RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PITX3O75364 302 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 IGHV3-7P01780 117 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SLC25A5P05141 298 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SEC11BP0C7V7 166 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SLC25A4P12235 298 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 MPV17P39210 176 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 MUC21Q5SSG8 566 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 Q6ZR03 302 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 KTN1-AS1Q86SY8 53 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 MKXQ8IYA7 352 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 C6orf223Q8N319 242 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 RPP25LQ8N5L8 163 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 RNF182Q8N6D2 247 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 TIMM17AQ99595 171 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 COMMD5Q9GZQ3 224 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 C11orf21Q9P2W6 132 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 PLXNB1O43157 2135 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 TRBV19A0A075B6N1 114 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 IGHV1-69DA0A0B4J2H0 117 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 HMSDA8MTL9 139 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 H3BMG7 143 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 UQCRQO14949 82 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 DUSP14O95147 198 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 LHBP01229 141 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 IGHV1-69P01742 117 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 TRACP01848 142 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 FCGR3AP08637 254 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 PYYP10082 97 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF823P16415 610 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SNRPD3P62318 126 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SUPT4H1P63272 117 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 CCL8P80075 99 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 Q0VG73 95 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 ERCC8Q13216 396 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 MPV17LQ2QL34 196 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 MPV17L2Q567V2 206 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 COA6Q5JTJ3 125 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 CYB561D1Q8N8Q1 229 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 OR10P1Q8NGE3 313 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 OR8B3Q8NGG8 313 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 OR10AG1Q8NH19 301 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 LINC01006Q8NI28 216 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00526Q96FQ7 95 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 RNF185Q96GF1 192 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 OR8B2Q96RD0 313 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 CHCHD5Q9BSY4 110 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 GNB4Q9HAV0 340 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 CYTL1Q9NRR1 136 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 GNG13Q9P2W3 67 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 KIAA1109Q2LD37 5005 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 LOC389332A0A1B0GUA5 103 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 C9orf118A6NHY6 69 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 C12orf77C9JDV5 145 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 TMEM262E9PQX1 116 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 H3BUT2 72 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 LST1O00453 97 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF73O43830 326 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-206ENST00000554429 SSSCA1O60232 199 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IL5P05113 134 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 P0DMU3 169 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 FAM231AP0DMU4 169 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 FAM231CP0DMU5 169 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IGHV4-38-2P0DP08 117 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF20P17024 532 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF32P17041 273 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 MP68P56378 58 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00313P59037 77 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 YPEL3P61236 119 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-206ENST00000554429 DEFB112Q30KQ8 113 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 PIGYQ3MUY2 71 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ETDBQ3ZM63 59 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 BVES-AS1Q5T3Y7 98 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 FAM53AQ6NSI3 398 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-206ENST00000554429 REG3GQ6UW15 175 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 DPPA3Q6W0C5 159 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 SH2D6Q7Z4S9 175 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 OR5AS1Q8N127 324 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 WFDC9Q8NEX5 89 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 NUP35Q8NFH5 326 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 OR5H2Q8NGV7 314 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 OR51H1Q8NH63 302 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 VSTM2AQ8TAG5 236 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IL1F10Q8WWZ1 152 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 PRELID3AQ96N28 172 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 AGPAT4-IT1Q9H0P7 198 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 SLC35B3Q9H1N7 401 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ZNRD1Q9P1U0 126 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00527Q9UJ94 153 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 HHLA3Q9XRX5 114 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 TIMM8BQ9Y5J9 83 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IGLV9-49A0A0B4J1Y8 123 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IZUMO1RA6ND01 250 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 NAP1L6A6NFF2 107 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 E9PLD3 99 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 F8W1H4 67 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 TFF1P04155 84 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IAPPP10997 89 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 VDAC1P21796 283 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 GATA2P23769 480 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-206ENST00000554429 PSMB8P28062 276 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms