RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CXCL1P09341 107 aa8.63□□□□□ -1.03
HDAC7-226ENST00000547259 TCL1AP56279 114 aa8.63□□□□□ -1.03
HDAC7-226ENST00000547259 C11orf72Q8NBR9 251 aa8.63□□□□□ -1.03
HDAC7-226ENST00000547259 GSN-AS1Q9NRJ2 163 aa8.63□□□□□ -1.03
HDAC7-226ENST00000547259 PLAC8L1A1L4L8 177 aa8.62□□□□□ -1.03
HDAC7-226ENST00000547259 APOC3P02656 99 aa8.62□□□□□ -1.03
HDAC7-226ENST00000547259 GZMBP10144 247 aa8.62□□□□□ -1.03
HDAC7-226ENST00000547259 MDFICQ9P1T7 246 aa8.62□□□□□ -1.03
HDAC7-226ENST00000547259 DNAH10Q8IVF4 4471 aa8.61□□□□□ -1.03
HDAC7-226ENST00000547259 PPP1R2P9O14990 202 aa8.61□□□□□ -1.03
HDAC7-226ENST00000547259 MT-ND4LP03901 98 aa8.61□□□□□ -1.03
HDAC7-226ENST00000547259 RNF212Q495C1 297 aa8.61□□□□□ -1.03
HDAC7-226ENST00000547259 CT83Q5H943 113 aa8.61□□□□□ -1.03
HDAC7-226ENST00000547259 DNLZQ5SXM8 178 aa8.61□□□□□ -1.03
HDAC7-226ENST00000547259 SPXQ9BT56 116 aa8.61□□□□□ -1.03
HDAC7-226ENST00000547259 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
HDAC7-226ENST00000547259 NOP10Q9NPE3 64 aaKnown RBP8.61□□□□□ -1.03
HDAC7-226ENST00000547259 V9GYV3 84 aa8.61□□□□□ -1.03
HDAC7-226ENST00000547259 HECTD4Q9Y4D8 3996 aa8.61□□□□□ -1.03
HDAC7-226ENST00000547259 A8MWL6 223 aa8.6□□□□□ -1.03
HDAC7-226ENST00000547259 ARMS2P0C7Q2 107 aa8.6□□□□□ -1.03
HDAC7-226ENST00000547259 MED14OSP0DP75 135 aa8.6□□□□□ -1.03
HDAC7-226ENST00000547259 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
HDAC7-226ENST00000547259 SVBPQ8N300 66 aa8.6□□□□□ -1.03
HDAC7-226ENST00000547259 FER1L6-AS1Q8NA97 138 aa8.6□□□□□ -1.03
HDAC7-226ENST00000547259 ANAPC16Q96DE5 110 aa8.6□□□□□ -1.03
HDAC7-226ENST00000547259 C9orf85Q96MD7 179 aa8.6□□□□□ -1.03
HDAC7-226ENST00000547259 TPPP3Q9BW30 176 aa8.6□□□□□ -1.03
HDAC7-226ENST00000547259 IL36BQ9NZH7 164 aa8.6□□□□□ -1.03
HDAC7-226ENST00000547259 TEX48A0A1B0GUV7 120 aa8.59□□□□□ -1.03
HDAC7-226ENST00000547259 LYRM9A8MSI8 78 aa8.59□□□□□ -1.03
HDAC7-226ENST00000547259 SNAPINO95295 136 aa8.59□□□□□ -1.03
HDAC7-226ENST00000547259 NANOS2P60321 138 aaKnown RBP8.59□□□□□ -1.03
HDAC7-226ENST00000547259 DAZ2Q13117 558 aaKnown RBP8.59□□□□□ -1.03
HDAC7-226ENST00000547259 FAM222AQ5U5X8 452 aa8.59□□□□□ -1.03
HDAC7-226ENST00000547259 LINC00336Q6ZUF6 198 aa8.59□□□□□ -1.03
HDAC7-226ENST00000547259 CLRN3Q8NCR9 226 aa8.59□□□□□ -1.03
HDAC7-226ENST00000547259 TSKUQ8WUA8 353 aa8.59□□□□□ -1.03
HDAC7-226ENST00000547259 MRPL16Q9NX20 251 aaKnown RBP8.59□□□□□ -1.03
HDAC7-226ENST00000547259 CELA1Q9UNI1 258 aa8.59□□□□□ -1.03
HDAC7-226ENST00000547259 PHLDA3Q9Y5J5 127 aa8.59□□□□□ -1.03
HDAC7-226ENST00000547259 DNAH6Q9C0G6 4158 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 TRGV1A0A0A0MS02 117 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 A0A1W2PPQ1 181 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 M0R2P5 195 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 SNAI2O43623 268 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 OR5AL1P0C617 328 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 IGLC6P0CF74 106 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 SPART-AS1P0CW21 52 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 RHEBQ15382 184 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 ZNF575Q86XF7 245 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 GFRA4Q9GZZ7 299 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 DKK2Q9UBU2 259 aa8.58□□□□□ -1.04
HDAC7-226ENST00000547259 MUC4Q99102 2169 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 GAGE12BA1L429 117 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 C7orf77A4D0Y5 90 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 IGLL5B9A064 214 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 SPINK4O60575 86 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 GAGE7O76087 117 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 GAGE12FP0CL80 117 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 GAGE12GP0CL81 117 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 GAGE12IP0CL82 117 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 SPANXN1Q5VSR9 72 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 LYZL1Q6UWQ5 148 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 Q6ZTI0 123 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 ZFP82Q8N141 532 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 SYT8Q8NBV8 401 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 OR10AG1Q8NH19 301 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 GTSF1Q8WW33 167 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 CTDSP1Q9GZU7 261 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 SCRT2Q9NQ03 307 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 RPS10P5Q9NQ39 176 aa8.57□□□□□ -1.04
HDAC7-226ENST00000547259 HERC2O95714 4834 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 MUC21A0A0G2JKD1 596 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 MUC21A0A140T8X8 626 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 FAM231BA6NCW3 169 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 HIGD1CA8MV81 97 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 F2Z2F3 143 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 M0R381 172 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 DEFB130BP0DP73 79 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 DEFB130AP0DP74 79 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 CTRLP40313 264 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 SSTP61278 116 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 DAD1P61803 113 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 LGALS9BQ3B8N2 356 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 ZNF876PQ49A33 203 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 BORCS7Q96B45 105 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 PGLYRP4Q96LB8 373 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 SSBP4Q9BWG4 385 aaPredicted RBP8.56□□□□□ -1.04
HDAC7-226ENST00000547259 NAT8BQ9UHF3 227 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 VPS13DQ5THJ4 4388 aa8.56□□□□□ -1.04
HDAC7-226ENST00000547259 TRGV2A0A075B6R0 118 aa8.55□□□□□ -1.04
HDAC7-226ENST00000547259 TRAV10A0A0B4J240 114 aa8.55□□□□□ -1.04
HDAC7-226ENST00000547259 SMIM27A0A1W2PRY6 76 aa8.55□□□□□ -1.04
HDAC7-226ENST00000547259 CACNG7P62955 275 aa8.55□□□□□ -1.04
HDAC7-226ENST00000547259 PTH2Q96A98 100 aa8.55□□□□□ -1.04
HDAC7-226ENST00000547259 APLNQ9ULZ1 77 aa8.55□□□□□ -1.04
HDAC7-226ENST00000547259 A0A087WWC5 75 aa8.54□□□□□ -1.04
HDAC7-226ENST00000547259 LINC00612Q8N6U2 182 aa8.54□□□□□ -1.04
HDAC7-226ENST00000547259 NUP35Q8NFH5 326 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms