RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 ZNF415Q09FC8 603 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 OR2D3Q8NGH3 330 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 TSKUQ8WUA8 353 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 ANAPC16Q96DE5 110 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 CNFNQ9BYD5 112 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 CTDSP1Q9GZU7 261 aa4.18□□□□□ -1.74
ABCF1-207ENST00000542772 RPP21Q9H633 154 aaKnown RBP4.18□□□□□ -1.74
ABCF1-207ENST00000542772 A0A087WWC5 75 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 TEX48A0A1B0GUV7 120 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 CXorf65A6NEN9 183 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 DEFB4AO15263 64 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 CIDEAO60543 219 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 MT-ND4LP03901 98 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 S100A4P26447 101 aaKnown RBP4.17□□□□□ -1.74
ABCF1-207ENST00000542772 ASIPP42127 132 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 ADIRFQ15847 76 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 C12orf74Q32Q52 190 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 RNF212Q495C1 297 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 FAM222AQ5U5X8 452 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 DMRTA1Q5VZB9 504 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 POM121L12Q8N7R1 296 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 C15orf54Q8N8G6 183 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 CLRN3Q8NCR9 226 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 GTSF1Q8WW33 167 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 IMMP2LQ96T52 175 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 NOP10Q9NPE3 64 aaKnown RBP4.17□□□□□ -1.74
ABCF1-207ENST00000542772 NAGKQ9UJ70 344 aa4.17□□□□□ -1.74
ABCF1-207ENST00000542772 TMA7Q9Y2S6 64 aaKnown RBP4.17□□□□□ -1.74
ABCF1-207ENST00000542772 TMSB15BA0A087X1C1 80 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 C7orf77A4D0Y5 90 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 RS1O15537 224 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 NXPH4O95158 308 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 GZMBP10144 247 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 NTF3P20783 257 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 ZNF876PQ49A33 203 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 LYZL1Q6UWQ5 148 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 Q6ZTI0 123 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 FER1L6-AS1Q8NA97 138 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 C11orf45Q8TAV5 145 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 CELA1Q9UNI1 258 aa4.16□□□□□ -1.74
ABCF1-207ENST00000542772 HIGD1CA8MV81 97 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 H3BVH4 76 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 SNAPINO95295 136 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 APOC3P02656 99 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 CRYGDP07320 174 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 CTRLP40313 264 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 EMP1P54849 157 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 LINC00315P59091 139 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 CACNG7P62955 275 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 RHEBQ15382 184 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 UFSP1Q6NVU6 142 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 ZFP2Q6ZN57 461 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 ZFP82Q8N141 532 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 SVBPQ8N300 66 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 NUP35Q8NFH5 326 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 OR10AG1Q8NH19 301 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 NAT8BQ9UHF3 227 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 PHLDA3Q9Y5J5 127 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 KIF25-AS1Q9Y6Z4 181 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 TGP01266 2768 aa4.15□□□□□ -1.75
ABCF1-207ENST00000542772 NACAE9PAV3 2078 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 TRGV1A0A0A0MS02 117 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 TRAV4A0A0B4J268 109 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 A0A1B0GUT8 65 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 GAGE12BA1L429 117 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 A8MWV9 139 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 GAGE7O76087 117 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 ATP5G1P05496 136 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 GAGE12FP0CL80 117 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 GAGE12GP0CL81 117 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 GAGE12IP0CL82 117 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 DAD1P61803 113 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 FHL2Q14192 279 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 CFAP126Q5VTH2 177 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.14□□□□□ -1.75
ABCF1-207ENST00000542772 GATD1Q8NB37 220 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 SYT8Q8NBV8 401 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 WWC2-AS2Q96NR7 200 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 MRPL16Q9NX20 251 aaKnown RBP4.14□□□□□ -1.75
ABCF1-207ENST00000542772 MSRB1Q9NZV6 116 aa4.14□□□□□ -1.75
ABCF1-207ENST00000542772 CSMD3Q7Z407 3707 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 DNAH7Q8WXX0 4024 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 TRAV9-1A0A075B6T8 112 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 TRAV10A0A0B4J240 114 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 A0A1B0GW15 77 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 H3BNG1 76 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 DEFB130BP0DP73 79 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 DEFB130AP0DP74 79 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 HOXA5P20719 270 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 FAM3BP58499 235 aaPredicted RBP4.13□□□□□ -1.75
ABCF1-207ENST00000542772 NANOS2P60321 138 aaKnown RBP4.13□□□□□ -1.75
ABCF1-207ENST00000542772 SLAQ13239 276 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 SPANXN1Q5VSR9 72 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 ATRAIDQ6UW56 229 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 Q6ZTC4 211 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 FRZBQ92765 325 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 ZNF479Q96JC4 524 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 FAM210BQ96KR6 192 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 PGLYRP4Q96LB8 373 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 SAMD10Q9BYL1 202 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms