RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 PSMB8P28062 276 aa10.67□□□□□ -0.7
CALCOCO1-218ENST00000550804 ITPR2Q14571 2701 aa10.67□□□□□ -0.7
CALCOCO1-218ENST00000550804 CCDC168Q8NDH2 2452 aa10.67□□□□□ -0.7
CALCOCO1-218ENST00000550804 PRRC2AP48634 2157 aaKnown RBP10.67□□□□□ -0.7
CALCOCO1-218ENST00000550804 IGHV4-4A0A075B6R2 117 aa10.67□□□□□ -0.7
CALCOCO1-218ENST00000550804 LINC01546A6NGU7 62 aa10.67□□□□□ -0.7
CALCOCO1-218ENST00000550804 OVOL1O14753 267 aa10.67□□□□□ -0.7
CALCOCO1-218ENST00000550804 S100A4P26447 101 aaKnown RBP10.67□□□□□ -0.7
CALCOCO1-218ENST00000550804 DEFB104AQ8WTQ1 72 aa10.67□□□□□ -0.7
CALCOCO1-218ENST00000550804 VPS25Q9BRG1 176 aa10.67□□□□□ -0.7
CALCOCO1-218ENST00000550804 TTTY13Q9BZ97 58 aa10.67□□□□□ -0.7
CALCOCO1-218ENST00000550804 PDZD2O15018 2839 aa10.66□□□□□ -0.7
CALCOCO1-218ENST00000550804 NMUP48645 174 aa10.66□□□□□ -0.7
CALCOCO1-218ENST00000550804 Q8N8P6 123 aa10.66□□□□□ -0.7
CALCOCO1-218ENST00000550804 FAM19A4Q96LR4 140 aa10.66□□□□□ -0.7
CALCOCO1-218ENST00000550804 DUX5Q96PT3 197 aa10.66□□□□□ -0.7
CALCOCO1-218ENST00000550804 TRAV21A0A0B4J279 112 aa10.65□□□□□ -0.7
CALCOCO1-218ENST00000550804 TAX1BP3O14907 124 aa10.65□□□□□ -0.7
CALCOCO1-218ENST00000550804 FSHBP01225 129 aa10.65□□□□□ -0.7
CALCOCO1-218ENST00000550804 SMIM17P0DL12 118 aa10.65□□□□□ -0.7
CALCOCO1-218ENST00000550804 LENEPQ9Y5L5 61 aa10.65□□□□□ -0.7
CALCOCO1-218ENST00000550804 NF1P21359 2839 aa10.65□□□□□ -0.7
CALCOCO1-218ENST00000550804 GCN1Q92616 2671 aaKnown RBP10.65□□□□□ -0.7
CALCOCO1-218ENST00000550804 IGKV2D-26A0A0A0MRZ7 120 aa10.65□□□□□ -0.7
CALCOCO1-218ENST00000550804 ODF1Q14990 250 aa10.65□□□□□ -0.7
CALCOCO1-218ENST00000550804 RPL39LQ96EH5 51 aaKnown RBP10.65□□□□□ -0.7
CALCOCO1-218ENST00000550804 HHLA3Q9XRX5 114 aa10.65□□□□□ -0.7
CALCOCO1-218ENST00000550804 IGKV3-20P01619 116 aa10.64□□□□□ -0.71
CALCOCO1-218ENST00000550804 RNASE3P12724 160 aaKnown RBP10.64□□□□□ -0.71
CALCOCO1-218ENST00000550804 DCANP1Q8TF63 244 aa10.64□□□□□ -0.71
CALCOCO1-218ENST00000550804 PHLDA3Q9Y5J5 127 aa10.64□□□□□ -0.71
CALCOCO1-218ENST00000550804 C12orf54Q6X4T0 127 aa10.64□□□□□ -0.71
CALCOCO1-218ENST00000550804 FOXC2Q99958 501 aa10.64□□□□□ -0.71
CALCOCO1-218ENST00000550804 UNC79Q9P2D8 2635 aa10.63□□□□□ -0.71
CALCOCO1-218ENST00000550804 BOD1L2Q8IYS8 172 aa10.63□□□□□ -0.71
CALCOCO1-218ENST00000550804 DEFB125Q8N687 156 aa10.63□□□□□ -0.71
CALCOCO1-218ENST00000550804 JPT2Q9H910 190 aa10.63□□□□□ -0.71
CALCOCO1-218ENST00000550804 SONP18583 2426 aaKnown RBP10.63□□□□□ -0.71
CALCOCO1-218ENST00000550804 C7orf71A4D174 169 aa10.63□□□□□ -0.71
CALCOCO1-218ENST00000550804 ZNF688P0C7X2 276 aa10.63□□□□□ -0.71
CALCOCO1-218ENST00000550804 ASIPP42127 132 aa10.63□□□□□ -0.71
CALCOCO1-218ENST00000550804 LAGE3Q14657 143 aa10.63□□□□□ -0.71
CALCOCO1-218ENST00000550804 HIST2H2BDQ6DRA6 164 aa10.63□□□□□ -0.71
CALCOCO1-218ENST00000550804 RASL10AQ92737 203 aa10.63□□□□□ -0.71
CALCOCO1-218ENST00000550804 WFDC11Q8NEX6 87 aa10.62□□□□□ -0.71
CALCOCO1-218ENST00000550804 DPF1Q92782 380 aa10.62□□□□□ -0.71
CALCOCO1-218ENST00000550804 SYNJ2BPP57105 145 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 GTSCR1Q86UQ5 136 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 OR4C5Q8NGB2 326 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 TMEM160Q9NX00 188 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 TRAV12-2A0A075B6T6 113 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 TRAV12-3A0A0B4J271 114 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 MGPP08493 103 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 VAMP3Q15836 100 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 TMEM97Q5BJF2 176 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 PSMG4Q5JS54 123 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 OR1N2Q8NGR9 330 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 ZMAT4Q9H898 229 aa10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 FLNAP21333 2647 aaKnown RBP10.61□□□□□ -0.71
CALCOCO1-218ENST00000550804 AKAP9Q99996 3911 aa10.6□□□□□ -0.71
CALCOCO1-218ENST00000550804 K7EMT4 169 aa10.6□□□□□ -0.71
CALCOCO1-218ENST00000550804 NEGR1Q7Z3B1 354 aa10.6□□□□□ -0.71
CALCOCO1-218ENST00000550804 MRPL35Q9NZE8 188 aaKnown RBP10.6□□□□□ -0.71
CALCOCO1-218ENST00000550804 NIPBLQ6KC79 2804 aaeCLIP10.6□□□□□ -0.71
CALCOCO1-218ENST00000550804 Q6YL49 198 aa10.6□□□□□ -0.71
CALCOCO1-218ENST00000550804 APRG1Q8IVJ8 170 aa10.6□□□□□ -0.71
CALCOCO1-218ENST00000550804 OCIAD2Q56VL3 154 aa10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 C18orf65Q6ZTR6 163 aa10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 SETD2Q9BYW2 2564 aaPredicted RBP10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 AGRNO00468 2067 aa10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 KLLNB2CW77 178 aa10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 IGKCP01834 107 aa10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 SUMO2P61956 95 aaKnown RBP10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 ZC2HC1BQ5TFG8 222 aa10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 AMMECR1LQ6DCA0 310 aa10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 MYOZ3Q8TDC0 251 aa10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 SMIM2Q9BVW6 85 aa10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 ZNF580Q9UK33 172 aa10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 MUC4Q99102 2169 aa10.59□□□□□ -0.71
CALCOCO1-218ENST00000550804 HOXA3O43365 443 aaPredicted RBP10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 ADAMTSL5Q6ZMM2 481 aa10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 MRAP2Q96G30 205 aa10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 NAA38Q9BRA0 125 aaKnown RBP10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 CST9LQ9H4G1 147 aa10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 DPH3P1Q9H4G8 78 aa10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 IGHV4OR15-8A0A075B7B6 117 aa10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 A0A087WW49 117 aa10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 A0A087WWL8 130 aa10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 TRAV8-6A0A0B4J262 113 aa10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 DEFB136Q30KP8 78 aa10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
CALCOCO1-218ENST00000550804 CD7P09564 240 aa10.57□□□□□ -0.72
CALCOCO1-218ENST00000550804 ID1P41134 155 aa10.57□□□□□ -0.72
CALCOCO1-218ENST00000550804 LINC00315P59091 139 aa10.57□□□□□ -0.72
CALCOCO1-218ENST00000550804 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
CALCOCO1-218ENST00000550804 CLUHP3Q96NS8 147 aa10.57□□□□□ -0.72
CALCOCO1-218ENST00000550804 ZNF702PQ9H963 129 aa10.56□□□□□ -0.72
CALCOCO1-218ENST00000550804 MDFICQ9P1T7 246 aa10.56□□□□□ -0.72
CALCOCO1-218ENST00000550804 HECTD1Q9ULT8 2610 aa10.55□□□□□ -0.72
CALCOCO1-218ENST00000550804 K7EMI3 77 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms