RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PHLDA3Q9Y5J5 127 aa16.52■□□□□ 0.24
HOMER3-205ENST00000542541 FAM231BA6NCW3 169 aa16.52■□□□□ 0.23
HOMER3-205ENST00000542541 OR5AL1P0C617 328 aa16.52■□□□□ 0.23
HOMER3-205ENST00000542541 SSBP4Q9BWG4 385 aaPredicted RBP16.52■□□□□ 0.23
HOMER3-205ENST00000542541 GFRA4Q9GZZ7 299 aa16.52■□□□□ 0.23
HOMER3-205ENST00000542541 SCRT2Q9NQ03 307 aa16.52■□□□□ 0.23
HOMER3-205ENST00000542541 F2Z2F3 143 aa16.51■□□□□ 0.23
HOMER3-205ENST00000542541 SPINK4O60575 86 aa16.51■□□□□ 0.23
HOMER3-205ENST00000542541 IGLC6P0CF74 106 aa16.51■□□□□ 0.23
HOMER3-205ENST00000542541 PTH2Q96A98 100 aa16.51■□□□□ 0.23
HOMER3-205ENST00000542541 TRGV1A0A0A0MS02 117 aa16.5■□□□□ 0.23
HOMER3-205ENST00000542541 SNAI2O43623 268 aa16.5■□□□□ 0.23
HOMER3-205ENST00000542541 TPPP3Q9BW30 176 aa16.5■□□□□ 0.23
HOMER3-205ENST00000542541 SNAPINO95295 136 aa16.49■□□□□ 0.23
HOMER3-205ENST00000542541 SYT8Q8NBV8 401 aa16.49■□□□□ 0.23
HOMER3-205ENST00000542541 CLRN3Q8NCR9 226 aa16.49■□□□□ 0.23
HOMER3-205ENST00000542541 C11orf45Q8TAV5 145 aa16.49■□□□□ 0.23
HOMER3-205ENST00000542541 RASL10AQ92737 203 aa16.49■□□□□ 0.23
HOMER3-205ENST00000542541 ZNF876PQ49A33 203 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 NDUFAF3Q9BU61 184 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 CTDSP1Q9GZU7 261 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 EDA2RQ9HAV5 297 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 CELA1Q9UNI1 258 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 DEFB130BP0DP73 79 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 DEFB130AP0DP74 79 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 FOXA3P55318 350 aaPredicted RBP16.48■□□□□ 0.23
HOMER3-205ENST00000542541 DAD1P61803 113 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 RHEBQ15382 184 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 PIK3CD-AS1Q5SR53 167 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 Q6ZTI0 123 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 ZFP82Q8N141 532 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 GTSF1Q8WW33 167 aa16.48■□□□□ 0.23
HOMER3-205ENST00000542541 MRPL16Q9NX20 251 aaKnown RBP16.48■□□□□ 0.23
HOMER3-205ENST00000542541 GAGE12BA1L429 117 aa16.47■□□□□ 0.23
HOMER3-205ENST00000542541 GAGE7O76087 117 aa16.47■□□□□ 0.23
HOMER3-205ENST00000542541 GAGE12FP0CL80 117 aa16.47■□□□□ 0.23
HOMER3-205ENST00000542541 GAGE12GP0CL81 117 aa16.47■□□□□ 0.23
HOMER3-205ENST00000542541 GAGE12IP0CL82 117 aa16.47■□□□□ 0.23
HOMER3-205ENST00000542541 LYZL1Q6UWQ5 148 aa16.47■□□□□ 0.23
HOMER3-205ENST00000542541 LINC00612Q8N6U2 182 aa16.47■□□□□ 0.23
HOMER3-205ENST00000542541 C7orf77A4D0Y5 90 aa16.46■□□□□ 0.23
HOMER3-205ENST00000542541 SPANXN1Q5VSR9 72 aa16.46■□□□□ 0.23
HOMER3-205ENST00000542541 NAT8BQ9UHF3 227 aa16.46■□□□□ 0.23
HOMER3-205ENST00000542541 TRGV2A0A075B6R0 118 aa16.45■□□□□ 0.22
HOMER3-205ENST00000542541 HIGD1CA8MV81 97 aa16.45■□□□□ 0.22
HOMER3-205ENST00000542541 CTRLP40313 264 aa16.45■□□□□ 0.22
HOMER3-205ENST00000542541 CACNG7P62955 275 aa16.45■□□□□ 0.22
HOMER3-205ENST00000542541 WDR73Q6P4I2 378 aa16.45■□□□□ 0.22
HOMER3-205ENST00000542541 OR10AG1Q8NH19 301 aa16.45■□□□□ 0.22
HOMER3-205ENST00000542541 SMIM27A0A1W2PRY6 76 aa16.45■□□□□ 0.22
HOMER3-205ENST00000542541 M0R381 172 aa16.45■□□□□ 0.22
HOMER3-205ENST00000542541 BORCS7Q96B45 105 aa16.45■□□□□ 0.22
HOMER3-205ENST00000542541 A0A087WWC5 75 aa16.44■□□□□ 0.22
HOMER3-205ENST00000542541 DMRTA1Q5VZB9 504 aa16.44■□□□□ 0.22
HOMER3-205ENST00000542541 PGLYRP4Q96LB8 373 aa16.44■□□□□ 0.22
HOMER3-205ENST00000542541 C18orf15Q96N68 181 aa16.44■□□□□ 0.22
HOMER3-205ENST00000542541 RPS10P5Q9NQ39 176 aa16.44■□□□□ 0.22
HOMER3-205ENST00000542541 TMEM242Q9NWH2 141 aa16.44■□□□□ 0.22
HOMER3-205ENST00000542541 C12orf74Q32Q52 190 aa16.43■□□□□ 0.22
HOMER3-205ENST00000542541 MUC21A0A0G2JKD1 596 aa16.42■□□□□ 0.22
HOMER3-205ENST00000542541 MUC21A0A140T8X8 626 aa16.42■□□□□ 0.22
HOMER3-205ENST00000542541 NXPH4O95158 308 aa16.42■□□□□ 0.22
HOMER3-205ENST00000542541 CNFNQ9BYD5 112 aa16.42■□□□□ 0.22
HOMER3-205ENST00000542541 IGHV4-4A0A075B6R2 117 aa16.41■□□□□ 0.22
HOMER3-205ENST00000542541 A8MWV9 139 aa16.41■□□□□ 0.22
HOMER3-205ENST00000542541 NANOS2P60321 138 aaKnown RBP16.41■□□□□ 0.22
HOMER3-205ENST00000542541 NUP35Q8NFH5 326 aa16.41■□□□□ 0.22
HOMER3-205ENST00000542541 IMMP2LQ96T52 175 aa16.41■□□□□ 0.22
HOMER3-205ENST00000542541 STAB2Q8WWQ8 2551 aa16.41■□□□□ 0.22
HOMER3-205ENST00000542541 SSTP61278 116 aa16.41■□□□□ 0.22
HOMER3-205ENST00000542541 A0A1B0GUT8 65 aa16.4■□□□□ 0.22
HOMER3-205ENST00000542541 NTF3P20783 257 aa16.4■□□□□ 0.22
HOMER3-205ENST00000542541 ATP5G1P05496 136 aa16.39■□□□□ 0.21
HOMER3-205ENST00000542541 OR4C5Q8NGB2 326 aa16.39■□□□□ 0.21
HOMER3-205ENST00000542541 MUC4Q99102 2169 aa16.39■□□□□ 0.21
HOMER3-205ENST00000542541 TRAV4A0A0B4J268 109 aa16.38■□□□□ 0.21
HOMER3-205ENST00000542541 CIDEAO60543 219 aa16.38■□□□□ 0.21
HOMER3-205ENST00000542541 TWIST1Q15672 202 aa16.38■□□□□ 0.21
HOMER3-205ENST00000542541 KCNIP4Q6PIL6 250 aa16.37■□□□□ 0.21
HOMER3-205ENST00000542541 Q6ZTC4 211 aa16.37■□□□□ 0.21
HOMER3-205ENST00000542541 RS1O15537 224 aa16.37■□□□□ 0.21
HOMER3-205ENST00000542541 TRGC1P0CF51 173 aa16.37■□□□□ 0.21
HOMER3-205ENST00000542541 S100PP25815 95 aa16.37■□□□□ 0.21
HOMER3-205ENST00000542541 RIGQ13278 110 aa16.37■□□□□ 0.21
HOMER3-205ENST00000542541 CFAP126Q5VTH2 177 aa16.37■□□□□ 0.21
HOMER3-205ENST00000542541 FAM3BP58499 235 aaPredicted RBP16.36■□□□□ 0.21
HOMER3-205ENST00000542541 AP1S3Q96PC3 154 aa16.36■□□□□ 0.21
HOMER3-205ENST00000542541 SMIM15Q7Z3B0 74 aa16.35■□□□□ 0.21
HOMER3-205ENST00000542541 POM121L12Q8N7R1 296 aa16.35■□□□□ 0.21
HOMER3-205ENST00000542541 WWC2-AS2Q96NR7 200 aa16.35■□□□□ 0.21
HOMER3-205ENST00000542541 MSRB1Q9NZV6 116 aa16.35■□□□□ 0.21
HOMER3-205ENST00000542541 IGHV3-53P01767 116 aa16.34■□□□□ 0.21
HOMER3-205ENST00000542541 SMIM17P0DL12 118 aa16.34■□□□□ 0.21
HOMER3-205ENST00000542541 JPT2Q9H910 190 aa16.34■□□□□ 0.21
HOMER3-205ENST00000542541 TRAV10A0A0B4J240 114 aa16.34■□□□□ 0.21
HOMER3-205ENST00000542541 A0A1B0GW15 77 aa16.34■□□□□ 0.21
HOMER3-205ENST00000542541 RHODO00212 210 aa16.34■□□□□ 0.21
HOMER3-205ENST00000542541 HTN3P15516 51 aa16.34■□□□□ 0.21
HOMER3-205ENST00000542541 ZFP2Q6ZN57 461 aa16.34■□□□□ 0.21
HOMER3-205ENST00000542541 ZNF479Q96JC4 524 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms