RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 MED14OSP0DP75 135 aa10.45□□□□□ -0.74
MSH2-206ENST00000543555 C18orf15Q96N68 181 aa10.45□□□□□ -0.74
MSH2-206ENST00000543555 ZNF702PQ9H963 129 aa10.45□□□□□ -0.74
MSH2-206ENST00000543555 CYSRT1A8MQ03 144 aa10.45□□□□□ -0.74
MSH2-206ENST00000543555 COX8AP10176 69 aa10.45□□□□□ -0.74
MSH2-206ENST00000543555 MRAP2Q96G30 205 aa10.45□□□□□ -0.74
MSH2-206ENST00000543555 KLLNB2CW77 178 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 LRRC75A-AS1Q8N1F1 130 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 MYOZ3Q8TDC0 251 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 PHLDA3Q9Y5J5 127 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 DLEU1O43261 78 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 HOXA3O43365 443 aaPredicted RBP10.44□□□□□ -0.74
MSH2-206ENST00000543555 SPRY2O43597 315 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 ELANEP08246 267 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 LGALS1P09382 135 aaKnown RBP10.44□□□□□ -0.74
MSH2-206ENST00000543555 TMEM158Q8WZ71 300 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 HIVEP2P31629 2446 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 JMJD1CQ15652 2540 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 GNRH2O43555 120 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 ANKRD39Q53RE8 183 aa10.44□□□□□ -0.74
MSH2-206ENST00000543555 DUX5Q96PT3 197 aa10.43□□□□□ -0.74
MSH2-206ENST00000543555 RNASE3P12724 160 aaKnown RBP10.43□□□□□ -0.74
MSH2-206ENST00000543555 GAGE1Q13065 139 aa10.43□□□□□ -0.74
MSH2-206ENST00000543555 MPV17L2Q567V2 206 aa10.43□□□□□ -0.74
MSH2-206ENST00000543555 OR1N2Q8NGR9 330 aa10.43□□□□□ -0.74
MSH2-206ENST00000543555 F8P00451 2351 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 SYNJ2BPP57105 145 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 DPH3P1Q9H4G8 78 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 MAST4O15021 2626 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 IGHV4OR15-8A0A075B7B6 117 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 A0A087WW49 117 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 CD5LO43866 347 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 UBE2E2Q96LR5 201 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 DKK2Q9UBU2 259 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 LGALS9O00182 355 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 NUDT3O95989 172 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 ZNF688P0C7X2 276 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 LAGE3Q14657 143 aa10.42□□□□□ -0.74
MSH2-206ENST00000543555 PSMG4Q5JS54 123 aa10.41□□□□□ -0.74
MSH2-206ENST00000543555 C14orf178Q8N769 122 aaPredicted RBP10.41□□□□□ -0.74
MSH2-206ENST00000543555 K7EQG2 157 aa10.41□□□□□ -0.74
MSH2-206ENST00000543555 RNF152Q8N8N0 203 aa10.41□□□□□ -0.74
MSH2-206ENST00000543555 SMIM17P0DL12 118 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 FGF6P10767 208 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 HOXD3P31249 432 aaPredicted RBP10.4□□□□□ -0.74
MSH2-206ENST00000543555 ODF1Q14990 250 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 BVES-AS1Q5T3Y7 98 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 FAM159AQ6UWV7 190 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 C12orf54Q6X4T0 127 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 C2orf91Q6ZV80 131 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 SMIM2Q9BVW6 85 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 FN1P02751 2386 aaKnown RBP10.4□□□□□ -0.74
MSH2-206ENST00000543555 NXPH4O95158 308 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 SNRPD3P62318 126 aaKnown RBP10.4□□□□□ -0.74
MSH2-206ENST00000543555 WFDC12Q8WWY7 111 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 RASL10AQ92737 203 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 AP1S3Q96PC3 154 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 ODF3Q96PU9 254 aa10.4□□□□□ -0.74
MSH2-206ENST00000543555 ATP5LO75964 103 aa10.39□□□□□ -0.75
MSH2-206ENST00000543555 PRSS1P07477 247 aa10.39□□□□□ -0.75
MSH2-206ENST00000543555 A0A0J9YX75 114 aa10.39□□□□□ -0.75
MSH2-206ENST00000543555 NPSP0C0P6 89 aa10.39□□□□□ -0.75
MSH2-206ENST00000543555 ZMAT4Q9H898 229 aa10.39□□□□□ -0.75
MSH2-206ENST00000543555 SUMO2P61956 95 aaKnown RBP10.39□□□□□ -0.75
MSH2-206ENST00000543555 TRAV12-3A0A0B4J271 114 aa10.38□□□□□ -0.75
MSH2-206ENST00000543555 C7orf71A4D174 169 aa10.38□□□□□ -0.75
MSH2-206ENST00000543555 MGPP08493 103 aa10.38□□□□□ -0.75
MSH2-206ENST00000543555 ORAOV1Q8WV07 137 aa10.38□□□□□ -0.75
MSH2-206ENST00000543555 FOXC2Q99958 501 aa10.38□□□□□ -0.75
MSH2-206ENST00000543555 C20orf78Q9BR46 151 aa10.38□□□□□ -0.75
MSH2-206ENST00000543555 Q6ZVH6 145 aa10.38□□□□□ -0.75
MSH2-206ENST00000543555 BOD1L2Q8IYS8 172 aa10.38□□□□□ -0.75
MSH2-206ENST00000543555 RPL39LQ96EH5 51 aaKnown RBP10.38□□□□□ -0.75
MSH2-206ENST00000543555 COX11Q9Y6N1 276 aa10.38□□□□□ -0.75
MSH2-206ENST00000543555 TCTAP57738 103 aa10.37□□□□□ -0.75
MSH2-206ENST00000543555 Q8N2B8 174 aa10.37□□□□□ -0.75
MSH2-206ENST00000543555 ANK3Q12955 4377 aaKnown RBP10.37□□□□□ -0.75
MSH2-206ENST00000543555 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
MSH2-206ENST00000543555 IGKV3-20P01619 116 aa10.36□□□□□ -0.75
MSH2-206ENST00000543555 CD7P09564 240 aa10.36□□□□□ -0.75
MSH2-206ENST00000543555 YAE1D1Q9NRH1 226 aa10.36□□□□□ -0.75
MSH2-206ENST00000543555 KIF25-AS1Q9Y6Z4 181 aa10.36□□□□□ -0.75
MSH2-206ENST00000543555 HHLA3Q9XRX5 114 aa10.36□□□□□ -0.75
MSH2-206ENST00000543555 IGKCP01834 107 aa10.36□□□□□ -0.75
MSH2-206ENST00000543555 ORMDL2Q53FV1 153 aa10.36□□□□□ -0.75
MSH2-206ENST00000543555 NMUP48645 174 aa10.35□□□□□ -0.75
MSH2-206ENST00000543555 K7EMI3 77 aa10.35□□□□□ -0.75
MSH2-206ENST00000543555 LINC00315P59091 139 aa10.35□□□□□ -0.75
MSH2-206ENST00000543555 TCTEX1D4Q5JR98 221 aa10.35□□□□□ -0.75
MSH2-206ENST00000543555 ADAMTSL5Q6ZMM2 481 aa10.35□□□□□ -0.75
MSH2-206ENST00000543555 C18orf65Q6ZTR6 163 aa10.35□□□□□ -0.75
MSH2-206ENST00000543555 TRAV12-2A0A075B6T6 113 aa10.34□□□□□ -0.75
MSH2-206ENST00000543555 DPM2O94777 84 aa10.34□□□□□ -0.75
MSH2-206ENST00000543555 PPP1R17O96001 155 aa10.34□□□□□ -0.75
MSH2-206ENST00000543555 CDKN1BP46527 198 aa10.34□□□□□ -0.75
MSH2-206ENST00000543555 NSD1Q96L73 2696 aaPredicted RBP10.34□□□□□ -0.75
MSH2-206ENST00000543555 SLURP1P55000 103 aa10.34□□□□□ -0.75
MSH2-206ENST00000543555 DEFB136Q30KP8 78 aa10.34□□□□□ -0.75
MSH2-206ENST00000543555 PCP2Q8IVA1 136 aa10.34□□□□□ -0.75
MSH2-206ENST00000543555 OR9G4Q8NGQ1 327 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms