RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 CSAG1Q6PB30 78 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 CROCCP2Q86T23 111 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 ANGPTL5Q86XS5 388 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 TCTEX1D1Q8N7M0 179 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 OR5H6Q8NGV6 325 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 CLEC2BQ92478 149 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 LINC00208Q96KT6 92 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 BIN3Q9NQY0 253 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 MED11Q9P086 117 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 TCOF1Q13428 1488 aaKnown RBP-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 FLGP20930 4061 aaPredicted RBP-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 FGD6Q6ZV73 1430 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 APOBP04114 4563 aaKnown RBP-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 XIRP2A4UGR9 3374 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 DOCK4Q8N1I0 1966 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 N4BP2Q86UW6 1770 aaPredicted RBP-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 LAMC3Q9Y6N6 1575 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 DNAH14Q0VDD8 3507 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 PHLPP1O60346 1717 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 VPS13BQ7Z7G8 4022 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 DLC1Q96QB1 1528 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 NUP210LQ5VU65 1888 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 PKHD1L1Q86WI1 4243 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 TRBV27A0A0K0K1C4 114 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 C5orf58C9J3I9 102 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 PPP5D1E7EU14 171 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 GABARAPH6UMI1 98 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 FABP2P12104 132 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 TPT1P13693 172 aaKnown RBP-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 SERPINB1P30740 379 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 DNAJB13P59910 316 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 MAXP61244 160 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 SNRPD3P62318 126 aaKnown RBP-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 C3orf62Q6ZUJ4 267 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 STX19Q8N4C7 294 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 FAM24BQ8N5W8 94 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 C5orf56Q8N8D9 126 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 TMEM229BQ8NBD8 167 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 PRELID3AQ96N28 172 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 HOPXQ9BPY8 73 aaPredicted RBP-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 C19orf12Q9NSK7 152 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 MPC1Q9Y5U8 109 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 SYNMO15061 1565 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 ROCK1Q13464 1354 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 DNAH5Q8TE73 4624 aa-0.07□□□□□ -2.42
SCFD1-214ENST00000554819 CSMD3Q7Z407 3707 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 LPAP08519 4548 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 USP54Q70EL1 1684 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 PTPRQQ9UMZ3 2332 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 SPENQ96T58 3664 aaKnown RBP-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 A0A1W2PPB8 328 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 A0A1W2PRS3 328 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 MAP1LC3B2A6NCE7 125 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 ARL5CA6NH57 179 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 BBIP1A8MTZ0 92 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 KIR3DP1A8MWS1 328 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 TMEM238C9JI98 176 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 BCL2P10415 239 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 SDC2P34741 201 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 CRYBA4P53673 196 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 BASP1P80723 227 aaKnown RBP-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 ZNF56Q15929 161 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 TMEM78Q5T7P6 136 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 C3orf33Q6P1S2 294 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 MORN4Q8NDC4 146 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 SPRR2FQ96RM1 72 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 SACSQ9NZJ4 4579 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 SYNJ1O43426 1573 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 ZZEF1O43149 2961 aa-0.08□□□□□ -2.42
SCFD1-214ENST00000554819 MUC17Q685J3 4493 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 LOC285556D6RIA3 1793 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 DNAH3Q8TD57 4116 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 CMYA5Q8N3K9 4069 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 FAM135BQ49AJ0 1406 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 A0A096LNT2 108 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 TRBV7-6A0A0J9YX20 115 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 LOC101927531A0A1B0GV80 90 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 LOC107986453A0A1B0GWG9 222 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 IFITM5A6NNB3 132 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 HIGD1CA8MV81 97 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 S100A11P31949 105 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 DCUN1D2Q6PH85 259 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 LINC00305Q7Z4B0 112 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 DYDC1Q8WWB3 177 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 PROK2Q9HC23 129 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 LINC00846Q9NV44 126 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 FKBP11Q9NYL4 201 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 MRPL36Q9P0J6 103 aaKnown RBP-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 LAMTOR2Q9Y2Q5 125 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 SMG1Q96Q15 3661 aaKnown RBP-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 PTPRDP23468 1912 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 GOLGB1Q14789 3259 aaKnown RBP-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 DNAH9Q9NYC9 4486 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 LRP5O75197 1615 aa-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.09□□□□□ -2.42
SCFD1-214ENST00000554819 BCORL1Q5H9F3 1711 aa-0.1□□□□□ -2.42
SCFD1-214ENST00000554819 DNAH6Q9C0G6 4158 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 TMEM30CPA0ZSE6 113 aa-0.1□□□□□ -2.43
SCFD1-214ENST00000554819 E5RI56 91 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms