RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 NACAE9PAV3 2078 aa18.05■□□□□ 0.48
CPSF6-205ENST00000550075 ZNF506Q5JVG8 444 aa18.05■□□□□ 0.48
CPSF6-205ENST00000550075 DNLZQ5SXM8 178 aa18.05■□□□□ 0.48
CPSF6-205ENST00000550075 PCNPQ8WW12 178 aaKnown RBP18.05■□□□□ 0.48
CPSF6-205ENST00000550075 MLST8Q9BVC4 326 aa18.05■□□□□ 0.48
CPSF6-205ENST00000550075 H3BVH4 76 aa18.04■□□□□ 0.48
CPSF6-205ENST00000550075 PIK3CD-AS1Q5SR53 167 aa18.04■□□□□ 0.48
CPSF6-205ENST00000550075 DERL1Q9BUN8 251 aa18.04■□□□□ 0.48
CPSF6-205ENST00000550075 MED9Q9NWA0 146 aa18.04■□□□□ 0.48
CPSF6-205ENST00000550075 A0A096LPF7 62 aa18.03■□□□□ 0.48
CPSF6-205ENST00000550075 CENPWQ5EE01 88 aa18.03■□□□□ 0.48
CPSF6-205ENST00000550075 PRR27Q6MZM9 219 aa18.03■□□□□ 0.48
CPSF6-205ENST00000550075 SYT8Q8NBV8 401 aa18.03■□□□□ 0.48
CPSF6-205ENST00000550075 TMSB15BA0A087X1C1 80 aa18.02■□□□□ 0.48
CPSF6-205ENST00000550075 PGPEP1LA6NFU8 196 aa18.02■□□□□ 0.48
CPSF6-205ENST00000550075 RS1O15537 224 aa18.02■□□□□ 0.48
CPSF6-205ENST00000550075 MRPL23Q16540 153 aaKnown RBP18.02■□□□□ 0.48
CPSF6-205ENST00000550075 SMIM12Q96EX1 92 aa18.02■□□□□ 0.48
CPSF6-205ENST00000550075 LINC00588Q9Y4M8 146 aa18.02■□□□□ 0.48
CPSF6-205ENST00000550075 GRIFINA4D1Z8 144 aa18.01■□□□□ 0.47
CPSF6-205ENST00000550075 GNG4P50150 75 aa18.01■□□□□ 0.47
CPSF6-205ENST00000550075 CFAP126Q5VTH2 177 aa18.01■□□□□ 0.47
CPSF6-205ENST00000550075 IGLV2-18A0A075B6J9 118 aa18■□□□□ 0.47
CPSF6-205ENST00000550075 A8MWV9 139 aa18■□□□□ 0.47
CPSF6-205ENST00000550075 ARMS2P0C7Q2 107 aa18■□□□□ 0.47
CPSF6-205ENST00000550075 CXCL1P09341 107 aa17.99■□□□□ 0.47
CPSF6-205ENST00000550075 LYPD6BQ8NI32 183 aa17.99■□□□□ 0.47
CPSF6-205ENST00000550075 PHLDA3Q9Y5J5 127 aa17.99■□□□□ 0.47
CPSF6-205ENST00000550075 MGST1P10620 155 aaKnown RBP17.98■□□□□ 0.47
CPSF6-205ENST00000550075 GATA1P15976 413 aaPredicted RBP17.98■□□□□ 0.47
CPSF6-205ENST00000550075 SRIP30626 198 aa17.98■□□□□ 0.47
CPSF6-205ENST00000550075 ZNRF2Q8NHG8 242 aa17.98■□□□□ 0.47
CPSF6-205ENST00000550075 BIN3Q9NQY0 253 aa17.98■□□□□ 0.47
CPSF6-205ENST00000550075 MRPS16Q9Y3D3 137 aaKnown RBP17.98■□□□□ 0.47
CPSF6-205ENST00000550075 M0R2N4 97 aa17.97■□□□□ 0.47
CPSF6-205ENST00000550075 MED14OSP0DP75 135 aa17.97■□□□□ 0.47
CPSF6-205ENST00000550075 GYPEP15421 78 aa17.97■□□□□ 0.47
CPSF6-205ENST00000550075 ESRGQ1W209 222 aa17.97■□□□□ 0.47
CPSF6-205ENST00000550075 DAZAP1Q96EP5 407 aaKnown RBP17.97■□□□□ 0.47
CPSF6-205ENST00000550075 RAB19A4D1S5 217 aa17.96■□□□□ 0.47
CPSF6-205ENST00000550075 RBFOX3A6NFN3 312 aa17.96■□□□□ 0.47
CPSF6-205ENST00000550075 NEGR1Q7Z3B1 354 aa17.96■□□□□ 0.47
CPSF6-205ENST00000550075 ZFP82Q8N141 532 aa17.96■□□□□ 0.47
CPSF6-205ENST00000550075 UPK3BQ9BT76 320 aa17.96■□□□□ 0.47
CPSF6-205ENST00000550075 TMEM250H0YL14 139 aa17.95■□□□□ 0.46
CPSF6-205ENST00000550075 K7EQD1 137 aa17.95■□□□□ 0.46
CPSF6-205ENST00000550075 ZFP2Q6ZN57 461 aa17.95■□□□□ 0.46
CPSF6-205ENST00000550075 PRADC1Q9BSG0 188 aa17.95■□□□□ 0.46
CPSF6-205ENST00000550075 SCRT2Q9NQ03 307 aa17.95■□□□□ 0.46
CPSF6-205ENST00000550075 RHODO00212 210 aa17.94■□□□□ 0.46
CPSF6-205ENST00000550075 RPL19P84098 196 aaKnown RBP17.94■□□□□ 0.46
CPSF6-205ENST00000550075 RHOHQ15669 191 aa17.94■□□□□ 0.46
CPSF6-205ENST00000550075 SH2D6Q7Z4S9 175 aa17.94■□□□□ 0.46
CPSF6-205ENST00000550075 PARLQ9H300 379 aa17.94■□□□□ 0.46
CPSF6-205ENST00000550075 IGHV3-73A0A0B4J1V6 119 aa17.93■□□□□ 0.46
CPSF6-205ENST00000550075 TRBV6-4A0A1B0GX49 114 aa17.93■□□□□ 0.46
CPSF6-205ENST00000550075 Q6ZR54 194 aa17.93■□□□□ 0.46
CPSF6-205ENST00000550075 M0R381 172 aa17.92■□□□□ 0.46
CPSF6-205ENST00000550075 IGLV2-8P01709 118 aa17.92■□□□□ 0.46
CPSF6-205ENST00000550075 TTC32Q5I0X7 151 aa17.92■□□□□ 0.46
CPSF6-205ENST00000550075 TOR2AQ5JU69 321 aa17.92■□□□□ 0.46
CPSF6-205ENST00000550075 DMRTA1Q5VZB9 504 aa17.92■□□□□ 0.46
CPSF6-205ENST00000550075 TRBV20OR9-2A0A075B6H5 130 aa17.91■□□□□ 0.46
CPSF6-205ENST00000550075 NBDYA0A0U1RRE5 68 aa17.91■□□□□ 0.46
CPSF6-205ENST00000550075 RPS20P60866 119 aaKnown RBP17.91■□□□□ 0.46
CPSF6-205ENST00000550075 SOHLH1Q5JUK2 328 aa17.91■□□□□ 0.46
CPSF6-205ENST00000550075 SLC25A29Q8N8R3 303 aa17.91■□□□□ 0.46
CPSF6-205ENST00000550075 EIF5A2Q9GZV4 153 aaKnown RBP17.91■□□□□ 0.46
CPSF6-205ENST00000550075 Q9H8V8 135 aa17.91■□□□□ 0.46
CPSF6-205ENST00000550075 ZNF575Q86XF7 245 aa17.9■□□□□ 0.46
CPSF6-205ENST00000550075 XKRY2A2RUG3 117 aa17.89■□□□□ 0.45
CPSF6-205ENST00000550075 P01737 135 aa17.89■□□□□ 0.45
CPSF6-205ENST00000550075 LINC00336Q6ZUF6 198 aa17.89■□□□□ 0.45
CPSF6-205ENST00000550075 OR2D3Q8NGH3 330 aa17.89■□□□□ 0.45
CPSF6-205ENST00000550075 FAM210AQ96ND0 272 aa17.89■□□□□ 0.45
CPSF6-205ENST00000550075 SNAI2O43623 268 aa17.88■□□□□ 0.45
CPSF6-205ENST00000550075 NDUFS6O75380 124 aaKnown RBP17.88■□□□□ 0.45
CPSF6-205ENST00000550075 OR5AL1P0C617 328 aa17.88■□□□□ 0.45
CPSF6-205ENST00000550075 TEX261Q6UWH6 196 aa17.88■□□□□ 0.45
CPSF6-205ENST00000550075 SFRP2Q96HF1 295 aa17.88■□□□□ 0.45
CPSF6-205ENST00000550075 DNAH10Q8IVF4 4471 aa17.88■□□□□ 0.45
CPSF6-205ENST00000550075 LOC100131303A0A0U1RQF7 123 aa17.87■□□□□ 0.45
CPSF6-205ENST00000550075 C19orf71A6NCJ1 209 aa17.87■□□□□ 0.45
CPSF6-205ENST00000550075 FAM74A4Q5TZK3 123 aa17.87■□□□□ 0.45
CPSF6-205ENST00000550075 LYPD5Q6UWN5 251 aa17.87■□□□□ 0.45
CPSF6-205ENST00000550075 JPT2Q9H910 190 aa17.87■□□□□ 0.45
CPSF6-205ENST00000550075 NXPH4O95158 308 aa17.86■□□□□ 0.45
CPSF6-205ENST00000550075 CEBPGP53567 150 aa17.86■□□□□ 0.45
CPSF6-205ENST00000550075 SPANXN1Q5VSR9 72 aa17.86■□□□□ 0.45
CPSF6-205ENST00000550075 OR10AG1Q8NH19 301 aa17.86■□□□□ 0.45
CPSF6-205ENST00000550075 SSBP4Q9BWG4 385 aaPredicted RBP17.86■□□□□ 0.45
CPSF6-205ENST00000550075 C1orf134Q5TEV5 83 aa17.85■□□□□ 0.45
CPSF6-205ENST00000550075 UFSP1Q6NVU6 142 aa17.85■□□□□ 0.45
CPSF6-205ENST00000550075 SIVA1O15304 175 aa17.84■□□□□ 0.45
CPSF6-205ENST00000550075 SAMD10Q9BYL1 202 aa17.84■□□□□ 0.45
CPSF6-205ENST00000550075 A0A1W2PPQ1 181 aa17.83■□□□□ 0.44
CPSF6-205ENST00000550075 TIRAPP58753 221 aa17.83■□□□□ 0.44
CPSF6-205ENST00000550075 FER1L6-AS1Q8NA97 138 aa17.83■□□□□ 0.44
CPSF6-205ENST00000550075 A0A087WWL8 130 aa17.82■□□□□ 0.44
CPSF6-205ENST00000550075 TPPP3Q9BW30 176 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms