENST00000557341 FMC1Q96HJ9 113 aa9.49□□□□□ -0.89
SNX6-210ENST00000557341 MAP1LC3BQ9GZQ8 125 aa9.49□□□□□ -0.89
SNX6-210ENST00000557341 GAGE12JA6NER3 117 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 G3V3Q6 166 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 RHODO00212 210 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 ARPC5O15511 151 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 LINC00694P0DN24 101 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 UBE2G1P62253 170 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 GAGE1Q13065 139 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 GAGE4Q13068 117 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 GAGE5Q13069 117 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 GAGE13Q4V321 117 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 Q5VSD8 79 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 Q8N814 137 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 ZC2HC1AQ96GY0 325 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 ZFP30Q9Y2G7 519 aa9.48□□□□□ -0.89
SNX6-210ENST00000557341 M0R036 132 aa9.47□□□□□ -0.89
SNX6-210ENST00000557341 SH2D1AO60880 128 aa9.47□□□□□ -0.89
SNX6-210ENST00000557341 RGS21Q2M5E4 152 aa9.47□□□□□ -0.89
SNX6-210ENST00000557341 DNLZQ5SXM8 178 aa9.47□□□□□ -0.89
SNX6-210ENST00000557341 FAM162BQ5T6X4 162 aa9.47□□□□□ -0.89
SNX6-210ENST00000557341 Q6ZSN1 163 aa9.47□□□□□ -0.89
SNX6-210ENST00000557341 COX8CQ7Z4L0 72 aa9.47□□□□□ -0.89
SNX6-210ENST00000557341 TCEAL7Q9BRU2 100 aa9.47□□□□□ -0.89
SNX6-210ENST00000557341 FAT1Q14517 4588 aa9.47□□□□□ -0.89
SNX6-210ENST00000557341 KRBOX1C9JBD0 128 aa9.46□□□□□ -0.9
SNX6-210ENST00000557341 ARMS2P0C7Q2 107 aa9.46□□□□□ -0.9
SNX6-210ENST00000557341 FAM74A4Q5TZK3 123 aa9.46□□□□□ -0.9
SNX6-210ENST00000557341 DMRTA1Q5VZB9 504 aa9.46□□□□□ -0.9
SNX6-210ENST00000557341 UFSP1Q6NVU6 142 aa9.46□□□□□ -0.9
SNX6-210ENST00000557341 OR11H4Q8NGC9 324 aa9.46□□□□□ -0.9
SNX6-210ENST00000557341 STOML3Q8TAV4 291 aa9.46□□□□□ -0.9
SNX6-210ENST00000557341 TMEM70Q9BUB7 260 aa9.46□□□□□ -0.9
SNX6-210ENST00000557341 TM2D2Q9BX73 214 aa9.46□□□□□ -0.9
SNX6-210ENST00000557341 SAMD10Q9BYL1 202 aa9.46□□□□□ -0.9
SNX6-210ENST00000557341 JPT2Q9H910 190 aa9.46□□□□□ -0.9
SNX6-210ENST00000557341 SRRM2Q9UQ35 2752 aaKnown RBP9.46□□□□□ -0.9
SNX6-210ENST00000557341 A0A087WWC5 75 aa9.45□□□□□ -0.9
SNX6-210ENST00000557341 FHITP49789 147 aa9.45□□□□□ -0.9
SNX6-210ENST00000557341 CRIP1P50238 77 aa9.45□□□□□ -0.9
SNX6-210ENST00000557341 Q8N3U1 123 aa9.45□□□□□ -0.9
SNX6-210ENST00000557341 C14orf178Q8N769 122 aaPredicted RBP9.45□□□□□ -0.9
SNX6-210ENST00000557341 CYTL1Q9NRR1 136 aa9.45□□□□□ -0.9
SNX6-210ENST00000557341 PHLDA3Q9Y5J5 127 aa9.45□□□□□ -0.9
SNX6-210ENST00000557341 TRAV8-3A0A0A6YYJ7 113 aa9.44□□□□□ -0.9
SNX6-210ENST00000557341 TRBV6-1A0A0K0K1D8 114 aa9.44□□□□□ -0.9
SNX6-210ENST00000557341 GRIFINA4D1Z8 144 aa9.44□□□□□ -0.9
SNX6-210ENST00000557341 LTAP01374 205 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8569.4 ms