RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 CTTNBP2Q8WZ74 1663 aa1.2□□□□□ -2.22
SNRPF-202ENST00000549580 TRBV30A0A0K0K1B3 111 aa1.19□□□□□ -2.22
SNRPF-202ENST00000549580 CCDC179H3BU77 68 aa1.19□□□□□ -2.22
SNRPF-202ENST00000549580 K7EP13 123 aa1.19□□□□□ -2.22
SNRPF-202ENST00000549580 APOC1P02654 83 aa1.19□□□□□ -2.22
SNRPF-202ENST00000549580 CCKP06307 115 aa1.19□□□□□ -2.22
SNRPF-202ENST00000549580 ROS1P08922 2347 aa1.19□□□□□ -2.22
SNRPF-202ENST00000549580 PRB4P10163 310 aaPredicted RBP1.19□□□□□ -2.22
SNRPF-202ENST00000549580 MIC13Q5XKP0 118 aa1.19□□□□□ -2.22
SNRPF-202ENST00000549580 Q6ZUT4 128 aa1.19□□□□□ -2.22
SNRPF-202ENST00000549580 VSTM2AQ8TAG5 236 aa1.19□□□□□ -2.22
SNRPF-202ENST00000549580 ARL11Q969Q4 196 aa1.19□□□□□ -2.22
SNRPF-202ENST00000549580 CCDC167Q9P0B6 97 aa1.19□□□□□ -2.22
SNRPF-202ENST00000549580 CXorf51AA0A1B0GTR3 108 aa1.18□□□□□ -2.22
SNRPF-202ENST00000549580 SLC25A6P12236 298 aa1.18□□□□□ -2.22
SNRPF-202ENST00000549580 CAV3P56539 151 aa1.18□□□□□ -2.22
SNRPF-202ENST00000549580 DEFB132Q7Z7B7 95 aa1.18□□□□□ -2.22
SNRPF-202ENST00000549580 Q86TA4 180 aa1.18□□□□□ -2.22
SNRPF-202ENST00000549580 KCNRGQ8N5I3 272 aa1.18□□□□□ -2.22
SNRPF-202ENST00000549580 C1orf54Q8WWF1 131 aa1.18□□□□□ -2.22
SNRPF-202ENST00000549580 CCL19Q99731 98 aa1.18□□□□□ -2.22
SNRPF-202ENST00000549580 LINC00470Q9BZP3 86 aa1.18□□□□□ -2.22
SNRPF-202ENST00000549580 MYH6P13533 1939 aa1.18□□□□□ -2.22
SNRPF-202ENST00000549580 KMT2BQ9UMN6 2715 aaPredicted RBP1.17□□□□□ -2.22
SNRPF-202ENST00000549580 LOC101927531A0A1B0GV80 90 aa1.17□□□□□ -2.22
SNRPF-202ENST00000549580 FAM25AB3EWG3 89 aa1.17□□□□□ -2.22
SNRPF-202ENST00000549580 FAM25CB3EWG5 89 aa1.17□□□□□ -2.22
SNRPF-202ENST00000549580 FAM25GB3EWG6 89 aa1.17□□□□□ -2.22
SNRPF-202ENST00000549580 SPCS2Q15005 226 aa1.17□□□□□ -2.22
SNRPF-202ENST00000549580 LINC01545Q5VT33 79 aa1.17□□□□□ -2.22
SNRPF-202ENST00000549580 Q6ZS92 163 aa1.17□□□□□ -2.22
SNRPF-202ENST00000549580 SDF2Q99470 211 aa1.17□□□□□ -2.22
SNRPF-202ENST00000549580 CASZ1Q86V15 1759 aa1.16□□□□□ -2.22
SNRPF-202ENST00000549580 A0A1W2PPM0 123 aa1.16□□□□□ -2.22
SNRPF-202ENST00000549580 EMX2Q04743 252 aa1.16□□□□□ -2.22
SNRPF-202ENST00000549580 FXYD3Q14802 87 aa1.16□□□□□ -2.22
SNRPF-202ENST00000549580 SPANXN1Q5VSR9 72 aa1.16□□□□□ -2.22
SNRPF-202ENST00000549580 RPL13AP3Q6NVV1 102 aa1.16□□□□□ -2.22
SNRPF-202ENST00000549580 NDUFA11Q86Y39 141 aa1.16□□□□□ -2.22
SNRPF-202ENST00000549580 ATG2AQ2TAZ0 1938 aa1.16□□□□□ -2.22
SNRPF-202ENST00000549580 CITO14578 2027 aa1.16□□□□□ -2.22
SNRPF-202ENST00000549580 GRIN2AQ12879 1464 aa1.16□□□□□ -2.22
SNRPF-202ENST00000549580 CDK12Q9NYV4 1490 aaPredicted RBP1.16□□□□□ -2.22
SNRPF-202ENST00000549580 TENM1Q9UKZ4 2725 aa1.15□□□□□ -2.23
SNRPF-202ENST00000549580 NBDYA0A0U1RRE5 68 aa1.15□□□□□ -2.23
SNRPF-202ENST00000549580 GNG7O60262 68 aa1.15□□□□□ -2.23
SNRPF-202ENST00000549580 PITX3O75364 302 aa1.15□□□□□ -2.23
SNRPF-202ENST00000549580 TFF1P04155 84 aa1.15□□□□□ -2.23
SNRPF-202ENST00000549580 Q8N6K4 173 aa1.15□□□□□ -2.23
SNRPF-202ENST00000549580 IBTKQ9P2D0 1353 aaPredicted RBP1.15□□□□□ -2.23
SNRPF-202ENST00000549580 ADGRB1O14514 1584 aa1.15□□□□□ -2.23
SNRPF-202ENST00000549580 ASCC3Q8N3C0 2202 aaKnown RBP1.15□□□□□ -2.23
SNRPF-202ENST00000549580 PLXNA2O75051 1894 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 TMEM2Q9UHN6 1383 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 TEX49A0A1B0GTD5 131 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 FAM92AA1XBS5 289 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 PIRTP0C851 137 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 OR2T2Q6IF00 324 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 C5orf56Q8N8D9 126 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 DPH3Q96FX2 82 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 LINC00208Q96KT6 92 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 TMEM242Q9NWH2 141 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 NDUFA12Q9UI09 145 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 MED12Q93074 2177 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 MYOM3Q5VTT5 1437 aa1.14□□□□□ -2.23
SNRPF-202ENST00000549580 TRAV12-2A0A075B6T6 113 aa1.13□□□□□ -2.23
SNRPF-202ENST00000549580 FXYD1O00168 92 aa1.13□□□□□ -2.23
SNRPF-202ENST00000549580 IL5P05113 134 aa1.13□□□□□ -2.23
SNRPF-202ENST00000549580 PIPP12273 146 aaPredicted RBP1.13□□□□□ -2.23
SNRPF-202ENST00000549580 C10orf99Q6UWK7 81 aa1.13□□□□□ -2.23
SNRPF-202ENST00000549580 SPTSSAQ969W0 71 aa1.13□□□□□ -2.23
SNRPF-202ENST00000549580 TCRBV3S1A0A5B6 114 aa1.12□□□□□ -2.23
SNRPF-202ENST00000549580 A6NIN4 97 aa1.12□□□□□ -2.23
SNRPF-202ENST00000549580 RPL7L1Q6DKI1 246 aaKnown RBP1.12□□□□□ -2.23
SNRPF-202ENST00000549580 TSKUQ8WUA8 353 aa1.12□□□□□ -2.23
SNRPF-202ENST00000549580 PPP1R1CQ8WVI7 109 aa1.12□□□□□ -2.23
SNRPF-202ENST00000549580 COPS9Q8WXC6 57 aa1.12□□□□□ -2.23
SNRPF-202ENST00000549580 IFI27L1Q96BM0 104 aa1.12□□□□□ -2.23
SNRPF-202ENST00000549580 TMEM141Q96I45 108 aa1.12□□□□□ -2.23
SNRPF-202ENST00000549580 LAMA4Q16363 1823 aa1.12□□□□□ -2.23
SNRPF-202ENST00000549580 KIF13AQ9H1H9 1805 aa1.12□□□□□ -2.23
SNRPF-202ENST00000549580 DLEC1Q9Y238 1755 aa1.11□□□□□ -2.23
SNRPF-202ENST00000549580 SNCGO76070 127 aa1.11□□□□□ -2.23
SNRPF-202ENST00000549580 NDUFB6O95139 128 aa1.11□□□□□ -2.23
SNRPF-202ENST00000549580 SPTBP11277 2137 aa1.11□□□□□ -2.23
SNRPF-202ENST00000549580 ZNF56Q15929 161 aa1.11□□□□□ -2.23
SNRPF-202ENST00000549580 SLC48A1Q6P1K1 146 aa1.11□□□□□ -2.23
SNRPF-202ENST00000549580 PDCD10Q9BUL8 212 aa1.11□□□□□ -2.23
SNRPF-202ENST00000549580 CNTRLQ7Z7A1 2325 aa1.11□□□□□ -2.23
SNRPF-202ENST00000549580 PTPRMP28827 1452 aa1.11□□□□□ -2.23
SNRPF-202ENST00000549580 RREB1Q92766 1687 aa1.1□□□□□ -2.23
SNRPF-202ENST00000549580 BLMP54132 1417 aaPredicted RBP1.1□□□□□ -2.23
SNRPF-202ENST00000549580 KLKP1Q107X0 134 aa1.1□□□□□ -2.23
SNRPF-202ENST00000549580 CYP2G1PQ6ZSU1 146 aa1.1□□□□□ -2.23
SNRPF-202ENST00000549580 COA4Q9NYJ1 87 aa1.1□□□□□ -2.23
SNRPF-202ENST00000549580 AFDNP55196 1824 aaKnown RBP1.1□□□□□ -2.23
SNRPF-202ENST00000549580 NAIPQ13075 1403 aa1.09□□□□□ -2.23
SNRPF-202ENST00000549580 TRAV12-3A0A0B4J271 114 aa1.09□□□□□ -2.23
SNRPF-202ENST00000549580 APODP05090 189 aa1.09□□□□□ -2.23
SNRPF-202ENST00000549580 HIST1H1DP16402 221 aaKnown RBP1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 2344.8 ms