RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 BAGE2Q86Y30 109 aa10.94□□□□□ -0.66
CHMP1A-206ENST00000549139 LYPD6BQ8NI32 183 aa10.94□□□□□ -0.66
CHMP1A-206ENST00000549139 C9orf85Q96MD7 179 aa10.94□□□□□ -0.66
CHMP1A-206ENST00000549139 MLST8Q9BVC4 326 aa10.94□□□□□ -0.66
CHMP1A-206ENST00000549139 A0A0J9YY99 117 aa10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 C16orf90A8MZG2 172 aa10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 PDE6DO43924 150 aa10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 SH2D1AO60880 128 aa10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 ORM1P02763 201 aa10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 BCL2P10415 239 aa10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 RNASE3P12724 160 aaKnown RBP10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 DNLZQ5SXM8 178 aa10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 C1orf134Q5TEV5 83 aa10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 Q8N1X5 172 aa10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 PTH2Q96A98 100 aa10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 VAX2Q9UIW0 290 aa10.93□□□□□ -0.66
CHMP1A-206ENST00000549139 TRAV4A0A0B4J268 109 aa10.92□□□□□ -0.66
CHMP1A-206ENST00000549139 B4DEV8 164 aa10.92□□□□□ -0.66
CHMP1A-206ENST00000549139 KRBOX1C9JBD0 128 aa10.92□□□□□ -0.66
CHMP1A-206ENST00000549139 IGHV3-53P01767 116 aa10.92□□□□□ -0.66
CHMP1A-206ENST00000549139 RPL35P42766 123 aaKnown RBP10.92□□□□□ -0.66
CHMP1A-206ENST00000549139 FHL2Q14192 279 aa10.92□□□□□ -0.66
CHMP1A-206ENST00000549139 VSIG2Q96IQ7 327 aa10.92□□□□□ -0.66
CHMP1A-206ENST00000549139 PRO0255Q9UI72 69 aa10.92□□□□□ -0.66
CHMP1A-206ENST00000549139 S100A4P26447 101 aaKnown RBP10.91□□□□□ -0.66
CHMP1A-206ENST00000549139 ASIPP42127 132 aa10.91□□□□□ -0.66
CHMP1A-206ENST00000549139 TNP2Q05952 138 aa10.91□□□□□ -0.66
CHMP1A-206ENST00000549139 LINC01559Q495D7 138 aa10.91□□□□□ -0.66
CHMP1A-206ENST00000549139 ZNF876PQ49A33 203 aa10.91□□□□□ -0.66
CHMP1A-206ENST00000549139 UBE2DNLQ8IWF7 75 aa10.91□□□□□ -0.66
CHMP1A-206ENST00000549139 NHLRC2Q8NBF2 726 aa10.91□□□□□ -0.66
CHMP1A-206ENST00000549139 ZNF479Q96JC4 524 aa10.91□□□□□ -0.66
CHMP1A-206ENST00000549139 HHLA3Q9XRX5 114 aa10.91□□□□□ -0.66
CHMP1A-206ENST00000549139 TRGV4A0A0C4DH28 118 aa10.9□□□□□ -0.66
CHMP1A-206ENST00000549139 CIDEAO60543 219 aa10.9□□□□□ -0.66
CHMP1A-206ENST00000549139 SFTA3P0C7M3 94 aa10.9□□□□□ -0.66
CHMP1A-206ENST00000549139 CRYBA4P53673 196 aa10.9□□□□□ -0.66
CHMP1A-206ENST00000549139 FAM3BP58499 235 aaPredicted RBP10.9□□□□□ -0.66
CHMP1A-206ENST00000549139 OR4C5Q8NGB2 326 aa10.9□□□□□ -0.66
CHMP1A-206ENST00000549139 DERL1Q9BUN8 251 aa10.9□□□□□ -0.66
CHMP1A-206ENST00000549139 IL36BQ9NZH7 164 aa10.9□□□□□ -0.66
CHMP1A-206ENST00000549139 PGPEP1LA6NFU8 196 aa10.89□□□□□ -0.67
CHMP1A-206ENST00000549139 C9JCJ5 164 aa10.89□□□□□ -0.67
CHMP1A-206ENST00000549139 M0R036 132 aa10.89□□□□□ -0.67
CHMP1A-206ENST00000549139 PAX4O43316 350 aa10.89□□□□□ -0.67
CHMP1A-206ENST00000549139 CCL18P55774 89 aa10.89□□□□□ -0.67
CHMP1A-206ENST00000549139 PIK3CD-AS1Q5SR53 167 aa10.89□□□□□ -0.67
CHMP1A-206ENST00000549139 MED9Q9NWA0 146 aa10.89□□□□□ -0.67
CHMP1A-206ENST00000549139 RBFOX3A6NFN3 312 aa10.88□□□□□ -0.67
CHMP1A-206ENST00000549139 RS1O15537 224 aa10.88□□□□□ -0.67
CHMP1A-206ENST00000549139 ZNF506Q5JVG8 444 aa10.88□□□□□ -0.67
CHMP1A-206ENST00000549139 SMIM12Q96EX1 92 aa10.88□□□□□ -0.67
CHMP1A-206ENST00000549139 A0A096LPF7 62 aa10.87□□□□□ -0.67
CHMP1A-206ENST00000549139 RAB19A4D1S5 217 aa10.87□□□□□ -0.67
CHMP1A-206ENST00000549139 IGLV2-8P01709 118 aa10.87□□□□□ -0.67
CHMP1A-206ENST00000549139 ARMS2P0C7Q2 107 aa10.87□□□□□ -0.67
CHMP1A-206ENST00000549139 CENPWQ5EE01 88 aa10.87□□□□□ -0.67
CHMP1A-206ENST00000549139 SCRT2Q9NQ03 307 aa10.87□□□□□ -0.67
CHMP1A-206ENST00000549139 FAT1Q14517 4588 aa10.87□□□□□ -0.67
CHMP1A-206ENST00000549139 GRIFINA4D1Z8 144 aa10.86□□□□□ -0.67
CHMP1A-206ENST00000549139 H3BVH4 76 aa10.86□□□□□ -0.67
CHMP1A-206ENST00000549139 CXCL1P09341 107 aa10.86□□□□□ -0.67
CHMP1A-206ENST00000549139 GNG4P50150 75 aa10.86□□□□□ -0.67
CHMP1A-206ENST00000549139 CFAP126Q5VTH2 177 aa10.86□□□□□ -0.67
CHMP1A-206ENST00000549139 LINC00588Q9Y4M8 146 aa10.86□□□□□ -0.67
CHMP1A-206ENST00000549139 ICOSQ9Y6W8 199 aa10.86□□□□□ -0.67
CHMP1A-206ENST00000549139 TMSB15BA0A087X1C1 80 aa10.85□□□□□ -0.67
CHMP1A-206ENST00000549139 MRPL23Q16540 153 aaKnown RBP10.85□□□□□ -0.67
CHMP1A-206ENST00000549139 ESRGQ1W209 222 aa10.85□□□□□ -0.67
CHMP1A-206ENST00000549139 PRR27Q6MZM9 219 aa10.85□□□□□ -0.67
CHMP1A-206ENST00000549139 TEX261Q6UWH6 196 aa10.85□□□□□ -0.67
CHMP1A-206ENST00000549139 A8MWV9 139 aa10.84□□□□□ -0.67
CHMP1A-206ENST00000549139 TMEM250H0YL14 139 aa10.84□□□□□ -0.67
CHMP1A-206ENST00000549139 NDUFS6O75380 124 aaKnown RBP10.84□□□□□ -0.67
CHMP1A-206ENST00000549139 GATA1P15976 413 aaPredicted RBP10.84□□□□□ -0.67
CHMP1A-206ENST00000549139 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
CHMP1A-206ENST00000549139 SYT8Q8NBV8 401 aa10.84□□□□□ -0.67
CHMP1A-206ENST00000549139 BIN3Q9NQY0 253 aa10.84□□□□□ -0.67
CHMP1A-206ENST00000549139 TRBV20OR9-2A0A075B6H5 130 aa10.83□□□□□ -0.68
CHMP1A-206ENST00000549139 MGST1P10620 155 aaKnown RBP10.83□□□□□ -0.68
CHMP1A-206ENST00000549139 RPL19P84098 196 aaKnown RBP10.83□□□□□ -0.68
CHMP1A-206ENST00000549139 ZNRF2Q8NHG8 242 aa10.83□□□□□ -0.68
CHMP1A-206ENST00000549139 DAZAP1Q96EP5 407 aaKnown RBP10.83□□□□□ -0.68
CHMP1A-206ENST00000549139 FAM210AQ96ND0 272 aa10.83□□□□□ -0.68
CHMP1A-206ENST00000549139 PHLDA3Q9Y5J5 127 aa10.83□□□□□ -0.68
CHMP1A-206ENST00000549139 MYCBP2O75592 4640 aa10.83□□□□□ -0.68
CHMP1A-206ENST00000549139 C19orf71A6NCJ1 209 aa10.82□□□□□ -0.68
CHMP1A-206ENST00000549139 K7EQD1 137 aa10.82□□□□□ -0.68
CHMP1A-206ENST00000549139 ZFP2Q6ZN57 461 aa10.82□□□□□ -0.68
CHMP1A-206ENST00000549139 NEGR1Q7Z3B1 354 aa10.82□□□□□ -0.68
CHMP1A-206ENST00000549139 UPK3BQ9BT76 320 aa10.82□□□□□ -0.68
CHMP1A-206ENST00000549139 SSBP4Q9BWG4 385 aaPredicted RBP10.82□□□□□ -0.68
CHMP1A-206ENST00000549139 EIF5A2Q9GZV4 153 aaKnown RBP10.82□□□□□ -0.68
CHMP1A-206ENST00000549139 PARLQ9H300 379 aa10.82□□□□□ -0.68
CHMP1A-206ENST00000549139 FLG2Q5D862 2391 aaPredicted RBP10.82□□□□□ -0.68
CHMP1A-206ENST00000549139 SRRM2Q9UQ35 2752 aaKnown RBP10.82□□□□□ -0.68
CHMP1A-206ENST00000549139 TRBV6-4A0A1B0GX49 114 aa10.81□□□□□ -0.68
CHMP1A-206ENST00000549139 SNAI2O43623 268 aa10.81□□□□□ -0.68
CHMP1A-206ENST00000549139 GYPEP15421 78 aa10.81□□□□□ -0.68
CHMP1A-206ENST00000549139 TOR2AQ5JU69 321 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms